EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017596 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 3696 bases
Position: chrKV578168.1:2446-6141
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030715	RVT_1	PF00078.27	4.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000019017	-	2889	-	ENSPNAP00000030715	962 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000017596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017596	-	95	76.318	ENSPNAG00000003539	-	82	76.318
ENSPNAG00000017596	-	97	67.632	ENSPNAG00000007038	-	84	67.632
ENSPNAG00000017596	-	97	70.309	ENSPNAG00000014625	-	85	70.309
ENSPNAG00000017596	-	95	83.622	ENSPNAG00000016635	-	82	83.622
ENSPNAG00000017596	-	92	69.488	ENSPNAG00000021754	-	81	69.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017596	-	88	33.673	ENSACIG00000012161	-	77	33.673	Amphilophus_citrinellus
ENSPNAG00000017596	-	78	35.598	ENSACIG00000010787	-	75	35.598	Amphilophus_citrinellus
ENSPNAG00000017596	-	68	41.053	ENSACIG00000013116	-	64	40.896	Amphilophus_citrinellus
ENSPNAG00000017596	-	88	36.983	ENSACIG00000007038	-	76	36.618	Amphilophus_citrinellus
ENSPNAG00000017596	-	74	40.966	ENSACIG00000009025	-	78	40.966	Amphilophus_citrinellus
ENSPNAG00000017596	-	83	48.649	ENSAMXG00000042811	-	70	48.649	Astyanax_mexicanus
ENSPNAG00000017596	-	81	44.012	ENSCPBG00000003842	-	60	44.012	Chrysemys_picta_bellii
ENSPNAG00000017596	-	84	33.413	ENSCVAG00000004138	-	78	33.413	Cyprinodon_variegatus
ENSPNAG00000017596	-	85	39.299	ENSELUG00000004597	-	80	39.543	Esox_lucius
ENSPNAG00000017596	-	79	40.698	ENSELUG00000004618	-	72	40.909	Esox_lucius
ENSPNAG00000017596	-	87	36.037	ENSFHEG00000007211	-	82	36.037	Fundulus_heteroclitus
ENSPNAG00000017596	-	87	30.787	ENSFHEG00000002865	-	73	30.787	Fundulus_heteroclitus
ENSPNAG00000017596	-	88	33.179	ENSFHEG00000002853	-	75	33.179	Fundulus_heteroclitus
ENSPNAG00000017596	-	88	35.927	ENSFHEG00000022106	-	80	35.698	Fundulus_heteroclitus
ENSPNAG00000017596	-	62	38.907	ENSGMOG00000005227	-	99	38.907	Gadus_morhua
ENSPNAG00000017596	-	90	36.559	ENSHCOG00000007397	-	80	36.559	Hippocampus_comes
ENSPNAG00000017596	-	80	39.242	ENSHCOG00000000471	-	63	39.242	Hippocampus_comes
ENSPNAG00000017596	-	79	39.844	ENSHCOG00000007436	-	82	30.387	Hippocampus_comes
ENSPNAG00000017596	-	88	38.222	ENSHCOG00000007389	-	78	38.222	Hippocampus_comes
ENSPNAG00000017596	-	58	39.558	ENSLBEG00000006732	-	63	39.558	Labrus_bergylta
ENSPNAG00000017596	-	59	38.261	ENSLBEG00000003745	-	66	38.261	Labrus_bergylta
ENSPNAG00000017596	-	61	38.889	ENSLBEG00000004576	-	64	39.803	Labrus_bergylta
ENSPNAG00000017596	-	68	33.634	ENSLACG00000006357	-	80	33.634	Latimeria_chalumnae
ENSPNAG00000017596	-	56	43.623	ENSLOCG00000002743	-	99	43.623	Lepisosteus_oculatus
ENSPNAG00000017596	-	76	44.468	ENSLOCG00000011928	-	67	44.468	Lepisosteus_oculatus
ENSPNAG00000017596	-	79	43.405	ENSLOCG00000017064	-	69	43.405	Lepisosteus_oculatus
ENSPNAG00000017596	-	68	41.018	ENSMAMG00000019985	-	55	41.168	Mastacembelus_armatus
ENSPNAG00000017596	-	90	36.789	ENSONIG00000020875	-	76	36.789	Oreochromis_niloticus
ENSPNAG00000017596	-	68	35.241	ENSOMEG00000015368	-	84	30.752	Oryzias_melastigma
ENSPNAG00000017596	-	78	32.185	ENSPMGG00000017392	-	78	32.185	Periophthalmus_magnuspinnatus
ENSPNAG00000017596	-	78	37.429	ENSPMGG00000001593	-	77	37.429	Periophthalmus_magnuspinnatus
ENSPNAG00000017596	-	68	40.487	ENSPLAG00000011810	-	60	40.487	Poecilia_latipinna
ENSPNAG00000017596	-	86	33.372	ENSPLAG00000011817	-	82	33.604	Poecilia_latipinna
ENSPNAG00000017596	-	67	40.769	ENSPLAG00000023379	-	77	40.769	Poecilia_latipinna
ENSPNAG00000017596	-	67	40.644	ENSPLAG00000022994	-	60	40.644	Poecilia_latipinna
ENSPNAG00000017596	-	67	36.210	ENSPMEG00000008574	-	58	36.210	Poecilia_mexicana
ENSPNAG00000017596	-	87	35.589	ENSPMEG00000003431	-	80	35.581	Poecilia_mexicana
ENSPNAG00000017596	-	91	35.197	ENSPREG00000012484	-	77	35.197	Poecilia_reticulata
ENSPNAG00000017596	-	89	32.694	ENSPREG00000005456	-	74	32.694	Poecilia_reticulata
ENSPNAG00000017596	-	88	34.096	ENSPREG00000005756	-	78	34.096	Poecilia_reticulata
ENSPNAG00000017596	-	68	41.061	ENSXCOG00000008881	-	72	41.061	Xiphophorus_couchianus
ENSPNAG00000017596	-	86	46.646	ENSXCOG00000013093	-	71	46.646	Xiphophorus_couchianus
ENSPNAG00000017596	-	88	35.789	ENSXMAG00000028672	-	76	35.789	Xiphophorus_maculatus