EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017286 (Gene tree)
Gene ID: -
Gene Symbol: znf516
Alias: si:ch211-135j15.1
Full Name: zinc finger protein 516
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 23061 bases
Position: chrKV575354.1:3033551-3056611
Accession: 108429097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030517	zf-C2H2	PF00096.26	2.8e-36	1	5
ENSPNAP00000030517	zf-C2H2	PF00096.26	2.8e-36	2	5
ENSPNAP00000030517	zf-C2H2	PF00096.26	2.8e-36	3	5
ENSPNAP00000030517	zf-C2H2	PF00096.26	2.8e-36	4	5
ENSPNAP00000030517	zf-C2H2	PF00096.26	2.8e-36	5	5
ENSPNAP00000030517	zf-met	PF12874.7	1.2e-09	1	2
ENSPNAP00000030517	zf-met	PF12874.7	1.2e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000036193	-	3231	XM_017700605	ENSPNAP00000030517	1076 (aa)	XP_017556094	-

Gene Model

Click here to download ENSPNAG00000017286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017286's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017286	znf516	53	31.933	ENSPNAG00000002209	-	92	31.933
ENSPNAG00000017286	znf516	58	49.057	ENSPNAG00000003702	-	75	49.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017286	znf516	99	78.687	ENSAMXG00000011137	znf516	99	79.676	Astyanax_mexicanus
ENSPNAG00000017286	znf516	99	65.696	ENSDARG00000070809	znf516	99	65.820	Danio_rerio
ENSPNAG00000017286	znf516	100	75.000	ENSIPUG00000003046	znf516	100	75.000	Ictalurus_punctatus