EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017222 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 7696 bases
Position: chrKV575295.1:61046-68741
Accession: 108440328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000011548	zf-C2H2	PF00096.26	4.2e-30	1	5
ENSPNAP00000011548	zf-C2H2	PF00096.26	4.2e-30	2	5
ENSPNAP00000011548	zf-C2H2	PF00096.26	4.2e-30	3	5
ENSPNAP00000011548	zf-C2H2	PF00096.26	4.2e-30	4	5
ENSPNAP00000011548	zf-C2H2	PF00096.26	4.2e-30	5	5
ENSPNAP00000011548	zf-met	PF12874.7	7.8e-12	1	2
ENSPNAP00000011548	zf-met	PF12874.7	7.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018548	-	1791	XM_017719138	ENSPNAP00000011548	596 (aa)	XP_017574627	-

Gene Model

Click here to download ENSPNAG00000017222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017222	patz1	73	31.164	ENSPNAG00000018437	-	89	31.164
ENSPNAG00000017222	patz1	63	34.132	ENSPNAG00000012138	-	88	34.132
ENSPNAG00000017222	patz1	64	30.169	ENSPNAG00000021765	-	93	30.169
ENSPNAG00000017222	patz1	63	36.747	ENSPNAG00000024704	-	92	36.747
ENSPNAG00000017222	patz1	63	31.715	ENSPNAG00000017479	-	82	31.715
ENSPNAG00000017222	patz1	67	32.090	ENSPNAG00000021831	-	96	32.090
ENSPNAG00000017222	patz1	52	32.967	ENSPNAG00000005946	-	84	32.323
ENSPNAG00000017222	patz1	66	37.234	ENSPNAG00000008386	zbtb34	80	37.234
ENSPNAG00000017222	patz1	61	37.158	ENSPNAG00000026181	prdm5	71	30.964
ENSPNAG00000017222	patz1	63	32.099	ENSPNAG00000008480	-	93	32.099
ENSPNAG00000017222	patz1	67	30.980	ENSPNAG00000009164	-	93	30.980
ENSPNAG00000017222	patz1	56	34.483	ENSPNAG00000011705	-	73	34.483
ENSPNAG00000017222	patz1	62	36.723	ENSPNAG00000029997	-	82	37.126
ENSPNAG00000017222	patz1	63	37.436	ENSPNAG00000011660	-	56	37.056
ENSPNAG00000017222	patz1	61	30.325	ENSPNAG00000005829	-	78	30.332
ENSPNAG00000017222	patz1	68	35.238	ENSPNAG00000017138	znf236	96	34.831
ENSPNAG00000017222	patz1	69	33.613	ENSPNAG00000002287	-	81	35.329
ENSPNAG00000017222	patz1	60	31.518	ENSPNAG00000018644	-	89	31.518
ENSPNAG00000017222	patz1	61	38.922	ENSPNAG00000000219	-	86	38.922
ENSPNAG00000017222	patz1	61	32.222	ENSPNAG00000016034	zbtb41	71	32.222
ENSPNAG00000017222	patz1	73	34.118	ENSPNAG00000007265	-	87	34.270
ENSPNAG00000017222	patz1	65	31.667	ENSPNAG00000014782	zbtb16a	50	37.037
ENSPNAG00000017222	patz1	67	31.496	ENSPNAG00000014492	-	89	31.496
ENSPNAG00000017222	patz1	61	30.242	ENSPNAG00000006821	-	86	37.195
ENSPNAG00000017222	patz1	68	30.990	ENSPNAG00000012495	-	81	30.990
ENSPNAG00000017222	patz1	63	33.465	ENSPNAG00000000066	-	78	33.465
ENSPNAG00000017222	patz1	68	31.210	ENSPNAG00000019534	-	82	31.210
ENSPNAG00000017222	patz1	68	30.224	ENSPNAG00000009176	-	85	30.224
ENSPNAG00000017222	patz1	65	30.526	ENSPNAG00000008653	-	98	31.615
ENSPNAG00000017222	patz1	63	37.278	ENSPNAG00000000783	-	97	31.102
ENSPNAG00000017222	patz1	88	31.154	ENSPNAG00000010752	-	86	35.542
ENSPNAG00000017222	patz1	63	30.303	ENSPNAG00000000303	-	60	30.303
ENSPNAG00000017222	patz1	66	32.031	ENSPNAG00000003017	-	88	32.031
ENSPNAG00000017222	patz1	67	31.429	ENSPNAG00000003526	-	77	31.429
ENSPNAG00000017222	patz1	56	34.545	ENSPNAG00000021863	-	82	34.545
ENSPNAG00000017222	patz1	67	36.458	ENSPNAG00000016025	-	95	36.458
ENSPNAG00000017222	patz1	61	31.429	ENSPNAG00000019338	-	93	32.026
ENSPNAG00000017222	patz1	69	32.424	ENSPNAG00000002244	-	81	32.069
ENSPNAG00000017222	patz1	64	30.189	ENSPNAG00000016478	-	99	30.189
ENSPNAG00000017222	patz1	76	36.765	ENSPNAG00000025211	-	57	37.226
ENSPNAG00000017222	patz1	63	30.932	ENSPNAG00000012154	-	85	33.696
ENSPNAG00000017222	patz1	61	37.569	ENSPNAG00000018395	-	61	37.569
ENSPNAG00000017222	patz1	64	37.725	ENSPNAG00000029386	-	85	31.163
ENSPNAG00000017222	patz1	75	32.069	ENSPNAG00000021075	-	95	32.069
ENSPNAG00000017222	patz1	63	36.747	ENSPNAG00000025570	-	80	36.747
ENSPNAG00000017222	patz1	64	30.288	ENSPNAG00000003919	-	92	30.165
ENSPNAG00000017222	patz1	54	30.769	ENSPNAG00000025882	-	59	30.769
ENSPNAG00000017222	patz1	57	32.677	ENSPNAG00000017455	-	77	37.778
ENSPNAG00000017222	patz1	63	32.595	ENSPNAG00000016045	-	71	32.595
ENSPNAG00000017222	patz1	63	30.000	ENSPNAG00000006535	znf319b	79	31.579
ENSPNAG00000017222	patz1	64	34.211	ENSPNAG00000003702	-	81	34.211
ENSPNAG00000017222	patz1	63	31.343	ENSPNAG00000005914	-	76	31.615
ENSPNAG00000017222	patz1	63	34.392	ENSPNAG00000011625	-	85	34.392
ENSPNAG00000017222	patz1	71	30.435	ENSPNAG00000024014	znf131	67	30.435
ENSPNAG00000017222	patz1	67	30.337	ENSPNAG00000002209	-	86	30.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017222	patz1	99	59.486	ENSG00000100105	PATZ1	84	60.454	Homo_sapiens
ENSPNAG00000017222	patz1	100	59.968	ENSAPOG00000018447	patz1	89	66.736	Acanthochromis_polyacanthus
ENSPNAG00000017222	patz1	99	58.599	ENSAMEG00000007074	PATZ1	84	60.292	Ailuropoda_melanoleuca
ENSPNAG00000017222	patz1	100	62.903	ENSACIG00000016779	patz1	87	62.903	Amphilophus_citrinellus
ENSPNAG00000017222	patz1	100	63.924	ENSAPEG00000013354	patz1	88	63.924	Amphiprion_percula
ENSPNAG00000017222	patz1	100	63.371	ENSATEG00000011260	patz1	88	63.371	Anabas_testudineus
ENSPNAG00000017222	patz1	99	58.007	ENSAPLG00000003934	PATZ1	99	58.007	Anas_platyrhynchos
ENSPNAG00000017222	patz1	99	59.486	ENSANAG00000029603	PATZ1	84	60.454	Aotus_nancymaae
ENSPNAG00000017222	patz1	100	73.570	ENSAMXG00000002273	patz1	88	74.343	Astyanax_mexicanus
ENSPNAG00000017222	patz1	99	58.439	ENSBTAG00000005478	PATZ1	84	60.130	Bos_taurus
ENSPNAG00000017222	patz1	99	59.486	ENSCJAG00000010978	PATZ1	84	60.454	Callithrix_jacchus
ENSPNAG00000017222	patz1	99	58.599	ENSCAFG00000013087	PATZ1	84	60.292	Canis_familiaris
ENSPNAG00000017222	patz1	99	58.439	ENSCHIG00000020203	PATZ1	84	60.130	Capra_hircus
ENSPNAG00000017222	patz1	99	59.325	ENSTSYG00000033183	PATZ1	84	60.292	Carlito_syrichta
ENSPNAG00000017222	patz1	99	59.486	ENSCCAG00000028772	PATZ1	84	60.454	Cebus_capucinus
ENSPNAG00000017222	patz1	99	59.325	ENSCATG00000006101	PATZ1	84	60.292	Cercocebus_atys
ENSPNAG00000017222	patz1	99	59.150	ENSCPBG00000011277	PATZ1	84	59.150	Chrysemys_picta_bellii
ENSPNAG00000017222	patz1	99	59.325	ENSCANG00000024972	PATZ1	84	60.292	Colobus_angolensis_palliatus
ENSPNAG00000017222	patz1	99	57.327	ENSCGRG00001004071	Patz1	84	58.279	Cricetulus_griseus_chok1gshd
ENSPNAG00000017222	patz1	99	58.937	ENSCGRG00000004814	Patz1	90	59.903	Cricetulus_griseus_crigri
ENSPNAG00000017222	patz1	100	59.259	ENSCSEG00000001385	patz1	88	59.259	Cynoglossus_semilaevis
ENSPNAG00000017222	patz1	100	63.124	ENSCVAG00000007684	patz1	88	63.124	Cyprinodon_variegatus
ENSPNAG00000017222	patz1	100	64.516	ENSDARG00000076584	patz1	87	64.516	Danio_rerio
ENSPNAG00000017222	patz1	89	57.117	ENSDNOG00000003183	PATZ1	83	58.984	Dasypus_novemcinctus
ENSPNAG00000017222	patz1	99	60.552	ENSDORG00000023834	Patz1	84	60.616	Dipodomys_ordii
ENSPNAG00000017222	patz1	99	59.164	ENSECAG00000025030	PATZ1	84	60.130	Equus_caballus
ENSPNAG00000017222	patz1	100	59.133	ENSELUG00000002333	patz1	90	65.762	Esox_lucius
ENSPNAG00000017222	patz1	99	58.599	ENSFCAG00000030253	PATZ1	84	60.292	Felis_catus
ENSPNAG00000017222	patz1	99	58.007	ENSFALG00000007450	PATZ1	98	58.007	Ficedula_albicollis
ENSPNAG00000017222	patz1	99	56.726	ENSFDAG00000005614	PATZ1	87	56.796	Fukomys_damarensis
ENSPNAG00000017222	patz1	100	64.620	ENSFHEG00000014755	patz1	87	64.459	Fundulus_heteroclitus
ENSPNAG00000017222	patz1	100	58.814	ENSGMOG00000001062	patz1	88	58.974	Gadus_morhua
ENSPNAG00000017222	patz1	99	58.170	ENSGALG00000006934	PATZ1	83	58.170	Gallus_gallus
ENSPNAG00000017222	patz1	100	59.177	ENSGAFG00000010053	patz1	87	59.177	Gambusia_affinis
ENSPNAG00000017222	patz1	99	58.891	ENSGAGG00000003214	PATZ1	99	58.891	Gopherus_agassizii
ENSPNAG00000017222	patz1	99	59.325	ENSGGOG00000017171	PATZ1	84	60.292	Gorilla_gorilla
ENSPNAG00000017222	patz1	100	56.913	ENSHCOG00000017644	patz1	89	56.598	Hippocampus_comes
ENSPNAG00000017222	patz1	100	67.468	ENSIPUG00000017653	patz1	87	67.468	Ictalurus_punctatus
ENSPNAG00000017222	patz1	99	58.599	ENSSTOG00000020707	PATZ1	84	60.292	Ictidomys_tridecemlineatus
ENSPNAG00000017222	patz1	99	59.968	ENSJJAG00000015259	Patz1	84	59.968	Jaculus_jaculus
ENSPNAG00000017222	patz1	100	62.561	ENSKMAG00000008157	patz1	87	63.047	Kryptolebias_marmoratus
ENSPNAG00000017222	patz1	99	60.065	ENSLAFG00000002317	PATZ1	86	60.130	Loxodonta_africana
ENSPNAG00000017222	patz1	99	59.325	ENSMFAG00000040968	PATZ1	84	60.292	Macaca_fascicularis
ENSPNAG00000017222	patz1	99	59.325	ENSMNEG00000037588	PATZ1	84	60.292	Macaca_nemestrina
ENSPNAG00000017222	patz1	99	59.325	ENSMLEG00000030938	PATZ1	84	60.292	Mandrillus_leucophaeus
ENSPNAG00000017222	patz1	100	63.820	ENSMAMG00000023652	patz1	89	63.820	Mastacembelus_armatus
ENSPNAG00000017222	patz1	99	54.739	ENSMGAG00000008439	PATZ1	99	54.739	Meleagris_gallopavo
ENSPNAG00000017222	patz1	99	59.325	ENSMAUG00000004129	Patz1	84	60.292	Mesocricetus_auratus
ENSPNAG00000017222	patz1	99	59.903	ENSMICG00000005430	PATZ1	84	60.130	Microcebus_murinus
ENSPNAG00000017222	patz1	99	59.325	ENSMOCG00000014488	Patz1	84	60.292	Microtus_ochrogaster
ENSPNAG00000017222	patz1	77	60.297	ENSMMOG00000021679	patz1	57	60.297	Mola_mola
ENSPNAG00000017222	patz1	100	62.761	ENSMALG00000021172	patz1	88	62.761	Monopterus_albus
ENSPNAG00000017222	patz1	99	59.486	MGP_CAROLIEiJ_G0016007	Patz1	84	60.454	Mus_caroli
ENSPNAG00000017222	patz1	99	59.486	ENSMUSG00000020453	Patz1	84	60.454	Mus_musculus
ENSPNAG00000017222	patz1	99	59.486	MGP_PahariEiJ_G0016884	Patz1	84	60.454	Mus_pahari
ENSPNAG00000017222	patz1	99	59.486	MGP_SPRETEiJ_G0016846	Patz1	84	60.454	Mus_spretus
ENSPNAG00000017222	patz1	99	58.599	ENSMLUG00000009942	PATZ1	84	60.292	Myotis_lucifugus
ENSPNAG00000017222	patz1	99	59.903	ENSNGAG00000010268	Patz1	84	60.292	Nannospalax_galili
ENSPNAG00000017222	patz1	100	63.867	ENSNBRG00000016032	patz1	88	63.867	Neolamprologus_brichardi
ENSPNAG00000017222	patz1	76	62.121	ENSMEUG00000016293	PATZ1	92	62.121	Notamacropus_eugenii
ENSPNAG00000017222	patz1	99	60.065	ENSODEG00000003589	PATZ1	84	60.065	Octodon_degus
ENSPNAG00000017222	patz1	100	60.630	ENSONIG00000004248	patz1	87	60.630	Oreochromis_niloticus
ENSPNAG00000017222	patz1	99	59.295	ENSOANG00000014654	PATZ1	85	59.581	Ornithorhynchus_anatinus
ENSPNAG00000017222	patz1	100	66.745	ENSORLG00020010937	patz1	88	63.323	Oryzias_latipes_hni
ENSPNAG00000017222	patz1	100	63.166	ENSORLG00015007396	patz1	88	63.166	Oryzias_latipes_hsok
ENSPNAG00000017222	patz1	100	58.637	ENSOMEG00000006636	patz1	87	58.637	Oryzias_melastigma
ENSPNAG00000017222	patz1	99	59.164	ENSOGAG00000027905	PATZ1	84	60.130	Otolemur_garnettii
ENSPNAG00000017222	patz1	99	59.325	ENSPPAG00000033227	PATZ1	84	60.292	Pan_paniscus
ENSPNAG00000017222	patz1	99	58.599	ENSPPRG00000001573	PATZ1	84	60.292	Panthera_pardus
ENSPNAG00000017222	patz1	99	58.758	ENSPTIG00000007937	PATZ1	89	60.292	Panthera_tigris_altaica
ENSPNAG00000017222	patz1	99	59.325	ENSPTRG00000014268	PATZ1	84	60.292	Pan_troglodytes
ENSPNAG00000017222	patz1	99	59.325	ENSPANG00000006821	PATZ1	84	60.292	Papio_anubis
ENSPNAG00000017222	patz1	100	64.960	ENSPKIG00000019584	patz1	88	65.440	Paramormyrops_kingsleyae
ENSPNAG00000017222	patz1	80	57.933	ENSPSIG00000011562	-	99	64.183	Pelodiscus_sinensis
ENSPNAG00000017222	patz1	71	57.710	ENSPSIG00000016553	-	90	57.710	Pelodiscus_sinensis
ENSPNAG00000017222	patz1	100	59.395	ENSPMGG00000010196	patz1	88	59.395	Periophthalmus_magnuspinnatus
ENSPNAG00000017222	patz1	99	60.292	ENSPEMG00000005321	Patz1	84	60.292	Peromyscus_maniculatus_bairdii
ENSPNAG00000017222	patz1	100	62.862	ENSPLAG00000010425	patz1	100	62.560	Poecilia_latipinna
ENSPNAG00000017222	patz1	100	59.125	ENSPMEG00000000255	patz1	88	58.859	Poecilia_mexicana
ENSPNAG00000017222	patz1	100	62.500	ENSPREG00000002440	patz1	88	62.205	Poecilia_reticulata
ENSPNAG00000017222	patz1	99	59.325	ENSPPYG00000011732	PATZ1	84	60.292	Pongo_abelii
ENSPNAG00000017222	patz1	99	59.512	ENSPCOG00000019729	PATZ1	84	59.740	Propithecus_coquereli
ENSPNAG00000017222	patz1	99	58.599	ENSPVAG00000001749	PATZ1	84	60.292	Pteropus_vampyrus
ENSPNAG00000017222	patz1	100	64.455	ENSPNYG00000013542	patz1	88	64.455	Pundamilia_nyererei
ENSPNAG00000017222	patz1	99	59.325	ENSRBIG00000044231	PATZ1	84	60.292	Rhinopithecus_bieti
ENSPNAG00000017222	patz1	99	59.325	ENSRROG00000037155	PATZ1	84	60.292	Rhinopithecus_roxellana
ENSPNAG00000017222	patz1	99	59.486	ENSSBOG00000003894	PATZ1	84	60.454	Saimiri_boliviensis_boliviensis
ENSPNAG00000017222	patz1	67	94.643	ENSSFOG00015013244	patz1	67	94.643	Scleropages_formosus
ENSPNAG00000017222	patz1	99	58.497	ENSSPUG00000015298	PATZ1	82	58.497	Sphenodon_punctatus
ENSPNAG00000017222	patz1	99	58.852	ENSSSCG00000010027	PATZ1	99	60.390	Sus_scrofa
ENSPNAG00000017222	patz1	100	63.665	ENSTRUG00000015366	patz1	88	63.665	Takifugu_rubripes
ENSPNAG00000017222	patz1	99	58.599	ENSTTRG00000010279	PATZ1	84	60.292	Tursiops_truncatus
ENSPNAG00000017222	patz1	99	54.140	ENSUAMG00000015014	PATZ1	83	54.619	Ursus_americanus
ENSPNAG00000017222	patz1	99	55.702	ENSXETG00000004190	patz1	87	56.860	Xenopus_tropicalis
ENSPNAG00000017222	patz1	100	59.177	ENSXMAG00000015531	patz1	88	58.718	Xiphophorus_maculatus