EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPNAG00000017484 (Gene tree)
Gene ID
108442934
Gene Symbol
-
Alias
-
Full Name
pre-mRNA processing factor 38B
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
9864 bases
Position
chrKV575796.1:90941-100804
Accession
108442934
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000011801PRP38PF03371.152.2e-5611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000036265-2522XM_017723248ENSPNAP00000011801507 (aa)XP_017578737UPI0008145E48
Gene Model
Click here to download ENSPNAG00000017484's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017484's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000017484-5685.263ENSATEG00000014482-6183.630Anabas_testudineus
ENSPNAG00000017484-5793.471ENSAMXG00000039494-5193.814Astyanax_mexicanus
ENSPNAG00000017484-5484.173ENSBTAG00000047874PRPF38B5184.286Bos_taurus
ENSPNAG00000017484-5484.173ENSCHIG00000024357-5184.286Capra_hircus
ENSPNAG00000017484-9363.095ENSCPOG00000039545-5184.643Cavia_porcellus
ENSPNAG00000017484-5385.662ENSCLAG00000005801-5184.342Chinchilla_lanigera
ENSPNAG00000017484-9563.710ENSCSEG00000015030-6183.274Cynoglossus_semilaevis
ENSPNAG00000017484-8666.143ENSETEG00000014690-6281.786Echinops_telfairi
ENSPNAG00000017484-9661.584ENSELUG00000010390-9165.455Esox_lucius
ENSPNAG00000017484-9565.226ENSGMOG00000012080-6280.345Gadus_morhua
ENSPNAG00000017484-9567.901ENSGAFG00000008943-6084.229Gambusia_affinis
ENSPNAG00000017484-5385.978ENSHGLG00000016583PRPF38B5184.643Heterocephalus_glaber_female
ENSPNAG00000017484-5385.978ENSHGLG00100015525-5184.643Heterocephalus_glaber_male
ENSPNAG00000017484-9366.109ENSHCOG00000001071-6283.274Hippocampus_comes
ENSPNAG00000017484-9563.636ENSKMAG00000005540-5982.374Kryptolebias_marmoratus
ENSPNAG00000017484-9362.076ENSLACG00000015511-5181.720Latimeria_chalumnae
ENSPNAG00000017484-5384.838ENSMOCG00000020285-5184.643Microtus_ochrogaster
ENSPNAG00000017484-9367.432ENSMMOG00000011639-6183.986Mola_mola
ENSPNAG00000017484-5385.294ENSMODG00000002350-8785.401Monodelphis_domestica
ENSPNAG00000017484-9565.923ENSMALG00000019479-6183.630Monopterus_albus
ENSPNAG00000017484-9767.535ENSONIG00000010129-6183.630Oreochromis_niloticus
ENSPNAG00000017484-8867.813ENSOANG00000007343-6584.643Ornithorhynchus_anatinus
ENSPNAG00000017484-9565.314ENSORLG00000015621-8892.157Oryzias_latipes
ENSPNAG00000017484-9565.112ENSORLG00020016276-8892.157Oryzias_latipes_hni
ENSPNAG00000017484-9565.112ENSORLG00015016270-7492.157Oryzias_latipes_hsok
ENSPNAG00000017484-9563.083ENSOMEG00000022050-9191.613Oryzias_melastigma
ENSPNAG00000017484-5384.783ENSOGAG00000027048-5184.286Otolemur_garnettii
ENSPNAG00000017484-5384.926ENSOARG00000018899-5086.194Ovis_aries
ENSPNAG00000017484-9970.226ENSPKIG00000017291-5387.500Paramormyrops_kingsleyae
ENSPNAG00000017484-9665.692ENSPKIG00000004815-5587.050Paramormyrops_kingsleyae
ENSPNAG00000017484-9569.136ENSPFOG00000004025-8192.810Poecilia_formosa
ENSPNAG00000017484-9569.342ENSPLAG00000019842-6087.097Poecilia_latipinna
ENSPNAG00000017484-9569.136ENSPMEG00000004807-5986.738Poecilia_mexicana
ENSPNAG00000017484-9567.284ENSPREG00000015599-8392.810Poecilia_reticulata
ENSPNAG00000017484-5385.455ENSRNOG00000020438Prpf38b5184.643Rattus_norvegicus
ENSPNAG00000017484-9662.044ENSSFOG00015011251-8094.156Scleropages_formosus
ENSPNAG00000017484-9567.409ENSSLDG00000023487-8392.810Seriola_lalandi_dorsalis
ENSPNAG00000017484-9468.182ENSTRUG00000011765-6182.979Takifugu_rubripes
ENSPNAG00000017484-5585.461ENSTNIG00000015299-7082.624Tetraodon_nigroviridis
ENSPNAG00000017484-5375.636ENSTBEG00000007504-5475.812Tupaia_belangeri
ENSPNAG00000017484-5384.783ENSTTRG00000006479-5184.286Tursiops_truncatus
ENSPNAG00000017484-5370.182ENSVPAG00000005541-5169.892Vicugna_pacos
ENSPNAG00000017484-9568.519ENSXCOG00000008329-6084.229Xiphophorus_couchianus
ENSPNAG00000017484-9568.519ENSXMAG00000023831-6083.871Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us