EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017473 (Gene tree)
Gene ID: 108431811
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 57904 bases
Position: chrKV575394.1:329844-387747
Accession: 108431811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030597	R3H	PF01424.22	8.1e-11	1	1
ENSPNAP00000030636	R3H	PF01424.22	8.5e-11	1	1
ENSPNAP00000011774	R3H	PF01424.22	8.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018813	-	4491	XM_017705194	ENSPNAP00000030597	1030 (aa)	XP_017560683	-
ENSPNAT00000036254	-	4539	XM_017705192	ENSPNAP00000011774	1046 (aa)	XP_017560681	UPI0008148264
ENSPNAT00000018873	-	4593	XM_017705185	ENSPNAP00000030636	1064 (aa)	XP_017560674	UPI00081468ED

Gene Model

Click here to download ENSPNAG00000017473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017473	r3hdm2	89	58.871	ENSPNAG00000013952	r3hdm1	96	46.929
ENSPNAG00000017473	r3hdm2	52	38.861	ENSPNAG00000004162	arpp21	73	40.183
ENSPNAG00000017473	r3hdm2	81	65.449	ENSPNAG00000005436	R3HDM1	99	47.132

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017473	r3hdm2	99	62.963	ENSG00000179912	R3HDM2	98	69.180	Homo_sapiens
ENSPNAG00000017473	r3hdm2	63	36.466	ENSAPOG00000021873	-	55	46.467	Acanthochromis_polyacanthus
ENSPNAG00000017473	r3hdm2	100	77.958	ENSAPOG00000020341	r3hdm2	100	75.769	Acanthochromis_polyacanthus
ENSPNAG00000017473	r3hdm2	95	66.123	ENSAMEG00000004812	R3HDM2	99	64.345	Ailuropoda_melanoleuca
ENSPNAG00000017473	r3hdm2	93	75.838	ENSACIG00000016146	r3hdm2	98	73.807	Amphilophus_citrinellus
ENSPNAG00000017473	r3hdm2	100	77.868	ENSAOCG00000023694	r3hdm2	100	75.678	Amphiprion_ocellaris
ENSPNAG00000017473	r3hdm2	100	77.921	ENSAPEG00000008851	r3hdm2	99	77.983	Amphiprion_percula
ENSPNAG00000017473	r3hdm2	100	75.023	ENSATEG00000025024	r3hdm2	100	77.800	Anabas_testudineus
ENSPNAG00000017473	r3hdm2	93	73.383	ENSAPLG00000004298	R3HDM2	87	74.010	Anas_platyrhynchos
ENSPNAG00000017473	r3hdm2	99	60.148	ENSACAG00000006388	R3HDM2	99	59.682	Anolis_carolinensis
ENSPNAG00000017473	r3hdm2	99	62.868	ENSANAG00000025397	-	99	61.796	Aotus_nancymaae
ENSPNAG00000017473	r3hdm2	96	61.645	ENSANAG00000031310	-	97	60.458	Aotus_nancymaae
ENSPNAG00000017473	r3hdm2	100	77.507	ENSACLG00000019106	r3hdm2	100	75.678	Astatotilapia_calliptera
ENSPNAG00000017473	r3hdm2	94	84.474	ENSAMXG00000017180	r3hdm2	100	84.474	Astyanax_mexicanus
ENSPNAG00000017473	r3hdm2	96	65.079	ENSBTAG00000018361	R3HDM2	99	62.931	Bos_taurus
ENSPNAG00000017473	r3hdm2	99	62.773	ENSCJAG00000007365	R3HDM2	98	66.055	Callithrix_jacchus
ENSPNAG00000017473	r3hdm2	95	64.782	ENSCAFG00000000215	R3HDM2	99	63.567	Canis_familiaris
ENSPNAG00000017473	r3hdm2	95	66.377	ENSCAFG00020023713	R3HDM2	99	65.331	Canis_lupus_dingo
ENSPNAG00000017473	r3hdm2	95	66.506	ENSCHIG00000014022	R3HDM2	99	64.842	Capra_hircus
ENSPNAG00000017473	r3hdm2	99	63.143	ENSTSYG00000001449	R3HDM2	99	62.739	Carlito_syrichta
ENSPNAG00000017473	r3hdm2	99	64.668	ENSCPOG00000009217	R3HDM2	99	64.007	Cavia_porcellus
ENSPNAG00000017473	r3hdm2	88	62.607	ENSCCAG00000026083	R3HDM2	99	61.332	Cebus_capucinus
ENSPNAG00000017473	r3hdm2	99	63.661	ENSCATG00000036929	R3HDM2	99	63.182	Cercocebus_atys
ENSPNAG00000017473	r3hdm2	99	65.129	ENSCLAG00000011997	R3HDM2	99	64.537	Chinchilla_lanigera
ENSPNAG00000017473	r3hdm2	99	64.640	ENSCSAG00000004911	R3HDM2	99	63.688	Chlorocebus_sabaeus
ENSPNAG00000017473	r3hdm2	75	64.147	ENSCHOG00000005636	R3HDM2	89	65.116	Choloepus_hoffmanni
ENSPNAG00000017473	r3hdm2	95	64.939	ENSCPBG00000013922	R3HDM2	99	62.103	Chrysemys_picta_bellii
ENSPNAG00000017473	r3hdm2	99	63.661	ENSCANG00000043807	R3HDM2	99	63.090	Colobus_angolensis_palliatus
ENSPNAG00000017473	r3hdm2	99	64.543	ENSCGRG00001017324	R3hdm2	99	63.670	Cricetulus_griseus_chok1gshd
ENSPNAG00000017473	r3hdm2	99	64.543	ENSCGRG00000003862	R3hdm2	99	63.670	Cricetulus_griseus_crigri
ENSPNAG00000017473	r3hdm2	100	75.815	ENSCSEG00000010925	r3hdm2	100	73.850	Cynoglossus_semilaevis
ENSPNAG00000017473	r3hdm2	100	76.763	ENSCVAG00000009058	r3hdm2	100	75.316	Cyprinodon_variegatus
ENSPNAG00000017473	r3hdm2	86	93.143	ENSDARG00000102610	r3hdm2	99	80.589	Danio_rerio
ENSPNAG00000017473	r3hdm2	96	66.113	ENSDNOG00000015033	R3HDM2	100	64.905	Dasypus_novemcinctus
ENSPNAG00000017473	r3hdm2	95	63.100	ENSDORG00000011462	R3hdm2	99	62.438	Dipodomys_ordii
ENSPNAG00000017473	r3hdm2	96	66.891	ENSEASG00005007091	R3HDM2	99	65.088	Equus_asinus_asinus
ENSPNAG00000017473	r3hdm2	99	64.787	ENSECAG00000003157	R3HDM2	99	65.088	Equus_caballus
ENSPNAG00000017473	r3hdm2	100	74.025	ENSELUG00000015969	r3hdm2	100	72.848	Esox_lucius
ENSPNAG00000017473	r3hdm2	60	37.612	ENSELUG00000002532	-	72	42.784	Esox_lucius
ENSPNAG00000017473	r3hdm2	95	66.538	ENSFCAG00000000192	R3HDM2	98	64.639	Felis_catus
ENSPNAG00000017473	r3hdm2	82	61.755	ENSFALG00000000255	R3HDM2	98	58.715	Ficedula_albicollis
ENSPNAG00000017473	r3hdm2	99	64.041	ENSFDAG00000019385	R3HDM2	99	63.915	Fukomys_damarensis
ENSPNAG00000017473	r3hdm2	100	76.742	ENSFHEG00000016484	r3hdm2	100	75.294	Fundulus_heteroclitus
ENSPNAG00000017473	r3hdm2	95	74.209	ENSGMOG00000007961	r3hdm2	94	80.583	Gadus_morhua
ENSPNAG00000017473	r3hdm2	99	65.468	ENSGALG00000043736	R3HDM2	99	62.177	Gallus_gallus
ENSPNAG00000017473	r3hdm2	50	38.710	ENSGAFG00000015558	-	58	43.702	Gambusia_affinis
ENSPNAG00000017473	r3hdm2	100	77.355	ENSGAFG00000013887	r3hdm2	100	75.543	Gambusia_affinis
ENSPNAG00000017473	r3hdm2	95	79.267	ENSGACG00000006442	r3hdm2	100	78.227	Gasterosteus_aculeatus
ENSPNAG00000017473	r3hdm2	95	64.656	ENSGAGG00000017797	R3HDM2	99	61.740	Gopherus_agassizii
ENSPNAG00000017473	r3hdm2	99	63.845	ENSGGOG00000015007	R3HDM2	99	63.367	Gorilla_gorilla
ENSPNAG00000017473	r3hdm2	99	64.411	ENSHGLG00000010434	-	99	63.915	Heterocephalus_glaber_female
ENSPNAG00000017473	r3hdm2	89	58.369	ENSHGLG00000010421	-	93	62.848	Heterocephalus_glaber_female
ENSPNAG00000017473	r3hdm2	93	57.302	ENSHGLG00100018871	-	92	66.848	Heterocephalus_glaber_male
ENSPNAG00000017473	r3hdm2	99	64.319	ENSHGLG00100004183	-	99	63.822	Heterocephalus_glaber_male
ENSPNAG00000017473	r3hdm2	100	75.940	ENSHCOG00000001142	r3hdm2	97	74.624	Hippocampus_comes
ENSPNAG00000017473	r3hdm2	100	90.038	ENSIPUG00000023873	r3hdm2	100	89.753	Ictalurus_punctatus
ENSPNAG00000017473	r3hdm2	99	60.574	ENSSTOG00000013424	R3HDM2	99	59.866	Ictidomys_tridecemlineatus
ENSPNAG00000017473	r3hdm2	99	64.469	ENSJJAG00000010001	R3hdm2	99	63.704	Jaculus_jaculus
ENSPNAG00000017473	r3hdm2	100	76.805	ENSKMAG00000012695	r3hdm2	99	75.428	Kryptolebias_marmoratus
ENSPNAG00000017473	r3hdm2	54	39.153	ENSLBEG00000002779	-	55	49.288	Labrus_bergylta
ENSPNAG00000017473	r3hdm2	100	76.812	ENSLBEG00000013115	r3hdm2	96	74.728	Labrus_bergylta
ENSPNAG00000017473	r3hdm2	95	65.373	ENSLACG00000019064	r3hdm2	100	63.911	Latimeria_chalumnae
ENSPNAG00000017473	r3hdm2	99	71.156	ENSLOCG00000005976	r3hdm2	99	71.156	Lepisosteus_oculatus
ENSPNAG00000017473	r3hdm2	99	65.709	ENSLAFG00000006510	R3HDM2	99	64.253	Loxodonta_africana
ENSPNAG00000017473	r3hdm2	99	63.753	ENSMFAG00000036385	R3HDM2	99	63.275	Macaca_fascicularis
ENSPNAG00000017473	r3hdm2	99	64.489	ENSMMUG00000021789	R3HDM2	99	64.015	Macaca_mulatta
ENSPNAG00000017473	r3hdm2	99	64.213	ENSMNEG00000025314	R3HDM2	99	63.275	Macaca_nemestrina
ENSPNAG00000017473	r3hdm2	99	63.753	ENSMLEG00000028915	R3HDM2	99	63.275	Mandrillus_leucophaeus
ENSPNAG00000017473	r3hdm2	100	77.006	ENSMAMG00000009793	r3hdm2	100	75.293	Mastacembelus_armatus
ENSPNAG00000017473	r3hdm2	100	77.507	ENSMZEG00005007319	r3hdm2	100	75.678	Maylandia_zebra
ENSPNAG00000017473	r3hdm2	99	62.200	ENSMICG00000012389	R3HDM2	99	62.165	Microcebus_murinus
ENSPNAG00000017473	r3hdm2	99	64.782	ENSMOCG00000014425	R3hdm2	99	64.041	Microtus_ochrogaster
ENSPNAG00000017473	r3hdm2	95	75.374	ENSMMOG00000007448	r3hdm2	99	74.122	Mola_mola
ENSPNAG00000017473	r3hdm2	93	74.603	ENSMALG00000010211	r3hdm2	99	79.088	Monopterus_albus
ENSPNAG00000017473	r3hdm2	95	66.602	MGP_CAROLIEiJ_G0015896	R3hdm2	99	63.207	Mus_caroli
ENSPNAG00000017473	r3hdm2	99	65.374	ENSMUSG00000025404	R3hdm2	99	63.948	Mus_musculus
ENSPNAG00000017473	r3hdm2	99	62.873	MGP_PahariEiJ_G0031189	R3hdm2	99	64.133	Mus_pahari
ENSPNAG00000017473	r3hdm2	99	65.374	MGP_SPRETEiJ_G0016722	R3hdm2	99	63.771	Mus_spretus
ENSPNAG00000017473	r3hdm2	93	66.236	ENSMPUG00000001818	R3HDM2	96	63.713	Mustela_putorius_furo
ENSPNAG00000017473	r3hdm2	99	64.738	ENSMLUG00000004980	R3HDM2	99	64.253	Myotis_lucifugus
ENSPNAG00000017473	r3hdm2	99	64.673	ENSNGAG00000018800	R3hdm2	99	64.100	Nannospalax_galili
ENSPNAG00000017473	r3hdm2	94	75.984	ENSNBRG00000004483	r3hdm2	99	73.764	Neolamprologus_brichardi
ENSPNAG00000017473	r3hdm2	99	63.937	ENSNLEG00000017351	R3HDM2	99	63.367	Nomascus_leucogenys
ENSPNAG00000017473	r3hdm2	99	56.534	ENSMEUG00000008588	R3HDM2	99	55.483	Notamacropus_eugenii
ENSPNAG00000017473	r3hdm2	99	59.751	ENSOPRG00000013670	R3HDM2	95	66.511	Ochotona_princeps
ENSPNAG00000017473	r3hdm2	100	75.806	ENSONIG00000005075	r3hdm2	100	74.763	Oreochromis_niloticus
ENSPNAG00000017473	r3hdm2	99	65.374	ENSOCUG00000013258	R3HDM2	99	64.750	Oryctolagus_cuniculus
ENSPNAG00000017473	r3hdm2	100	75.634	ENSORLG00000005502	r3hdm2	100	74.275	Oryzias_latipes
ENSPNAG00000017473	r3hdm2	100	75.815	ENSORLG00020017069	r3hdm2	100	74.366	Oryzias_latipes_hni
ENSPNAG00000017473	r3hdm2	100	75.815	ENSORLG00015012735	r3hdm2	100	74.457	Oryzias_latipes_hsok
ENSPNAG00000017473	r3hdm2	100	70.000	ENSOMEG00000018079	r3hdm2	99	68.396	Oryzias_melastigma
ENSPNAG00000017473	r3hdm2	96	56.987	ENSOGAG00000027966	-	98	54.726	Otolemur_garnettii
ENSPNAG00000017473	r3hdm2	99	62.373	ENSOGAG00000012055	R3HDM2	99	61.503	Otolemur_garnettii
ENSPNAG00000017473	r3hdm2	96	64.985	ENSOARG00000006929	R3HDM2	99	62.739	Ovis_aries
ENSPNAG00000017473	r3hdm2	99	63.937	ENSPPAG00000034395	R3HDM2	99	63.460	Pan_paniscus
ENSPNAG00000017473	r3hdm2	95	64.776	ENSPPRG00000009240	R3HDM2	99	62.704	Panthera_pardus
ENSPNAG00000017473	r3hdm2	95	64.776	ENSPTIG00000008752	R3HDM2	99	62.704	Panthera_tigris_altaica
ENSPNAG00000017473	r3hdm2	99	63.937	ENSPTRG00000046457	R3HDM2	99	63.460	Pan_troglodytes
ENSPNAG00000017473	r3hdm2	95	64.420	ENSPANG00000024002	R3HDM2	96	65.633	Papio_anubis
ENSPNAG00000017473	r3hdm2	96	80.000	ENSPKIG00000003171	r3hdm2	100	75.820	Paramormyrops_kingsleyae
ENSPNAG00000017473	r3hdm2	65	56.361	ENSPSIG00000006954	R3HDM2	78	74.224	Pelodiscus_sinensis
ENSPNAG00000017473	r3hdm2	93	76.986	ENSPMGG00000007061	r3hdm2	99	75.307	Periophthalmus_magnuspinnatus
ENSPNAG00000017473	r3hdm2	99	65.065	ENSPEMG00000015964	R3hdm2	99	63.729	Peromyscus_maniculatus_bairdii
ENSPNAG00000017473	r3hdm2	99	61.668	ENSPCIG00000023841	R3HDM2	100	59.259	Phascolarctos_cinereus
ENSPNAG00000017473	r3hdm2	58	36.753	ENSPFOG00000008096	-	58	43.299	Poecilia_formosa
ENSPNAG00000017473	r3hdm2	94	91.413	ENSPFOG00000006077	r3hdm2	93	91.413	Poecilia_formosa
ENSPNAG00000017473	r3hdm2	100	76.930	ENSPLAG00000002971	r3hdm2	100	75.184	Poecilia_latipinna
ENSPNAG00000017473	r3hdm2	58	36.433	ENSPLAG00000006973	-	58	43.041	Poecilia_latipinna
ENSPNAG00000017473	r3hdm2	100	76.930	ENSPMEG00000005330	r3hdm2	100	75.184	Poecilia_mexicana
ENSPNAG00000017473	r3hdm2	58	36.738	ENSPMEG00000014457	-	58	42.784	Poecilia_mexicana
ENSPNAG00000017473	r3hdm2	100	77.034	ENSPREG00000008424	r3hdm2	100	75.316	Poecilia_reticulata
ENSPNAG00000017473	r3hdm2	97	59.082	ENSPPYG00000004685	R3HDM2	80	58.904	Pongo_abelii
ENSPNAG00000017473	r3hdm2	82	83.453	ENSPCAG00000014642	R3HDM2	87	84.532	Procavia_capensis
ENSPNAG00000017473	r3hdm2	99	61.738	ENSPCOG00000013201	R3HDM2	99	62.356	Propithecus_coquereli
ENSPNAG00000017473	r3hdm2	99	64.810	ENSPVAG00000003967	R3HDM2	99	64.345	Pteropus_vampyrus
ENSPNAG00000017473	r3hdm2	94	75.228	ENSPNYG00000013479	r3hdm2	100	72.390	Pundamilia_nyererei
ENSPNAG00000017473	r3hdm2	99	64.174	ENSRNOG00000007801	R3hdm2	99	63.670	Rattus_norvegicus
ENSPNAG00000017473	r3hdm2	99	61.064	ENSRBIG00000037403	R3HDM2	99	59.885	Rhinopithecus_bieti
ENSPNAG00000017473	r3hdm2	99	64.673	ENSRROG00000022271	R3HDM2	99	63.367	Rhinopithecus_roxellana
ENSPNAG00000017473	r3hdm2	99	62.773	ENSSBOG00000023547	R3HDM2	99	61.700	Saimiri_boliviensis_boliviensis
ENSPNAG00000017473	r3hdm2	99	62.271	ENSSHAG00000003511	R3HDM2	99	61.305	Sarcophilus_harrisii
ENSPNAG00000017473	r3hdm2	94	74.827	ENSSFOG00015011219	r3hdm2	100	76.775	Scleropages_formosus
ENSPNAG00000017473	r3hdm2	100	76.804	ENSSMAG00000012073	r3hdm2	100	75.068	Scophthalmus_maximus
ENSPNAG00000017473	r3hdm2	100	77.675	ENSSDUG00000019269	r3hdm2	100	75.716	Seriola_dumerili
ENSPNAG00000017473	r3hdm2	58	36.493	ENSSDUG00000009188	-	73	38.623	Seriola_dumerili
ENSPNAG00000017473	r3hdm2	100	77.677	ENSSLDG00000005252	r3hdm2	100	75.749	Seriola_lalandi_dorsalis
ENSPNAG00000017473	r3hdm2	88	60.816	ENSSARG00000003958	R3HDM2	94	58.156	Sorex_araneus
ENSPNAG00000017473	r3hdm2	95	61.561	ENSSPUG00000014132	R3HDM2	99	58.627	Sphenodon_punctatus
ENSPNAG00000017473	r3hdm2	100	77.665	ENSSPAG00000022594	r3hdm2	100	75.368	Stegastes_partitus
ENSPNAG00000017473	r3hdm2	96	64.782	ENSSSCG00000026498	R3HDM2	100	63.965	Sus_scrofa
ENSPNAG00000017473	r3hdm2	74	62.295	ENSTGUG00000015881	R3HDM2	99	61.441	Taeniopygia_guttata
ENSPNAG00000017473	r3hdm2	95	73.459	ENSTRUG00000015075	r3hdm2	99	70.875	Takifugu_rubripes
ENSPNAG00000017473	r3hdm2	88	93.855	ENSTNIG00000007057	r3hdm2	89	93.855	Tetraodon_nigroviridis
ENSPNAG00000017473	r3hdm2	77	64.437	ENSTBEG00000015967	R3HDM2	74	63.860	Tupaia_belangeri
ENSPNAG00000017473	r3hdm2	78	78.295	ENSTTRG00000013082	R3HDM2	93	63.128	Tursiops_truncatus
ENSPNAG00000017473	r3hdm2	95	66.535	ENSUAMG00000020913	R3HDM2	99	64.684	Ursus_americanus
ENSPNAG00000017473	r3hdm2	91	64.914	ENSUMAG00000019179	R3HDM2	81	87.283	Ursus_maritimus
ENSPNAG00000017473	r3hdm2	84	83.553	ENSVPAG00000008656	R3HDM2	84	83.838	Vicugna_pacos
ENSPNAG00000017473	r3hdm2	93	66.371	ENSVVUG00000018014	R3HDM2	96	63.740	Vulpes_vulpes
ENSPNAG00000017473	r3hdm2	99	62.269	ENSXETG00000017153	r3hdm2	99	61.255	Xenopus_tropicalis
ENSPNAG00000017473	r3hdm2	87	74.166	ENSXCOG00000013882	r3hdm2	100	72.551	Xiphophorus_couchianus
ENSPNAG00000017473	r3hdm2	100	77.215	ENSXMAG00000017978	r3hdm2	100	75.497	Xiphophorus_maculatus
ENSPNAG00000017473	r3hdm2	58	36.406	ENSXMAG00000002994	-	58	43.702	Xiphophorus_maculatus