EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000017309 (Gene tree)
Gene ID: 108425046
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 3093 bases
Position: chrKV575314.1:3722091-3725183
Accession: 108425046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030534	Mitoc_L55	PF09776.9	2.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018712	-	711	XM_017693423	ENSPNAP00000030534	132 (aa)	XP_017548912	UPI0008142D81

Gene Model

Click here to download ENSPNAG00000017309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017309	zgc:171480	80	62.264	ENSAPOG00000002881	zgc:171480	73	62.264	Acanthochromis_polyacanthus
ENSPNAG00000017309	zgc:171480	80	60.377	ENSACIG00000001646	zgc:171480	77	60.377	Amphilophus_citrinellus
ENSPNAG00000017309	zgc:171480	80	64.151	ENSAOCG00000016155	zgc:171480	73	64.151	Amphiprion_ocellaris
ENSPNAG00000017309	zgc:171480	80	64.151	ENSAPEG00000022327	zgc:171480	73	64.151	Amphiprion_percula
ENSPNAG00000017309	zgc:171480	80	63.208	ENSATEG00000005625	zgc:171480	71	63.208	Anabas_testudineus
ENSPNAG00000017309	zgc:171480	92	56.198	ENSACAG00000006897	-	95	56.198	Anolis_carolinensis
ENSPNAG00000017309	zgc:171480	76	64.000	ENSACLG00000005172	zgc:171480	72	64.000	Astatotilapia_calliptera
ENSPNAG00000017309	zgc:171480	100	75.000	ENSAMXG00000043839	zgc:171480	100	78.030	Astyanax_mexicanus
ENSPNAG00000017309	zgc:171480	92	57.025	ENSCPBG00000001771	-	96	57.025	Chrysemys_picta_bellii
ENSPNAG00000017309	zgc:171480	91	57.377	ENSCSEG00000019533	zgc:171480	86	59.016	Cynoglossus_semilaevis
ENSPNAG00000017309	zgc:171480	99	67.939	ENSDARG00000043402	zgc:171480	98	67.939	Danio_rerio
ENSPNAG00000017309	zgc:171480	99	64.122	ENSELUG00000007716	zgc:171480	100	64.122	Esox_lucius
ENSPNAG00000017309	zgc:171480	71	55.319	ENSFALG00000001083	-	96	55.319	Ficedula_albicollis
ENSPNAG00000017309	zgc:171480	82	58.716	ENSFHEG00000000203	zgc:171480	76	59.813	Fundulus_heteroclitus
ENSPNAG00000017309	zgc:171480	76	66.000	ENSGMOG00000019009	zgc:171480	97	66.000	Gadus_morhua
ENSPNAG00000017309	zgc:171480	92	49.587	ENSGALG00000038820	-	99	49.587	Gallus_gallus
ENSPNAG00000017309	zgc:171480	92	54.032	ENSGAFG00000004832	-	85	54.032	Gambusia_affinis
ENSPNAG00000017309	zgc:171480	70	70.652	ENSGACG00000002136	zgc:171480	99	71.739	Gasterosteus_aculeatus
ENSPNAG00000017309	zgc:171480	87	57.759	ENSGAGG00000001806	-	92	57.759	Gopherus_agassizii
ENSPNAG00000017309	zgc:171480	76	64.000	ENSHBUG00000007895	zgc:171480	72	64.000	Haplochromis_burtoni
ENSPNAG00000017309	zgc:171480	80	64.762	ENSHCOG00000003526	zgc:171480	57	64.762	Hippocampus_comes
ENSPNAG00000017309	zgc:171480	100	75.758	ENSIPUG00000001273	mrpl55	100	75.758	Ictalurus_punctatus
ENSPNAG00000017309	zgc:171480	78	58.252	ENSKMAG00000002011	zgc:171480	80	58.252	Kryptolebias_marmoratus
ENSPNAG00000017309	zgc:171480	80	60.377	ENSLBEG00000010915	zgc:171480	83	60.377	Labrus_bergylta
ENSPNAG00000017309	zgc:171480	80	60.377	ENSLBEG00000016107	-	83	60.377	Labrus_bergylta
ENSPNAG00000017309	zgc:171480	90	65.546	ENSLACG00000016281	zgc:171480	90	65.546	Latimeria_chalumnae
ENSPNAG00000017309	zgc:171480	80	62.264	ENSMAMG00000022250	zgc:171480	71	62.264	Mastacembelus_armatus
ENSPNAG00000017309	zgc:171480	76	64.000	ENSMZEG00005015585	zgc:171480	72	64.000	Maylandia_zebra
ENSPNAG00000017309	zgc:171480	92	48.760	ENSMGAG00000002612	-	99	48.760	Meleagris_gallopavo
ENSPNAG00000017309	zgc:171480	87	44.348	ENSMMOG00000008740	-	87	44.348	Mola_mola
ENSPNAG00000017309	zgc:171480	89	54.701	ENSMALG00000019823	zgc:171480	83	58.491	Monopterus_albus
ENSPNAG00000017309	zgc:171480	76	64.000	ENSNBRG00000019447	zgc:171480	72	64.000	Neolamprologus_brichardi
ENSPNAG00000017309	zgc:171480	76	62.000	ENSONIG00000007645	zgc:171480	73	62.000	Oreochromis_niloticus
ENSPNAG00000017309	zgc:171480	80	56.481	ENSORLG00020006963	zgc:171480	78	56.481	Oryzias_latipes_hni
ENSPNAG00000017309	zgc:171480	76	58.252	ENSORLG00015003266	zgc:171480	74	58.252	Oryzias_latipes_hsok
ENSPNAG00000017309	zgc:171480	80	58.716	ENSOMEG00000008184	zgc:171480	76	58.716	Oryzias_melastigma
ENSPNAG00000017309	zgc:171480	99	57.252	ENSPKIG00000006753	zgc:171480	100	57.252	Paramormyrops_kingsleyae
ENSPNAG00000017309	zgc:171480	92	55.372	ENSPSIG00000010893	-	96	55.372	Pelodiscus_sinensis
ENSPNAG00000017309	zgc:171480	89	54.237	ENSPMGG00000012657	-	87	54.237	Periophthalmus_magnuspinnatus
ENSPNAG00000017309	zgc:171480	70	53.763	ENSPMAG00000000867	zgc:171480	93	47.706	Petromyzon_marinus
ENSPNAG00000017309	zgc:171480	83	56.522	ENSPCIG00000021848	-	91	56.522	Phascolarctos_cinereus
ENSPNAG00000017309	zgc:171480	96	54.135	ENSPFOG00000012703	zgc:171480	94	54.135	Poecilia_formosa
ENSPNAG00000017309	zgc:171480	90	57.025	ENSPREG00000020328	zgc:171480	86	57.025	Poecilia_reticulata
ENSPNAG00000017309	zgc:171480	99	60.305	ENSSFOG00015015668	mrpl55	100	60.305	Scleropages_formosus
ENSPNAG00000017309	zgc:171480	78	61.165	ENSSMAG00000005429	zgc:171480	73	61.165	Scophthalmus_maximus
ENSPNAG00000017309	zgc:171480	99	52.857	ENSSDUG00000022556	zgc:171480	94	52.857	Seriola_dumerili
ENSPNAG00000017309	zgc:171480	99	52.143	ENSSLDG00000019598	zgc:171480	94	52.143	Seriola_lalandi_dorsalis
ENSPNAG00000017309	zgc:171480	84	57.143	ENSSPUG00000000735	-	88	57.143	Sphenodon_punctatus
ENSPNAG00000017309	zgc:171480	80	63.208	ENSSPAG00000011598	zgc:171480	74	63.208	Stegastes_partitus
ENSPNAG00000017309	zgc:171480	87	58.261	ENSTRUG00000003082	zgc:171480	80	58.261	Takifugu_rubripes
ENSPNAG00000017309	zgc:171480	70	63.043	ENSXCOG00000005887	zgc:171480	75	63.043	Xiphophorus_couchianus
ENSPNAG00000017309	zgc:171480	90	54.545	ENSXMAG00000007937	zgc:171480	86	54.545	Xiphophorus_maculatus