EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017189 (Gene tree)
Gene ID: 108441294
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 200-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 7448 bases
Position: chrKV575682.1:10034-17481
Accession: 108441294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030460	zf-C2H2	PF00096.26	6.1e-13	1	2
ENSPNAP00000030460	zf-C2H2	PF00096.26	6.1e-13	2	2
ENSPNAP00000030460	zf-met	PF12874.7	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018613	-	3096	XM_017720743	ENSPNAP00000030460	342 (aa)	XP_017576232	UPI0008148434

Gene Model

Click here to download ENSPNAG00000017189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017189	-	53	41.538	ENSPNAG00000006821	-	89	41.026
ENSPNAG00000017189	-	99	58.228	ENSPNAG00000005946	-	98	58.228
ENSPNAG00000017189	-	97	45.570	ENSPNAG00000003616	si:dkey-7l6.3	97	45.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017189	-	62	42.857	ENSACIG00000017050	-	96	42.857	Amphilophus_citrinellus
ENSPNAG00000017189	-	57	53.846	ENSAMXG00000040806	-	79	53.846	Astyanax_mexicanus
ENSPNAG00000017189	-	72	46.835	ENSAMXG00000032457	-	90	46.835	Astyanax_mexicanus
ENSPNAG00000017189	-	73	52.083	ENSAMXG00000009558	-	86	52.083	Astyanax_mexicanus
ENSPNAG00000017189	-	57	47.222	ENSAMXG00000032212	-	86	47.222	Astyanax_mexicanus
ENSPNAG00000017189	-	54	40.506	ENSCSEG00000003757	-	94	42.373	Cynoglossus_semilaevis
ENSPNAG00000017189	-	59	44.304	ENSCVAG00000007073	-	70	44.304	Cyprinodon_variegatus
ENSPNAG00000017189	-	95	45.455	ENSELUG00000001968	-	69	45.455	Esox_lucius
ENSPNAG00000017189	-	94	41.772	ENSELUG00000016397	-	89	41.772	Esox_lucius
ENSPNAG00000017189	-	98	45.570	ENSELUG00000018405	-	94	48.718	Esox_lucius
ENSPNAG00000017189	-	87	41.772	ENSHBUG00000002961	-	86	41.772	Haplochromis_burtoni
ENSPNAG00000017189	-	57	45.570	ENSIPUG00000023688	-	90	48.750	Ictalurus_punctatus
ENSPNAG00000017189	-	50	41.250	ENSKMAG00000000795	-	98	44.304	Kryptolebias_marmoratus
ENSPNAG00000017189	-	68	48.101	ENSMZEG00005021779	-	87	48.101	Maylandia_zebra
ENSPNAG00000017189	-	86	47.541	ENSONIG00000018767	-	99	47.541	Oreochromis_niloticus
ENSPNAG00000017189	-	73	44.944	ENSONIG00000014850	-	94	44.944	Oreochromis_niloticus
ENSPNAG00000017189	-	93	46.667	ENSONIG00000015502	-	99	46.667	Oreochromis_niloticus
ENSPNAG00000017189	-	51	41.772	ENSORLG00000024174	-	75	41.772	Oryzias_latipes
ENSPNAG00000017189	-	85	44.872	ENSPKIG00000012069	-	97	45.455	Paramormyrops_kingsleyae
ENSPNAG00000017189	-	50	47.368	ENSPMGG00000018639	-	95	45.783	Periophthalmus_magnuspinnatus
ENSPNAG00000017189	-	57	41.772	ENSPMGG00000010453	-	77	41.772	Periophthalmus_magnuspinnatus
ENSPNAG00000017189	-	92	41.772	ENSPNYG00000018372	-	96	41.772	Pundamilia_nyererei
ENSPNAG00000017189	-	65	44.304	ENSXCOG00000016860	-	96	44.304	Xiphophorus_couchianus
ENSPNAG00000017189	-	64	46.250	ENSXMAG00000027906	-	95	45.455	Xiphophorus_maculatus