EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017483 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 12C
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 5908 bases
Position: chrKV575449.1:772824-778731
Accession: 108434699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000011781	RNase_Zc3h12a	PF11977.8	3.1e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018856	-	2400	XM_017710029	ENSPNAP00000011781	799 (aa)	XP_017565518	-

Gene Model

Click here to download ENSPNAG00000017483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017483	-	87	49.365	ENSPNAG00000002567	zc3h12b	89	49.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017483	-	92	49.315	ENSG00000102053	ZC3H12B	93	48.190	Homo_sapiens
ENSPNAG00000017483	-	71	50.629	ENSAMEG00000006955	ZC3H12B	97	49.131	Ailuropoda_melanoleuca
ENSPNAG00000017483	-	100	52.800	ENSACIG00000005689	-	73	79.741	Amphilophus_citrinellus
ENSPNAG00000017483	-	87	49.235	ENSATEG00000011175	zc3h12b	59	59.356	Anabas_testudineus
ENSPNAG00000017483	-	92	48.941	ENSANAG00000010296	ZC3H12B	93	47.930	Aotus_nancymaae
ENSPNAG00000017483	-	87	49.418	ENSACLG00000007669	zc3h12b	65	55.755	Astatotilapia_calliptera
ENSPNAG00000017483	-	100	83.354	ENSAMXG00000038308	-	100	83.770	Astyanax_mexicanus
ENSPNAG00000017483	-	87	47.847	ENSAMXG00000011328	zc3h12b	79	47.935	Astyanax_mexicanus
ENSPNAG00000017483	-	100	86.483	ENSAMXG00000005320	-	100	87.234	Astyanax_mexicanus
ENSPNAG00000017483	-	91	49.685	ENSBTAG00000002206	ZC3H12B	92	48.553	Bos_taurus
ENSPNAG00000017483	-	92	48.771	ENSCJAG00000001427	ZC3H12B	95	47.772	Callithrix_jacchus
ENSPNAG00000017483	-	87	49.150	ENSCAFG00000031307	ZC3H12B	89	48.090	Canis_familiaris
ENSPNAG00000017483	-	87	49.150	ENSCAFG00020017995	ZC3H12B	89	48.090	Canis_lupus_dingo
ENSPNAG00000017483	-	66	48.041	ENSCHIG00000011723	ZC3H12B	95	46.520	Capra_hircus
ENSPNAG00000017483	-	92	48.622	ENSTSYG00000011302	ZC3H12B	89	49.275	Carlito_syrichta
ENSPNAG00000017483	-	69	44.625	ENSCAPG00000000650	ZC3H12B	57	51.081	Cavia_aperea
ENSPNAG00000017483	-	92	48.817	ENSCCAG00000030171	ZC3H12B	93	47.815	Cebus_capucinus
ENSPNAG00000017483	-	92	49.066	ENSCATG00000044845	ZC3H12B	93	48.055	Cercocebus_atys
ENSPNAG00000017483	-	87	50.195	ENSCPBG00000006983	ZC3H12B	63	56.903	Chrysemys_picta_bellii
ENSPNAG00000017483	-	92	49.066	ENSCANG00000006746	ZC3H12B	93	48.055	Colobus_angolensis_palliatus
ENSPNAG00000017483	-	87	49.869	ENSCGRG00001018643	Zc3h12b	59	57.778	Cricetulus_griseus_chok1gshd
ENSPNAG00000017483	-	87	49.869	ENSCGRG00000015623	Zc3h12b	59	57.778	Cricetulus_griseus_crigri
ENSPNAG00000017483	-	87	49.677	ENSCSEG00000013686	zc3h12b	60	59.438	Cynoglossus_semilaevis
ENSPNAG00000017483	-	87	48.167	ENSCVAG00000010473	zc3h12b	58	58.954	Cyprinodon_variegatus
ENSPNAG00000017483	-	83	50.267	ENSDARG00000062463	zc3h12b	54	60.746	Danio_rerio
ENSPNAG00000017483	-	87	50.467	ENSDNOG00000038439	ZC3H12B	89	49.729	Dasypus_novemcinctus
ENSPNAG00000017483	-	87	50.196	ENSDORG00000024832	Zc3h12b	59	58.400	Dipodomys_ordii
ENSPNAG00000017483	-	74	45.636	ENSETEG00000012095	ZC3H12B	83	43.884	Echinops_telfairi
ENSPNAG00000017483	-	87	46.013	ENSEASG00005006995	ZC3H12B	89	45.466	Equus_asinus_asinus
ENSPNAG00000017483	-	87	50.196	ENSECAG00000020993	ZC3H12B	76	69.531	Equus_caballus
ENSPNAG00000017483	-	87	49.624	ENSELUG00000010689	zc3h12b	83	48.058	Esox_lucius
ENSPNAG00000017483	-	92	48.148	ENSFCAG00000032299	ZC3H12B	95	47.088	Felis_catus
ENSPNAG00000017483	-	87	50.719	ENSFDAG00000014258	ZC3H12B	59	58.200	Fukomys_damarensis
ENSPNAG00000017483	-	87	48.420	ENSFHEG00000002391	zc3h12b	58	59.000	Fundulus_heteroclitus
ENSPNAG00000017483	-	99	46.799	ENSFHEG00000014717	-	75	81.728	Fundulus_heteroclitus
ENSPNAG00000017483	-	87	51.169	ENSGALG00000039391	ZC3H12B	90	50.325	Gallus_gallus
ENSPNAG00000017483	-	87	49.059	ENSGAFG00000006871	zc3h12b	63	56.752	Gambusia_affinis
ENSPNAG00000017483	-	92	55.791	ENSGAFG00000004701	-	90	56.281	Gambusia_affinis
ENSPNAG00000017483	-	75	48.692	ENSGACG00000020334	zc3h12b	51	62.437	Gasterosteus_aculeatus
ENSPNAG00000017483	-	87	50.775	ENSGAGG00000005569	ZC3H12B	63	57.090	Gopherus_agassizii
ENSPNAG00000017483	-	92	49.315	ENSGGOG00000024638	ZC3H12B	93	48.190	Gorilla_gorilla
ENSPNAG00000017483	-	87	49.418	ENSHBUG00000000645	zc3h12b	65	55.755	Haplochromis_burtoni
ENSPNAG00000017483	-	70	66.297	ENSHBUG00000003376	-	87	72.917	Haplochromis_burtoni
ENSPNAG00000017483	-	92	48.965	ENSHCOG00000008487	zc3h12b	95	48.947	Hippocampus_comes
ENSPNAG00000017483	-	51	70.752	ENSHCOG00000017425	-	77	72.297	Hippocampus_comes
ENSPNAG00000017483	-	87	49.142	ENSIPUG00000016745	zc3h12b	84	46.989	Ictalurus_punctatus
ENSPNAG00000017483	-	100	81.242	ENSIPUG00000014830	-	100	81.863	Ictalurus_punctatus
ENSPNAG00000017483	-	87	50.522	ENSSTOG00000020962	ZC3H12B	59	58.200	Ictidomys_tridecemlineatus
ENSPNAG00000017483	-	87	48.129	ENSKMAG00000004921	zc3h12b	62	55.514	Kryptolebias_marmoratus
ENSPNAG00000017483	-	89	49.189	ENSLACG00000014526	ZC3H12B	94	48.699	Latimeria_chalumnae
ENSPNAG00000017483	-	92	49.323	ENSLOCG00000014631	zc3h12b	82	49.244	Lepisosteus_oculatus
ENSPNAG00000017483	-	100	61.390	ENSLOCG00000010717	-	97	61.029	Lepisosteus_oculatus
ENSPNAG00000017483	-	92	48.589	ENSLAFG00000014891	ZC3H12B	65	54.250	Loxodonta_africana
ENSPNAG00000017483	-	92	49.066	ENSMFAG00000042237	ZC3H12B	93	48.065	Macaca_fascicularis
ENSPNAG00000017483	-	92	49.066	ENSMMUG00000012261	ZC3H12B	93	48.055	Macaca_mulatta
ENSPNAG00000017483	-	92	49.066	ENSMNEG00000043003	ZC3H12B	93	48.055	Macaca_nemestrina
ENSPNAG00000017483	-	92	49.066	ENSMLEG00000042630	ZC3H12B	93	48.055	Mandrillus_leucophaeus
ENSPNAG00000017483	-	87	49.807	ENSMAMG00000011770	zc3h12b	63	57.196	Mastacembelus_armatus
ENSPNAG00000017483	-	87	49.418	ENSMZEG00005007548	zc3h12b	65	55.755	Maylandia_zebra
ENSPNAG00000017483	-	87	51.550	ENSMGAG00000000759	ZC3H12B	94	48.967	Meleagris_gallopavo
ENSPNAG00000017483	-	87	50.131	ENSMAUG00000017800	Zc3h12b	59	58.182	Mesocricetus_auratus
ENSPNAG00000017483	-	87	49.935	ENSMICG00000010697	ZC3H12B	89	48.752	Microcebus_murinus
ENSPNAG00000017483	-	87	50.261	ENSMOCG00000000094	Zc3h12b	59	58.384	Microtus_ochrogaster
ENSPNAG00000017483	-	87	49.174	ENSMMOG00000008734	zc3h12b	59	59.553	Mola_mola
ENSPNAG00000017483	-	87	50.064	ENSMODG00000005206	ZC3H12B	91	49.347	Monodelphis_domestica
ENSPNAG00000017483	-	87	46.419	ENSMALG00000021153	zc3h12b	60	55.242	Monopterus_albus
ENSPNAG00000017483	-	99	49.715	ENSMALG00000016807	-	85	68.027	Monopterus_albus
ENSPNAG00000017483	-	87	50.263	ENSMUSG00000035045	Zc3h12b	66	91.429	Mus_musculus
ENSPNAG00000017483	-	87	50.132	MGP_PahariEiJ_G0031787	Zc3h12b	59	57.895	Mus_pahari
ENSPNAG00000017483	-	87	50.263	MGP_SPRETEiJ_G0034413	Zc3h12b	59	58.097	Mus_spretus
ENSPNAG00000017483	-	87	49.347	ENSMPUG00000001162	ZC3H12B	89	48.100	Mustela_putorius_furo
ENSPNAG00000017483	-	91	48.872	ENSMLUG00000013635	ZC3H12B	65	55.910	Myotis_lucifugus
ENSPNAG00000017483	-	87	49.159	ENSNBRG00000014889	zc3h12b	65	55.576	Neolamprologus_brichardi
ENSPNAG00000017483	-	92	49.191	ENSNLEG00000000383	ZC3H12B	93	48.190	Nomascus_leucogenys
ENSPNAG00000017483	-	74	51.351	ENSMEUG00000014075	ZC3H12B	84	50.840	Notamacropus_eugenii
ENSPNAG00000017483	-	87	49.292	ENSONIG00000012867	zc3h12b	65	56.364	Oreochromis_niloticus
ENSPNAG00000017483	-	92	48.954	ENSOCUG00000006130	ZC3H12B	95	47.842	Oryctolagus_cuniculus
ENSPNAG00000017483	-	73	76.900	ENSORLG00000009188	-	70	78.593	Oryzias_latipes
ENSPNAG00000017483	-	73	76.900	ENSORLG00020019033	-	88	76.096	Oryzias_latipes_hni
ENSPNAG00000017483	-	89	55.760	ENSORLG00015020619	-	94	75.299	Oryzias_latipes_hsok
ENSPNAG00000017483	-	99	49.327	ENSOMEG00000018642	-	77	66.434	Oryzias_melastigma
ENSPNAG00000017483	-	91	49.559	ENSOARG00000004959	ZC3H12B	92	48.428	Ovis_aries
ENSPNAG00000017483	-	92	49.315	ENSPPAG00000039530	ZC3H12B	93	48.190	Pan_paniscus
ENSPNAG00000017483	-	72	49.296	ENSPPRG00000004966	-	93	47.956	Panthera_pardus
ENSPNAG00000017483	-	71	49.605	ENSPTIG00000005571	ZC3H12B	97	48.254	Panthera_tigris_altaica
ENSPNAG00000017483	-	92	49.315	ENSPTRG00000021969	ZC3H12B	93	48.190	Pan_troglodytes
ENSPNAG00000017483	-	92	49.066	ENSPANG00000007944	ZC3H12B	93	48.055	Papio_anubis
ENSPNAG00000017483	-	87	49.487	ENSPKIG00000019893	ZC3H12B	97	48.721	Paramormyrops_kingsleyae
ENSPNAG00000017483	-	100	55.361	ENSPKIG00000012595	-	95	55.581	Paramormyrops_kingsleyae
ENSPNAG00000017483	-	87	48.866	ENSPKIG00000012946	zc3h12b	66	54.240	Paramormyrops_kingsleyae
ENSPNAG00000017483	-	91	49.630	ENSPSIG00000016853	ZC3H12B	63	56.929	Pelodiscus_sinensis
ENSPNAG00000017483	-	57	58.896	ENSPMGG00000006009	zc3h12b	94	46.863	Periophthalmus_magnuspinnatus
ENSPNAG00000017483	-	87	50.576	ENSPCIG00000020264	ZC3H12B	90	49.870	Phascolarctos_cinereus
ENSPNAG00000017483	-	87	48.628	ENSPFOG00000019365	zc3h12b	59	59.127	Poecilia_formosa
ENSPNAG00000017483	-	87	48.319	ENSPLAG00000011981	zc3h12b	55	59.127	Poecilia_latipinna
ENSPNAG00000017483	-	87	45.330	ENSPMEG00000002552	zc3h12b	57	53.968	Poecilia_mexicana
ENSPNAG00000017483	-	87	48.254	ENSPREG00000020794	zc3h12b	58	58.730	Poecilia_reticulata
ENSPNAG00000017483	-	75	50.896	ENSPPYG00000020416	ZC3H12B	84	49.551	Pongo_abelii
ENSPNAG00000017483	-	56	81.226	ENSPCAG00000016422	ZC3H12B	56	81.226	Procavia_capensis
ENSPNAG00000017483	-	87	50.327	ENSPCOG00000020467	ZC3H12B	89	49.141	Propithecus_coquereli
ENSPNAG00000017483	-	75	44.776	ENSPVAG00000017352	ZC3H12B	52	50.864	Pteropus_vampyrus
ENSPNAG00000017483	-	70	66.297	ENSPNYG00000007151	-	90	70.395	Pundamilia_nyererei
ENSPNAG00000017483	-	87	49.418	ENSPNYG00000018012	zc3h12b	65	55.755	Pundamilia_nyererei
ENSPNAG00000017483	-	87	50.132	ENSRNOG00000011508	Zc3h12b	77	69.685	Rattus_norvegicus
ENSPNAG00000017483	-	92	49.066	ENSRBIG00000036402	ZC3H12B	93	48.065	Rhinopithecus_bieti
ENSPNAG00000017483	-	92	49.066	ENSRROG00000036004	ZC3H12B	93	48.065	Rhinopithecus_roxellana
ENSPNAG00000017483	-	92	48.941	ENSSBOG00000004095	ZC3H12B	93	47.930	Saimiri_boliviensis_boliviensis
ENSPNAG00000017483	-	87	49.550	ENSSFOG00015008769	zc3h12b	95	47.555	Scleropages_formosus
ENSPNAG00000017483	-	91	46.936	ENSSFOG00015012866	ZC3H12B	93	46.970	Scleropages_formosus
ENSPNAG00000017483	-	87	49.299	ENSSMAG00000018309	zc3h12b	67	55.556	Scophthalmus_maximus
ENSPNAG00000017483	-	87	49.936	ENSSDUG00000014078	zc3h12b	84	76.316	Seriola_dumerili
ENSPNAG00000017483	-	87	49.211	ENSSPUG00000014175	ZC3H12B	65	56.046	Sphenodon_punctatus
ENSPNAG00000017483	-	87	50.394	ENSSSCG00000012367	ZC3H12B	89	49.148	Sus_scrofa
ENSPNAG00000017483	-	87	51.546	ENSTGUG00000002846	ZC3H12B	90	50.325	Taeniopygia_guttata
ENSPNAG00000017483	-	87	47.607	ENSTRUG00000012186	zc3h12b	95	47.871	Takifugu_rubripes
ENSPNAG00000017483	-	74	49.481	ENSTNIG00000011828	zc3h12b	84	49.924	Tetraodon_nigroviridis
ENSPNAG00000017483	-	70	53.469	ENSTNIG00000015684	-	99	54.484	Tetraodon_nigroviridis
ENSPNAG00000017483	-	67	51.414	ENSTBEG00000011540	ZC3H12B	82	50.658	Tupaia_belangeri
ENSPNAG00000017483	-	65	72.840	ENSTTRG00000007468	ZC3H12B	74	72.840	Tursiops_truncatus
ENSPNAG00000017483	-	95	47.557	ENSUAMG00000005098	ZC3H12B	98	46.411	Ursus_americanus
ENSPNAG00000017483	-	95	47.557	ENSUMAG00000017054	ZC3H12B	98	46.411	Ursus_maritimus
ENSPNAG00000017483	-	74	48.773	ENSVPAG00000009070	ZC3H12B	83	47.401	Vicugna_pacos
ENSPNAG00000017483	-	87	49.020	ENSVVUG00000022686	ZC3H12B	89	47.969	Vulpes_vulpes
ENSPNAG00000017483	-	91	44.691	ENSXETG00000017794	zc3h12b	63	50.277	Xenopus_tropicalis
ENSPNAG00000017483	-	87	49.298	ENSXCOG00000006151	zc3h12b	90	48.477	Xiphophorus_couchianus
ENSPNAG00000017483	-	98	47.775	ENSXCOG00000007996	-	89	77.778	Xiphophorus_couchianus
ENSPNAG00000017483	-	87	49.000	ENSXMAG00000018548	zc3h12b	89	48.604	Xiphophorus_maculatus