EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017502 (Gene tree)
Gene ID: 108433541
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: roquin-2-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 35627 bases
Position: chrKV575423.1:818296-853922
Accession: 108433541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030622	zf-CCCH	PF00642.24	9.7e-07	1	1
ENSPNAP00000011797	zf-CCCH	PF00642.24	1e-06	1	1
ENSPNAP00000011812	zf-CCCH	PF00642.24	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018840	-	3099	-	ENSPNAP00000030622	1032 (aa)	-	-
ENSPNAT00000036266	-	3611	XM_017708170	ENSPNAP00000011797	1059 (aa)	XP_017563659	UPI0008145647
ENSPNAT00000018911	-	3586	XM_017708171	ENSPNAP00000011812	1059 (aa)	XP_017563660	UPI0008145647

Gene Model

Click here to download ENSPNAG00000017502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017502	rc3h2	50	78.146	ENSPNAG00000023439	rc3h1a	98	77.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017502	rc3h2	88	58.537	ENSG00000056586	RC3H2	95	86.283	Homo_sapiens
ENSPNAG00000017502	rc3h2	100	62.640	ENSAPOG00000002117	rc3h2	100	63.185	Acanthochromis_polyacanthus
ENSPNAG00000017502	rc3h2	88	58.614	ENSAMEG00000006498	RC3H2	81	58.512	Ailuropoda_melanoleuca
ENSPNAG00000017502	rc3h2	100	62.941	ENSAPEG00000007757	rc3h2	100	63.325	Amphiprion_percula
ENSPNAG00000017502	rc3h2	100	62.350	ENSATEG00000019414	rc3h2	100	62.436	Anabas_testudineus
ENSPNAG00000017502	rc3h2	86	60.063	ENSAPLG00000013920	RC3H2	82	59.735	Anas_platyrhynchos
ENSPNAG00000017502	rc3h2	88	58.367	ENSANAG00000030862	RC3H2	95	86.283	Aotus_nancymaae
ENSPNAG00000017502	rc3h2	100	62.404	ENSACLG00000023136	rc3h2	100	62.489	Astatotilapia_calliptera
ENSPNAG00000017502	rc3h2	100	83.458	ENSAMXG00000006778	rc3h2	100	83.645	Astyanax_mexicanus
ENSPNAG00000017502	rc3h2	88	58.940	ENSBTAG00000023867	RC3H2	82	58.716	Bos_taurus
ENSPNAG00000017502	rc3h2	88	58.367	ENSCJAG00000020050	RC3H2	95	86.283	Callithrix_jacchus
ENSPNAG00000017502	rc3h2	88	58.410	ENSCAFG00020015288	RC3H2	95	86.283	Canis_lupus_dingo
ENSPNAG00000017502	rc3h2	88	58.782	ENSCHIG00000019319	RC3H2	84	58.512	Capra_hircus
ENSPNAG00000017502	rc3h2	80	52.403	ENSCAPG00000017086	RC3H2	93	48.982	Cavia_aperea
ENSPNAG00000017502	rc3h2	88	58.818	ENSCPOG00000008511	RC3H2	82	58.943	Cavia_porcellus
ENSPNAG00000017502	rc3h2	88	58.469	ENSCCAG00000001404	RC3H2	95	86.283	Cebus_capucinus
ENSPNAG00000017502	rc3h2	88	58.265	ENSCATG00000036655	RC3H2	95	86.283	Cercocebus_atys
ENSPNAG00000017502	rc3h2	88	58.325	ENSCLAG00000013261	RC3H2	82	58.452	Chinchilla_lanigera
ENSPNAG00000017502	rc3h2	76	55.229	ENSCSAG00000013416	RC3H2	79	55.229	Chlorocebus_sabaeus
ENSPNAG00000017502	rc3h2	88	59.979	ENSCPBG00000009811	RC3H2	82	60.267	Chrysemys_picta_bellii
ENSPNAG00000017502	rc3h2	88	58.265	ENSCANG00000043140	RC3H2	95	86.283	Colobus_angolensis_palliatus
ENSPNAG00000017502	rc3h2	88	58.487	ENSCGRG00001010006	Rc3h2	82	58.733	Cricetulus_griseus_chok1gshd
ENSPNAG00000017502	rc3h2	74	61.650	ENSCGRG00000009255	Rc3h2	77	61.939	Cricetulus_griseus_crigri
ENSPNAG00000017502	rc3h2	100	61.709	ENSCSEG00000017460	rc3h2	100	61.709	Cynoglossus_semilaevis
ENSPNAG00000017502	rc3h2	96	61.783	ENSCVAG00000012202	rc3h2	96	62.009	Cyprinodon_variegatus
ENSPNAG00000017502	rc3h2	100	67.035	ENSDARG00000063050	rc3h2	100	68.265	Danio_rerio
ENSPNAG00000017502	rc3h2	88	58.859	ENSDNOG00000014557	RC3H2	82	58.859	Dasypus_novemcinctus
ENSPNAG00000017502	rc3h2	88	58.529	ENSDORG00000006398	Rc3h2	82	58.656	Dipodomys_ordii
ENSPNAG00000017502	rc3h2	94	53.968	ENSEASG00005020897	RC3H2	94	83.982	Equus_asinus_asinus
ENSPNAG00000017502	rc3h2	88	58.512	ENSECAG00000022176	RC3H2	82	58.512	Equus_caballus
ENSPNAG00000017502	rc3h2	100	66.007	ENSELUG00000006105	rc3h2	100	66.637	Esox_lucius
ENSPNAG00000017502	rc3h2	88	58.897	ENSFCAG00000007375	RC3H2	82	58.614	Felis_catus
ENSPNAG00000017502	rc3h2	88	59.816	ENSFALG00000002011	RC3H2	82	60.143	Ficedula_albicollis
ENSPNAG00000017502	rc3h2	88	58.163	ENSFDAG00000012477	RC3H2	82	58.291	Fukomys_damarensis
ENSPNAG00000017502	rc3h2	99	61.606	ENSFHEG00000012272	rc3h2	96	62.966	Fundulus_heteroclitus
ENSPNAG00000017502	rc3h2	68	59.947	ENSGMOG00000016709	-	100	59.283	Gadus_morhua
ENSPNAG00000017502	rc3h2	86	60.622	ENSGALG00000001253	RC3H2	82	60.284	Gallus_gallus
ENSPNAG00000017502	rc3h2	96	63.000	ENSGAFG00000007679	rc3h2	100	63.000	Gambusia_affinis
ENSPNAG00000017502	rc3h2	76	64.184	ENSGACG00000017369	rc3h2	100	90.271	Gasterosteus_aculeatus
ENSPNAG00000017502	rc3h2	86	60.518	ENSGAGG00000018295	RC3H2	88	60.529	Gopherus_agassizii
ENSPNAG00000017502	rc3h2	88	58.265	ENSGGOG00000017062	RC3H2	95	86.283	Gorilla_gorilla
ENSPNAG00000017502	rc3h2	100	63.307	ENSHBUG00000003976	rc3h2	100	63.394	Haplochromis_burtoni
ENSPNAG00000017502	rc3h2	88	58.274	ENSHGLG00100018015	RC3H2	82	58.477	Heterocephalus_glaber_male
ENSPNAG00000017502	rc3h2	100	59.443	ENSHCOG00000003006	rc3h2	100	59.375	Hippocampus_comes
ENSPNAG00000017502	rc3h2	100	75.491	ENSIPUG00000021433	rc3h2	100	75.269	Ictalurus_punctatus
ENSPNAG00000017502	rc3h2	88	58.121	ENSSTOG00000010655	RC3H2	82	58.248	Ictidomys_tridecemlineatus
ENSPNAG00000017502	rc3h2	88	58.529	ENSJJAG00000022376	Rc3h2	81	58.656	Jaculus_jaculus
ENSPNAG00000017502	rc3h2	100	63.264	ENSKMAG00000010936	rc3h2	100	63.351	Kryptolebias_marmoratus
ENSPNAG00000017502	rc3h2	99	55.913	ENSLOCG00000002894	rc3h2	96	56.757	Lepisosteus_oculatus
ENSPNAG00000017502	rc3h2	88	58.614	ENSLAFG00000003521	RC3H2	82	58.614	Loxodonta_africana
ENSPNAG00000017502	rc3h2	88	58.265	ENSMFAG00000035621	RC3H2	95	86.283	Macaca_fascicularis
ENSPNAG00000017502	rc3h2	88	58.265	ENSMMUG00000021134	RC3H2	95	86.283	Macaca_mulatta
ENSPNAG00000017502	rc3h2	88	58.265	ENSMNEG00000031599	RC3H2	95	84.071	Macaca_nemestrina
ENSPNAG00000017502	rc3h2	88	58.265	ENSMLEG00000033809	RC3H2	95	86.283	Mandrillus_leucophaeus
ENSPNAG00000017502	rc3h2	100	63.221	ENSMZEG00005017019	rc3h2	100	63.307	Maylandia_zebra
ENSPNAG00000017502	rc3h2	86	60.000	ENSMGAG00000007984	RC3H2	82	59.676	Meleagris_gallopavo
ENSPNAG00000017502	rc3h2	67	60.661	ENSMAUG00000003117	Rc3h2	69	60.661	Mesocricetus_auratus
ENSPNAG00000017502	rc3h2	88	58.104	ENSMICG00000003227	RC3H2	95	86.062	Microcebus_murinus
ENSPNAG00000017502	rc3h2	88	58.274	ENSMOCG00000009592	Rc3h2	82	58.401	Microtus_ochrogaster
ENSPNAG00000017502	rc3h2	83	90.909	ENSMMOG00000021305	rc3h2	99	64.008	Mola_mola
ENSPNAG00000017502	rc3h2	86	59.255	ENSMODG00000019725	RC3H2	68	58.621	Monodelphis_domestica
ENSPNAG00000017502	rc3h2	91	56.513	MGP_CAROLIEiJ_G0023516	Rc3h2	95	86.504	Mus_caroli
ENSPNAG00000017502	rc3h2	88	59.142	ENSMUSG00000075376	Rc3h2	95	86.504	Mus_musculus
ENSPNAG00000017502	rc3h2	88	59.142	MGP_PahariEiJ_G0024969	Rc3h2	95	86.504	Mus_pahari
ENSPNAG00000017502	rc3h2	88	59.142	MGP_SPRETEiJ_G0024436	Rc3h2	95	86.504	Mus_spretus
ENSPNAG00000017502	rc3h2	88	58.919	ENSMPUG00000014141	RC3H2	82	58.919	Mustela_putorius_furo
ENSPNAG00000017502	rc3h2	86	59.524	ENSMLUG00000013992	RC3H2	81	59.045	Myotis_lucifugus
ENSPNAG00000017502	rc3h2	100	63.221	ENSNBRG00000009276	rc3h2	100	61.068	Neolamprologus_brichardi
ENSPNAG00000017502	rc3h2	88	58.128	ENSNLEG00000017204	RC3H2	95	86.283	Nomascus_leucogenys
ENSPNAG00000017502	rc3h2	53	86.957	ENSMEUG00000001299	-	51	86.957	Notamacropus_eugenii
ENSPNAG00000017502	rc3h2	69	55.344	ENSOPRG00000000135	RC3H2	55	76.808	Ochotona_princeps
ENSPNAG00000017502	rc3h2	100	62.628	ENSONIG00000003945	rc3h2	100	60.324	Oreochromis_niloticus
ENSPNAG00000017502	rc3h2	88	59.451	ENSOANG00000008194	RC3H2	90	59.451	Ornithorhynchus_anatinus
ENSPNAG00000017502	rc3h2	86	59.417	ENSOCUG00000008804	RC3H2	82	58.469	Oryctolagus_cuniculus
ENSPNAG00000017502	rc3h2	96	62.422	ENSORLG00000010018	rc3h2	96	62.466	Oryzias_latipes
ENSPNAG00000017502	rc3h2	96	62.276	ENSORLG00020013257	rc3h2	96	62.320	Oryzias_latipes_hni
ENSPNAG00000017502	rc3h2	96	62.422	ENSORLG00015001525	rc3h2	96	62.466	Oryzias_latipes_hsok
ENSPNAG00000017502	rc3h2	100	61.625	ENSOMEG00000023540	rc3h2	96	62.342	Oryzias_melastigma
ENSPNAG00000017502	rc3h2	88	58.061	ENSOGAG00000010678	RC3H2	82	58.061	Otolemur_garnettii
ENSPNAG00000017502	rc3h2	88	58.985	ENSOARG00000013965	RC3H2	81	58.716	Ovis_aries
ENSPNAG00000017502	rc3h2	88	58.163	ENSPPAG00000036013	RC3H2	95	86.062	Pan_paniscus
ENSPNAG00000017502	rc3h2	88	58.571	ENSPPRG00000008698	RC3H2	91	58.512	Panthera_pardus
ENSPNAG00000017502	rc3h2	88	58.571	ENSPTIG00000014257	RC3H2	91	58.512	Panthera_tigris_altaica
ENSPNAG00000017502	rc3h2	88	58.163	ENSPTRG00000021339	RC3H2	95	86.062	Pan_troglodytes
ENSPNAG00000017502	rc3h2	88	56.633	ENSPANG00000025840	RC3H2	94	82.743	Papio_anubis
ENSPNAG00000017502	rc3h2	99	62.545	ENSPKIG00000021910	rc3h2	96	62.455	Paramormyrops_kingsleyae
ENSPNAG00000017502	rc3h2	86	60.436	ENSPSIG00000005393	RC3H2	82	59.959	Pelodiscus_sinensis
ENSPNAG00000017502	rc3h2	86	89.367	ENSPMGG00000023963	rc3h2	94	89.391	Periophthalmus_magnuspinnatus
ENSPNAG00000017502	rc3h2	88	58.628	ENSPEMG00000023441	Rc3h2	82	58.753	Peromyscus_maniculatus_bairdii
ENSPNAG00000017502	rc3h2	86	59.443	ENSPCIG00000025559	RC3H2	82	58.806	Phascolarctos_cinereus
ENSPNAG00000017502	rc3h2	97	63.291	ENSPFOG00000019699	rc3h2	97	65.209	Poecilia_formosa
ENSPNAG00000017502	rc3h2	92	63.300	ENSPLAG00000005799	rc3h2	97	63.100	Poecilia_latipinna
ENSPNAG00000017502	rc3h2	97	62.826	ENSPMEG00000014187	rc3h2	96	62.899	Poecilia_mexicana
ENSPNAG00000017502	rc3h2	99	61.951	ENSPREG00000008979	rc3h2	96	62.786	Poecilia_reticulata
ENSPNAG00000017502	rc3h2	72	74.704	ENSPCAG00000010154	RC3H2	68	74.704	Procavia_capensis
ENSPNAG00000017502	rc3h2	100	62.521	ENSPNYG00000012063	rc3h2	100	62.606	Pundamilia_nyererei
ENSPNAG00000017502	rc3h2	88	59.346	ENSRNOG00000009196	Rc3h2	85	59.470	Rattus_norvegicus
ENSPNAG00000017502	rc3h2	88	58.163	ENSRBIG00000032579	RC3H2	95	86.283	Rhinopithecus_bieti
ENSPNAG00000017502	rc3h2	88	58.265	ENSRROG00000043784	RC3H2	95	86.283	Rhinopithecus_roxellana
ENSPNAG00000017502	rc3h2	88	58.689	ENSSBOG00000029100	RC3H2	95	85.746	Saimiri_boliviensis_boliviensis
ENSPNAG00000017502	rc3h2	88	59.026	ENSSHAG00000007498	RC3H2	82	58.026	Sarcophilus_harrisii
ENSPNAG00000017502	rc3h2	100	61.843	ENSSMAG00000020048	rc3h2	100	61.499	Scophthalmus_maximus
ENSPNAG00000017502	rc3h2	100	63.373	ENSSDUG00000016022	rc3h2	100	63.333	Seriola_dumerili
ENSPNAG00000017502	rc3h2	100	63.504	ENSSLDG00000016070	rc3h2	100	63.636	Seriola_lalandi_dorsalis
ENSPNAG00000017502	rc3h2	88	58.427	ENSSARG00000012329	RC3H2	81	58.427	Sorex_araneus
ENSPNAG00000017502	rc3h2	88	59.045	ENSSPUG00000001457	RC3H2	81	59.188	Sphenodon_punctatus
ENSPNAG00000017502	rc3h2	100	63.194	ENSSPAG00000005233	rc3h2	100	63.450	Stegastes_partitus
ENSPNAG00000017502	rc3h2	88	58.537	ENSSSCG00000005575	RC3H2	93	86.062	Sus_scrofa
ENSPNAG00000017502	rc3h2	88	59.714	ENSTGUG00000006889	-	82	60.041	Taeniopygia_guttata
ENSPNAG00000017502	rc3h2	86	61.287	ENSTNIG00000004942	rc3h2	99	61.578	Tetraodon_nigroviridis
ENSPNAG00000017502	rc3h2	73	60.780	ENSTBEG00000009622	RC3H2	78	61.145	Tupaia_belangeri
ENSPNAG00000017502	rc3h2	81	65.600	ENSTTRG00000016954	RC3H2	74	65.600	Tursiops_truncatus
ENSPNAG00000017502	rc3h2	88	58.940	ENSUAMG00000015355	RC3H2	82	58.554	Ursus_americanus
ENSPNAG00000017502	rc3h2	88	58.614	ENSUMAG00000003161	RC3H2	95	86.283	Ursus_maritimus
ENSPNAG00000017502	rc3h2	88	58.919	ENSVPAG00000005994	RC3H2	81	58.919	Vicugna_pacos
ENSPNAG00000017502	rc3h2	88	58.512	ENSVVUG00000009519	RC3H2	84	58.410	Vulpes_vulpes
ENSPNAG00000017502	rc3h2	98	62.066	ENSXCOG00000005002	rc3h2	96	89.111	Xiphophorus_couchianus
ENSPNAG00000017502	rc3h2	99	61.659	ENSXMAG00000001724	rc3h2	96	62.568	Xiphophorus_maculatus