EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017466 (Gene tree)
Gene ID: 108423822
Gene Symbol: rab38b
Alias: si:dkey-76a19.3
Full Name: ras-related protein Rab-38-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12639 bases
Position: chrKV575304.1:4319838-4332476
Accession: 108423822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030632	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000036259	-	1892	XM_017691413	ENSPNAP00000030632	210 (aa)	XP_017546902	UPI000814AD4A

Gene Model

Click here to download ENSPNAG00000017466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017466	rab38b	94	33.824	ENSPNAG00000028379	rab6ba	94	33.824
ENSPNAG00000017466	rab38b	92	30.500	ENSPNAG00000000694	rab25a	92	30.457
ENSPNAG00000017466	rab38b	95	32.161	ENSPNAG00000007277	RAB9A	93	32.161
ENSPNAG00000017466	rab38b	77	37.037	ENSPNAG00000017856	zgc:101559	68	37.037
ENSPNAG00000017466	rab38b	80	33.529	ENSPNAG00000013747	mras	78	33.529
ENSPNAG00000017466	rab38b	74	35.404	ENSPNAG00000024728	rab23	78	36.416
ENSPNAG00000017466	rab38b	58	41.463	ENSPNAG00000014146	-	56	41.463
ENSPNAG00000017466	rab38b	90	31.122	ENSPNAG00000006569	rab25b	89	31.122
ENSPNAG00000017466	rab38b	77	37.423	ENSPNAG00000013863	rab1ab	71	37.423
ENSPNAG00000017466	rab38b	76	40.994	ENSPNAG00000018986	si:dkey-16l2.16	73	40.994
ENSPNAG00000017466	rab38b	90	36.316	ENSPNAG00000016600	-	90	36.316
ENSPNAG00000017466	rab38b	80	33.136	ENSPNAG00000020475	rab11ba	74	33.136
ENSPNAG00000017466	rab38b	95	34.146	ENSPNAG00000011215	rab15	93	34.146
ENSPNAG00000017466	rab38b	93	31.579	ENSPNAG00000014863	rab11a	93	31.579
ENSPNAG00000017466	rab38b	75	30.675	ENSPNAG00000009496	rab5ab	69	30.675
ENSPNAG00000017466	rab38b	90	36.979	ENSPNAG00000029115	rab33ba	75	37.356
ENSPNAG00000017466	rab38b	85	35.556	ENSPNAG00000003227	rab3c	91	34.466
ENSPNAG00000017466	rab38b	80	38.012	ENSPNAG00000004189	rab13	86	38.012
ENSPNAG00000017466	rab38b	93	31.579	ENSPNAG00000013589	rab39bb	95	31.579
ENSPNAG00000017466	rab38b	75	34.591	ENSPNAG00000010760	rab30	75	34.591
ENSPNAG00000017466	rab38b	55	35.345	ENSPNAG00000015040	rab34b	52	37.795
ENSPNAG00000017466	rab38b	89	34.225	ENSPNAG00000018132	rab9b	83	34.225
ENSPNAG00000017466	rab38b	81	30.114	ENSPNAG00000028138	rab5c	75	30.114
ENSPNAG00000017466	rab38b	79	36.842	ENSPNAG00000013004	rab1ba	80	36.842
ENSPNAG00000017466	rab38b	81	30.682	ENSPNAG00000002218	-	77	30.409
ENSPNAG00000017466	rab38b	93	34.184	ENSPNAG00000015031	rab12	81	32.195
ENSPNAG00000017466	rab38b	88	36.559	ENSPNAG00000015810	RAB15	87	36.559
ENSPNAG00000017466	rab38b	93	30.952	ENSPNAG00000029085	rab11al	94	30.952
ENSPNAG00000017466	rab38b	72	31.169	ENSPNAG00000004728	rheb	79	31.169
ENSPNAG00000017466	rab38b	79	38.596	ENSPNAG00000029574	zgc:171927	76	38.596
ENSPNAG00000017466	rab38b	79	36.527	ENSPNAG00000012540	-	79	36.527
ENSPNAG00000017466	rab38b	76	35.802	ENSPNAG00000011193	rab2a	73	35.802
ENSPNAG00000017466	rab38b	78	30.909	ENSPNAG00000018361	rras	82	30.909
ENSPNAG00000017466	rab38b	94	35.176	ENSPNAG00000011548	rab18a	95	35.176
ENSPNAG00000017466	rab38b	95	34.673	ENSPNAG00000017938	RAB9A	90	34.673
ENSPNAG00000017466	rab38b	83	37.500	ENSPNAG00000014046	-	83	37.500
ENSPNAG00000017466	rab38b	90	35.979	ENSPNAG00000020583	zgc:100918	91	35.979
ENSPNAG00000017466	rab38b	76	34.568	ENSPNAG00000006431	-	71	34.568
ENSPNAG00000017466	rab38b	95	33.333	ENSPNAG00000005519	-	94	33.333
ENSPNAG00000017466	rab38b	76	35.802	ENSPNAG00000014363	-	72	35.802
ENSPNAG00000017466	rab38b	80	35.119	ENSPNAG00000016567	rab42a	77	35.119
ENSPNAG00000017466	rab38b	94	34.146	ENSPNAG00000021737	rab41	93	34.146
ENSPNAG00000017466	rab38b	94	33.333	ENSPNAG00000010157	rab6bb	94	33.333
ENSPNAG00000017466	rab38b	80	36.471	ENSPNAG00000002404	rab18b	80	36.471
ENSPNAG00000017466	rab38b	69	30.405	ENSPNAG00000024137	ARL6	74	30.405
ENSPNAG00000017466	rab38b	76	34.568	ENSPNAG00000015161	rab22a	79	34.568
ENSPNAG00000017466	rab38b	90	36.316	ENSPNAG00000015164	-	90	36.316
ENSPNAG00000017466	rab38b	80	32.941	ENSPNAG00000013897	rab39ba	77	32.941
ENSPNAG00000017466	rab38b	80	32.941	ENSPNAG00000026295	si:ch73-116o1.2	78	32.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017466	rab38b	98	74.757	ENSAMXG00000036330	RAB38	95	74.757	Astyanax_mexicanus
ENSPNAG00000017466	rab38b	54	90.265	ENSFHEG00000018056	rab38b	93	90.265	Fundulus_heteroclitus
ENSPNAG00000017466	rab38b	99	81.818	ENSMMOG00000006440	rab38b	96	82.843	Mola_mola
ENSPNAG00000017466	rab38b	99	79.426	ENSMALG00000013514	rab38b	95	79.426	Monopterus_albus