EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000016813 (Gene tree)
Gene ID: 108425050
Gene Symbol: -
Alias: -
Full Name: calreticulin-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 7168 bases
Position: chrKV575314.1:4713265-4720432
Accession: 108425050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030202	Calreticulin	PF00262.18	6.5e-82	1	2
ENSPNAP00000030202	Calreticulin	PF00262.18	6.5e-82	2	2
ENSPNAP00000011137	Calreticulin	PF00262.18	8.2e-63	1	2
ENSPNAP00000011137	Calreticulin	PF00262.18	8.2e-63	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018033	-	3359	XM_017693426	ENSPNAP00000030202	421 (aa)	XP_017548915	UPI00081439F3
ENSPNAT00000036007	-	1122	-	ENSPNAP00000011137	373 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000016813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016813's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000016813	-	79	79.217	ENSPNAG00000017127	CALR3	85	76.124
ENSPNAG00000016813	-	84	74.576	ENSPNAG00000025330	calr3b	74	74.302
ENSPNAG00000016813	-	85	34.430	ENSPNAG00000012244	si:ch211-274f20.2	80	34.026
ENSPNAG00000016813	-	79	38.500	ENSPNAG00000003056	clgn	74	37.912
ENSPNAG00000016813	-	69	40.058	ENSPNAG00000019082	canx	55	40.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016813	-	100	88.889	ENSAMXG00000018577	-	86	89.807	Astyanax_mexicanus
ENSPNAG00000016813	-	82	79.827	ENSCAFG00000017093	CALR	89	77.348	Canis_familiaris
ENSPNAG00000016813	-	86	77.686	ENSCPBG00000023916	-	85	83.758	Chrysemys_picta_bellii
ENSPNAG00000016813	-	86	74.309	ENSDARG00000103979	calr3a	86	74.309	Danio_rerio
ENSPNAG00000016813	-	77	34.005	FBgn0264077	Cnx14D	62	33.831	Drosophila_melanogaster
ENSPNAG00000016813	-	89	66.844	FBgn0005585	Calr	88	66.942	Drosophila_melanogaster
ENSPNAG00000016813	-	86	69.421	ENSEBUG00000008568	calr3a	84	68.232	Eptatretus_burgeri
ENSPNAG00000016813	-	100	75.772	ENSELUG00000008294	-	86	77.624	Esox_lucius
ENSPNAG00000016813	-	100	77.546	ENSFHEG00000000123	-	85	79.189	Fundulus_heteroclitus
ENSPNAG00000016813	-	86	85.912	ENSMAMG00000003716	-	84	85.912	Mastacembelus_armatus
ENSPNAG00000016813	-	100	80.045	ENSMMOG00000020031	-	83	85.165	Mola_mola
ENSPNAG00000016813	-	82	80.403	ENSMLUG00000012776	-	87	77.901	Myotis_lucifugus
ENSPNAG00000016813	-	84	84.395	ENSORLG00000017171	-	84	84.395	Oryzias_latipes
ENSPNAG00000016813	-	86	85.083	ENSOMEG00000010424	-	85	85.083	Oryzias_melastigma
ENSPNAG00000016813	-	79	83.284	ENSPSIG00000012928	-	85	83.533	Pelodiscus_sinensis
ENSPNAG00000016813	-	69	40.634	ENSPSIG00000003895	-	60	39.542	Pelodiscus_sinensis
ENSPNAG00000016813	-	81	36.957	ENSPSIG00000009344	-	63	32.634	Pelodiscus_sinensis
ENSPNAG00000016813	-	89	72.074	ENSSMAG00000005047	calr3a	81	66.947	Scophthalmus_maximus
ENSPNAG00000016813	-	82	36.341	ENSSDUG00000002378	-	54	33.252	Seriola_dumerili
ENSPNAG00000016813	-	83	35.627	ENSSLDG00000020527	-	70	31.840	Seriola_lalandi_dorsalis
ENSPNAG00000016813	-	90	85.185	ENSTRUG00000004597	-	84	85.359	Takifugu_rubripes
ENSPNAG00000016813	-	79	37.531	ENSTRUG00000003449	-	54	33.816	Takifugu_rubripes
ENSPNAG00000016813	-	86	74.380	ENSXETG00000007937	calr	87	74.586	Xenopus_tropicalis