EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000017225 (Gene tree)
Gene ID: 108434706
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 31966 bases
Position: chrKV575449.1:986208-1018173
Accession: 108434706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030478	Suf	PF05843.14	2.9e-07	1	1
ENSPNAP00000030478	S1	PF00575.23	7.3e-59	1	4
ENSPNAP00000030478	S1	PF00575.23	7.3e-59	2	4
ENSPNAP00000030478	S1	PF00575.23	7.3e-59	3	4
ENSPNAP00000030478	S1	PF00575.23	7.3e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018560	-	5345	XM_017710045	ENSPNAP00000030478	1736 (aa)	XP_017565534	-

Gene Model

Click here to download ENSPNAG00000017225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017225	pdcd11	99	45.836	ENSG00000148843	PDCD11	95	45.470	Homo_sapiens
ENSPNAG00000017225	pdcd11	100	57.847	ENSAPOG00000015629	pdcd11	95	57.789	Acanthochromis_polyacanthus
ENSPNAG00000017225	pdcd11	99	46.154	ENSAMEG00000017935	PDCD11	95	46.205	Ailuropoda_melanoleuca
ENSPNAG00000017225	pdcd11	100	57.699	ENSAOCG00000015287	pdcd11	95	57.470	Amphiprion_ocellaris
ENSPNAG00000017225	pdcd11	52	55.840	ENSAPEG00000020240	pdcd11	88	55.840	Amphiprion_percula
ENSPNAG00000017225	pdcd11	99	57.593	ENSATEG00000021043	pdcd11	95	57.593	Anabas_testudineus
ENSPNAG00000017225	pdcd11	99	45.149	ENSAPLG00000010301	PDCD11	95	45.245	Anas_platyrhynchos
ENSPNAG00000017225	pdcd11	99	44.835	ENSACAG00000004796	PDCD11	95	44.830	Anolis_carolinensis
ENSPNAG00000017225	pdcd11	99	46.111	ENSANAG00000034576	PDCD11	95	46.025	Aotus_nancymaae
ENSPNAG00000017225	pdcd11	99	76.490	ENSACLG00000018236	pdcd11	96	70.968	Astatotilapia_calliptera
ENSPNAG00000017225	pdcd11	99	62.031	ENSAMXG00000005458	pdcd11	93	71.135	Astyanax_mexicanus
ENSPNAG00000017225	pdcd11	99	45.784	ENSBTAG00000009715	PDCD11	95	45.358	Bos_taurus
ENSPNAG00000017225	pdcd11	99	45.582	ENSCJAG00000018257	PDCD11	95	45.551	Callithrix_jacchus
ENSPNAG00000017225	pdcd11	99	46.239	ENSCAFG00000010411	PDCD11	95	45.962	Canis_familiaris
ENSPNAG00000017225	pdcd11	99	46.966	ENSCAFG00020010369	PDCD11	95	46.685	Canis_lupus_dingo
ENSPNAG00000017225	pdcd11	99	45.815	ENSCHIG00000025218	PDCD11	95	45.500	Capra_hircus
ENSPNAG00000017225	pdcd11	99	44.740	ENSTSYG00000033423	PDCD11	97	44.683	Carlito_syrichta
ENSPNAG00000017225	pdcd11	96	42.298	ENSCAPG00000005386	PDCD11	99	41.961	Cavia_aperea
ENSPNAG00000017225	pdcd11	99	45.700	ENSCPOG00000010957	PDCD11	98	45.127	Cavia_porcellus
ENSPNAG00000017225	pdcd11	99	45.887	ENSCCAG00000018950	PDCD11	95	45.913	Cebus_capucinus
ENSPNAG00000017225	pdcd11	99	45.840	ENSCATG00000044331	PDCD11	95	45.419	Cercocebus_atys
ENSPNAG00000017225	pdcd11	99	45.404	ENSCLAG00000001029	PDCD11	95	45.132	Chinchilla_lanigera
ENSPNAG00000017225	pdcd11	99	45.892	ENSCSAG00000005346	PDCD11	95	45.470	Chlorocebus_sabaeus
ENSPNAG00000017225	pdcd11	73	72.093	ENSCHOG00000004796	PDCD11	70	72.093	Choloepus_hoffmanni
ENSPNAG00000017225	pdcd11	100	43.407	ENSCPBG00000024487	PDCD11	97	62.573	Chrysemys_picta_bellii
ENSPNAG00000017225	pdcd11	91	33.152	ENSCING00000002715	-	82	41.065	Ciona_intestinalis
ENSPNAG00000017225	pdcd11	99	45.973	ENSCANG00000043300	PDCD11	95	45.439	Colobus_angolensis_palliatus
ENSPNAG00000017225	pdcd11	99	45.123	ENSCGRG00001006458	Pdcd11	95	45.062	Cricetulus_griseus_chok1gshd
ENSPNAG00000017225	pdcd11	99	44.986	ENSCGRG00000003583	Pdcd11	95	44.924	Cricetulus_griseus_crigri
ENSPNAG00000017225	pdcd11	97	55.700	ENSCSEG00000010739	pdcd11	94	55.912	Cynoglossus_semilaevis
ENSPNAG00000017225	pdcd11	96	58.165	ENSCVAG00000018903	pdcd11	80	73.761	Cyprinodon_variegatus
ENSPNAG00000017225	pdcd11	100	60.387	ENSDARG00000052480	pdcd11	95	60.171	Danio_rerio
ENSPNAG00000017225	pdcd11	99	45.764	ENSDNOG00000013838	PDCD11	95	45.460	Dasypus_novemcinctus
ENSPNAG00000017225	pdcd11	99	45.087	ENSDORG00000010420	Pdcd11	95	45.444	Dipodomys_ordii
ENSPNAG00000017225	pdcd11	61	32.857	FBgn0039182	CG5728	67	35.030	Drosophila_melanogaster
ENSPNAG00000017225	pdcd11	93	57.143	ENSETEG00000000813	PDCD11	94	53.061	Echinops_telfairi
ENSPNAG00000017225	pdcd11	75	48.013	ENSEBUG00000002358	-	87	47.697	Eptatretus_burgeri
ENSPNAG00000017225	pdcd11	99	46.351	ENSEASG00005015159	PDCD11	99	46.029	Equus_asinus_asinus
ENSPNAG00000017225	pdcd11	99	46.532	ENSECAG00000020507	PDCD11	95	46.162	Equus_caballus
ENSPNAG00000017225	pdcd11	99	50.000	ENSEEUG00000009245	PDCD11	88	50.000	Erinaceus_europaeus
ENSPNAG00000017225	pdcd11	100	57.372	ENSELUG00000004211	pdcd11	95	57.258	Esox_lucius
ENSPNAG00000017225	pdcd11	99	46.119	ENSFCAG00000002384	PDCD11	95	46.171	Felis_catus
ENSPNAG00000017225	pdcd11	100	45.285	ENSFALG00000008775	PDCD11	95	44.994	Ficedula_albicollis
ENSPNAG00000017225	pdcd11	99	45.297	ENSFDAG00000009532	PDCD11	95	45.210	Fukomys_damarensis
ENSPNAG00000017225	pdcd11	89	77.303	ENSFHEG00000022997	pdcd11	90	77.303	Fundulus_heteroclitus
ENSPNAG00000017225	pdcd11	93	51.429	ENSGMOG00000004186	pdcd11	89	51.180	Gadus_morhua
ENSPNAG00000017225	pdcd11	75	43.180	ENSGALG00000008265	PDCD11	93	42.700	Gallus_gallus
ENSPNAG00000017225	pdcd11	96	61.639	ENSGAFG00000012806	pdcd11	97	61.080	Gambusia_affinis
ENSPNAG00000017225	pdcd11	100	55.037	ENSGACG00000018233	pdcd11	97	70.000	Gasterosteus_aculeatus
ENSPNAG00000017225	pdcd11	100	46.599	ENSGAGG00000024314	PDCD11	99	46.372	Gopherus_agassizii
ENSPNAG00000017225	pdcd11	99	46.003	ENSGGOG00000011621	PDCD11	95	45.749	Gorilla_gorilla
ENSPNAG00000017225	pdcd11	99	56.946	ENSHBUG00000020226	pdcd11	95	56.889	Haplochromis_burtoni
ENSPNAG00000017225	pdcd11	99	45.363	ENSHGLG00000001462	PDCD11	95	45.048	Heterocephalus_glaber_female
ENSPNAG00000017225	pdcd11	99	44.804	ENSHGLG00100018779	PDCD11	95	44.432	Heterocephalus_glaber_male
ENSPNAG00000017225	pdcd11	100	55.060	ENSHCOG00000016006	pdcd11	95	54.774	Hippocampus_comes
ENSPNAG00000017225	pdcd11	60	65.143	ENSIPUG00000015102	pdcd11	90	66.547	Ictalurus_punctatus
ENSPNAG00000017225	pdcd11	99	45.408	ENSSTOG00000014553	PDCD11	95	45.542	Ictidomys_tridecemlineatus
ENSPNAG00000017225	pdcd11	99	45.302	ENSJJAG00000015523	Pdcd11	95	45.490	Jaculus_jaculus
ENSPNAG00000017225	pdcd11	68	54.067	ENSKMAG00000021182	pdcd11	91	54.067	Kryptolebias_marmoratus
ENSPNAG00000017225	pdcd11	100	54.053	ENSLOCG00000011818	pdcd11	95	53.995	Lepisosteus_oculatus
ENSPNAG00000017225	pdcd11	99	46.071	ENSLAFG00000008398	PDCD11	95	45.598	Loxodonta_africana
ENSPNAG00000017225	pdcd11	99	45.836	ENSMFAG00000044058	PDCD11	95	45.470	Macaca_fascicularis
ENSPNAG00000017225	pdcd11	99	45.780	ENSMMUG00000007058	PDCD11	95	45.414	Macaca_mulatta
ENSPNAG00000017225	pdcd11	99	45.947	ENSMNEG00000040726	PDCD11	95	45.470	Macaca_nemestrina
ENSPNAG00000017225	pdcd11	99	45.911	ENSMLEG00000040978	PDCD11	95	45.671	Mandrillus_leucophaeus
ENSPNAG00000017225	pdcd11	100	57.274	ENSMAMG00000009572	pdcd11	95	57.331	Mastacembelus_armatus
ENSPNAG00000017225	pdcd11	99	56.889	ENSMZEG00005008949	pdcd11	95	56.831	Maylandia_zebra
ENSPNAG00000017225	pdcd11	100	45.388	ENSMGAG00000010482	PDCD11	95	45.363	Meleagris_gallopavo
ENSPNAG00000017225	pdcd11	89	46.803	ENSMAUG00000014924	Pdcd11	91	45.737	Mesocricetus_auratus
ENSPNAG00000017225	pdcd11	99	46.352	ENSMICG00000012421	PDCD11	95	46.150	Microcebus_murinus
ENSPNAG00000017225	pdcd11	99	44.693	ENSMOCG00000021792	Pdcd11	95	44.457	Microtus_ochrogaster
ENSPNAG00000017225	pdcd11	99	50.394	ENSMMOG00000007572	pdcd11	92	57.363	Mola_mola
ENSPNAG00000017225	pdcd11	100	50.438	ENSMODG00000011077	PDCD11	95	42.659	Monodelphis_domestica
ENSPNAG00000017225	pdcd11	100	50.085	ENSMALG00000003859	pdcd11	92	56.475	Monopterus_albus
ENSPNAG00000017225	pdcd11	99	44.768	MGP_CAROLIEiJ_G0023050	Pdcd11	95	44.785	Mus_caroli
ENSPNAG00000017225	pdcd11	99	44.420	ENSMUSG00000025047	Pdcd11	95	44.501	Mus_musculus
ENSPNAG00000017225	pdcd11	99	44.687	MGP_PahariEiJ_G0014540	Pdcd11	95	44.543	Mus_pahari
ENSPNAG00000017225	pdcd11	99	44.302	MGP_SPRETEiJ_G0023971	Pdcd11	95	44.438	Mus_spretus
ENSPNAG00000017225	pdcd11	99	46.034	ENSMPUG00000016829	PDCD11	95	46.227	Mustela_putorius_furo
ENSPNAG00000017225	pdcd11	99	46.269	ENSMLUG00000004997	PDCD11	95	45.845	Myotis_lucifugus
ENSPNAG00000017225	pdcd11	99	45.109	ENSNGAG00000018143	Pdcd11	95	44.885	Nannospalax_galili
ENSPNAG00000017225	pdcd11	85	67.524	ENSNBRG00000021596	pdcd11	94	63.557	Neolamprologus_brichardi
ENSPNAG00000017225	pdcd11	99	44.165	ENSNLEG00000026700	PDCD11	95	43.544	Nomascus_leucogenys
ENSPNAG00000017225	pdcd11	61	68.000	ENSMEUG00000013719	-	51	67.699	Notamacropus_eugenii
ENSPNAG00000017225	pdcd11	99	49.425	ENSOPRG00000010593	PDCD11	92	49.425	Ochotona_princeps
ENSPNAG00000017225	pdcd11	99	45.100	ENSODEG00000008079	PDCD11	95	44.618	Octodon_degus
ENSPNAG00000017225	pdcd11	99	57.118	ENSONIG00000018835	pdcd11	95	57.061	Oreochromis_niloticus
ENSPNAG00000017225	pdcd11	99	44.288	ENSOANG00000001636	-	95	44.032	Ornithorhynchus_anatinus
ENSPNAG00000017225	pdcd11	99	45.866	ENSOCUG00000006312	PDCD11	95	45.698	Oryctolagus_cuniculus
ENSPNAG00000017225	pdcd11	100	57.020	ENSORLG00020003642	pdcd11	95	57.020	Oryzias_latipes_hni
ENSPNAG00000017225	pdcd11	100	57.192	ENSORLG00015001618	pdcd11	95	57.077	Oryzias_latipes_hsok
ENSPNAG00000017225	pdcd11	77	56.631	ENSOMEG00000010904	pdcd11	98	56.130	Oryzias_melastigma
ENSPNAG00000017225	pdcd11	99	45.627	ENSOGAG00000008683	PDCD11	95	45.973	Otolemur_garnettii
ENSPNAG00000017225	pdcd11	99	45.424	ENSOARG00000003719	PDCD11	95	45.053	Ovis_aries
ENSPNAG00000017225	pdcd11	99	45.836	ENSPPAG00000024593	PDCD11	95	45.461	Pan_paniscus
ENSPNAG00000017225	pdcd11	99	46.343	ENSPPRG00000015133	PDCD11	96	46.395	Panthera_pardus
ENSPNAG00000017225	pdcd11	99	46.287	ENSPTIG00000011433	PDCD11	96	46.339	Panthera_tigris_altaica
ENSPNAG00000017225	pdcd11	99	45.836	ENSPTRG00000002911	PDCD11	95	45.526	Pan_troglodytes
ENSPNAG00000017225	pdcd11	99	46.003	ENSPANG00000020959	PDCD11	95	45.582	Papio_anubis
ENSPNAG00000017225	pdcd11	99	54.661	ENSPKIG00000000973	pdcd11	95	54.384	Paramormyrops_kingsleyae
ENSPNAG00000017225	pdcd11	77	43.920	ENSPSIG00000005102	PDCD11	89	44.041	Pelodiscus_sinensis
ENSPNAG00000017225	pdcd11	67	75.163	ENSPMGG00000007289	pdcd11	97	57.384	Periophthalmus_magnuspinnatus
ENSPNAG00000017225	pdcd11	99	44.519	ENSPEMG00000010315	Pdcd11	95	44.488	Peromyscus_maniculatus_bairdii
ENSPNAG00000017225	pdcd11	99	40.400	ENSPMAG00000003098	pdcd11	95	40.677	Petromyzon_marinus
ENSPNAG00000017225	pdcd11	99	45.014	ENSPCIG00000001118	PDCD11	95	44.475	Phascolarctos_cinereus
ENSPNAG00000017225	pdcd11	100	56.734	ENSPFOG00000006012	pdcd11	95	56.447	Poecilia_formosa
ENSPNAG00000017225	pdcd11	100	52.479	ENSPLAG00000014494	pdcd11	96	52.422	Poecilia_latipinna
ENSPNAG00000017225	pdcd11	100	48.696	ENSPMEG00000018177	pdcd11	97	54.908	Poecilia_mexicana
ENSPNAG00000017225	pdcd11	100	55.950	ENSPREG00000000475	pdcd11	95	55.549	Poecilia_reticulata
ENSPNAG00000017225	pdcd11	99	42.170	ENSPPYG00000002621	PDCD11	95	41.690	Pongo_abelii
ENSPNAG00000017225	pdcd11	66	53.191	ENSPCAG00000011663	PDCD11	65	53.191	Procavia_capensis
ENSPNAG00000017225	pdcd11	90	46.887	ENSPCOG00000023327	PDCD11	92	47.200	Propithecus_coquereli
ENSPNAG00000017225	pdcd11	99	45.612	ENSPVAG00000004176	PDCD11	95	45.444	Pteropus_vampyrus
ENSPNAG00000017225	pdcd11	99	56.716	ENSPNYG00000003979	pdcd11	95	56.659	Pundamilia_nyererei
ENSPNAG00000017225	pdcd11	99	44.494	ENSRNOG00000020304	Pdcd11	95	43.905	Rattus_norvegicus
ENSPNAG00000017225	pdcd11	99	45.892	ENSRBIG00000011889	PDCD11	95	45.556	Rhinopithecus_bieti
ENSPNAG00000017225	pdcd11	99	45.892	ENSRROG00000030483	PDCD11	95	45.556	Rhinopithecus_roxellana
ENSPNAG00000017225	pdcd11	90	44.928	YMR229C	-	92	30.463	Saccharomyces_cerevisiae
ENSPNAG00000017225	pdcd11	99	43.009	ENSSBOG00000030308	PDCD11	95	43.145	Saimiri_boliviensis_boliviensis
ENSPNAG00000017225	pdcd11	100	44.444	ENSSHAG00000018258	PDCD11	95	44.320	Sarcophilus_harrisii
ENSPNAG00000017225	pdcd11	100	55.695	ENSSFOG00015003881	pdcd11	95	55.409	Scleropages_formosus
ENSPNAG00000017225	pdcd11	100	57.699	ENSSMAG00000006612	pdcd11	95	57.699	Scophthalmus_maximus
ENSPNAG00000017225	pdcd11	97	54.155	ENSSDUG00000021302	pdcd11	94	57.280	Seriola_dumerili
ENSPNAG00000017225	pdcd11	74	72.000	ENSSARG00000002540	PDCD11	65	72.000	Sorex_araneus
ENSPNAG00000017225	pdcd11	97	56.391	ENSSPAG00000017558	pdcd11	95	56.509	Stegastes_partitus
ENSPNAG00000017225	pdcd11	99	46.017	ENSSSCG00000010599	PDCD11	99	45.759	Sus_scrofa
ENSPNAG00000017225	pdcd11	75	53.104	ENSTRUG00000014291	pdcd11	93	53.104	Takifugu_rubripes
ENSPNAG00000017225	pdcd11	99	55.266	ENSTNIG00000012085	pdcd11	95	54.870	Tetraodon_nigroviridis
ENSPNAG00000017225	pdcd11	99	43.493	ENSTBEG00000001893	PDCD11	91	63.529	Tupaia_belangeri
ENSPNAG00000017225	pdcd11	97	44.425	ENSTTRG00000003356	PDCD11	92	44.201	Tursiops_truncatus
ENSPNAG00000017225	pdcd11	99	46.132	ENSUAMG00000018015	PDCD11	95	46.321	Ursus_americanus
ENSPNAG00000017225	pdcd11	99	45.531	ENSUMAG00000023567	PDCD11	95	45.571	Ursus_maritimus
ENSPNAG00000017225	pdcd11	67	55.056	ENSVPAG00000007405	PDCD11	68	55.056	Vicugna_pacos
ENSPNAG00000017225	pdcd11	99	46.737	ENSVVUG00000004457	PDCD11	95	46.429	Vulpes_vulpes
ENSPNAG00000017225	pdcd11	100	45.727	ENSXETG00000009482	pdcd11	95	45.863	Xenopus_tropicalis
ENSPNAG00000017225	pdcd11	97	49.405	ENSXCOG00000012420	pdcd11	95	47.959	Xiphophorus_couchianus
ENSPNAG00000017225	pdcd11	100	56.504	ENSXMAG00000004638	pdcd11	95	56.275	Xiphophorus_maculatus