EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000017620 (Gene tree)
Gene ID
108437489
Gene Symbol
u2af2a
Alias
zgc:110115
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Minus strand
Length
14258 bases
Position
chrKV575521.1:1212869-1227126
Accession
108437489
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000011907RRM_1PF00076.223.3e-3513
ENSPNAP00000011907RRM_1PF00076.223.3e-3523
ENSPNAP00000011907RRM_1PF00076.223.3e-3533
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000019075-5317XM_017714610ENSPNAP00000011907463 (aa)XP_017570099UPI0008145DB6
Gene Model
Click here to download ENSPNAG00000017620's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017620's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000017620u2af2a9991.991ENSPNAG00000027289u2af2b9990.909
ENSPNAG00000017620u2af2a9973.036ENSPNAG00000007182-10071.398
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000017620u2af2a10085.447ENSG00000063244U2AF210093.831Homo_sapiens
ENSPNAG00000017620u2af2a9973.617ENSAPOG00000002208-10071.822Acanthochromis_polyacanthus
ENSPNAG00000017620u2af2a6791.667ENSAPOG00000023155u2af2a10091.667Acanthochromis_polyacanthus
ENSPNAG00000017620u2af2a8088.679ENSAMEG00000003864U2AF28292.920Ailuropoda_melanoleuca
ENSPNAG00000017620u2af2a8396.859ENSACIG00000005749u2af2a9595.366Amphilophus_citrinellus
ENSPNAG00000017620u2af2a9371.922ENSACIG00000014173-8380.000Amphilophus_citrinellus
ENSPNAG00000017620u2af2a9973.617ENSAOCG00000003595-10071.822Amphiprion_ocellaris
ENSPNAG00000017620u2af2a9990.693ENSAOCG00000015571u2af2a10093.074Amphiprion_ocellaris
ENSPNAG00000017620u2af2a8397.120ENSAPEG00000009376u2af2a9097.120Amphiprion_percula
ENSPNAG00000017620u2af2a9472.985ENSAPEG00000020062-8182.152Amphiprion_percula
ENSPNAG00000017620u2af2a10091.368ENSATEG00000022332u2af2a10089.873Anabas_testudineus
ENSPNAG00000017620u2af2a9373.568ENSATEG00000020577-8382.415Anabas_testudineus
ENSPNAG00000017620u2af2a10087.500ENSACAG00000015489U2AF210086.920Anolis_carolinensis
ENSPNAG00000017620u2af2a10083.152ENSANAG00000028042U2AF210091.071Aotus_nancymaae
ENSPNAG00000017620u2af2a10089.831ENSACLG00000022181u2af2a9595.366Astatotilapia_calliptera
ENSPNAG00000017620u2af2a9973.617ENSACLG00000020793-10071.822Astatotilapia_calliptera
ENSPNAG00000017620u2af2a9990.909ENSAMXG00000039454u2af2b9989.827Astyanax_mexicanus
ENSPNAG00000017620u2af2a10095.551ENSAMXG00000033347u2af2a10095.551Astyanax_mexicanus
ENSPNAG00000017620u2af2a10088.553ENSBTAG00000002830U2AF210087.905Bos_taurus
ENSPNAG00000017620u2af2a8658.458WBGene00006697uaf-110054.305Caenorhabditis_elegans
ENSPNAG00000017620u2af2a10084.948ENSCJAG00000017128U2AF210085.744Callithrix_jacchus
ENSPNAG00000017620u2af2a10085.447ENSCAFG00000002551U2AF210086.258Canis_familiaris
ENSPNAG00000017620u2af2a8693.017ENSCAFG00020015445U2AF28193.782Canis_lupus_dingo
ENSPNAG00000017620u2af2a8677.723ENSCHIG00000023595U2AF28478.149Capra_hircus
ENSPNAG00000017620u2af2a10084.948ENSTSYG00000007432U2AF210085.744Carlito_syrichta
ENSPNAG00000017620u2af2a8989.952ENSCAPG00000008466U2AF28493.782Cavia_aperea
ENSPNAG00000017620u2af2a10084.948ENSCPOG00000001582U2AF210085.744Cavia_porcellus
ENSPNAG00000017620u2af2a10084.948ENSCCAG00000023336U2AF210085.744Cebus_capucinus
ENSPNAG00000017620u2af2a10085.447ENSCATG00000004637U2AF210086.258Cercocebus_atys
ENSPNAG00000017620u2af2a10085.447ENSCLAG00000000596U2AF210086.258Chinchilla_lanigera
ENSPNAG00000017620u2af2a10085.447ENSCSAG00000001722U2AF210086.258Chlorocebus_sabaeus
ENSPNAG00000017620u2af2a8591.250ENSCPBG00000004485U2AF210093.831Chrysemys_picta_bellii
ENSPNAG00000017620u2af2a8469.821ENSCING00000003455-8467.726Ciona_intestinalis
ENSPNAG00000017620u2af2a8468.286ENSCSAVG00000006813-9163.850Ciona_savignyi
ENSPNAG00000017620u2af2a10078.794ENSCANG00000043845-10080.211Colobus_angolensis_palliatus
ENSPNAG00000017620u2af2a9184.475ENSCANG00000031002-9685.349Colobus_angolensis_palliatus
ENSPNAG00000017620u2af2a9977.662ENSCGRG00001007486-9977.848Cricetulus_griseus_chok1gshd
ENSPNAG00000017620u2af2a10088.769ENSCGRG00001003185-10088.121Cricetulus_griseus_chok1gshd
ENSPNAG00000017620u2af2a9977.662ENSCGRG00000018587-9977.848Cricetulus_griseus_crigri
ENSPNAG00000017620u2af2a5092.208ENSCGRG00000004524-7988.163Cricetulus_griseus_crigri
ENSPNAG00000017620u2af2a7394.304ENSCSEG00000018709u2af2a8794.304Cynoglossus_semilaevis
ENSPNAG00000017620u2af2a9970.576ENSCSEG00000020504-9470.085Cynoglossus_semilaevis
ENSPNAG00000017620u2af2a10090.065ENSCVAG00000001259u2af2a10092.441Cyprinodon_variegatus
ENSPNAG00000017620u2af2a9972.921ENSCVAG00000023307-10072.458Cyprinodon_variegatus
ENSPNAG00000017620u2af2a10097.204ENSDARG00000012505u2af2a10097.204Danio_rerio
ENSPNAG00000017620u2af2a10086.902ENSDARG00000011740u2af2b10085.208Danio_rerio
ENSPNAG00000017620u2af2a9184.475ENSDNOG00000047039U2AF29685.349Dasypus_novemcinctus
ENSPNAG00000017620u2af2a10084.948ENSDORG00000003250U2af210085.744Dipodomys_ordii
ENSPNAG00000017620u2af2a8650.701FBgn0034834LS28553.266Drosophila_melanogaster
ENSPNAG00000017620u2af2a9266.434FBgn0005411U2af5010070.620Drosophila_melanogaster
ENSPNAG00000017620u2af2a8973.621ENSEBUG00000010917U2AF28476.378Eptatretus_burgeri
ENSPNAG00000017620u2af2a8262.895ENSEBUG00000001732U2AF28462.992Eptatretus_burgeri
ENSPNAG00000017620u2af2a8890.557ENSEASG00005020708U2AF27693.782Equus_asinus_asinus
ENSPNAG00000017620u2af2a10088.769ENSECAG00000010110U2AF210088.121Equus_caballus
ENSPNAG00000017620u2af2a10086.481ENSELUG00000022291u2af2b10085.591Esox_lucius
ENSPNAG00000017620u2af2a9970.551ENSELUG00000018459-10070.127Esox_lucius
ENSPNAG00000017620u2af2a10090.041ENSELUG00000015850u2af2a10089.419Esox_lucius
ENSPNAG00000017620u2af2a10084.948ENSFCAG00000011504U2AF210085.744Felis_catus
ENSPNAG00000017620u2af2a8989.952ENSFDAG00000011264U2AF28193.782Fukomys_damarensis
ENSPNAG00000017620u2af2a10090.065ENSFHEG00000016025u2af2a10092.441Fundulus_heteroclitus
ENSPNAG00000017620u2af2a10091.145ENSGMOG00000004535u2af2a10091.145Gadus_morhua
ENSPNAG00000017620u2af2a9886.957ENSGALG00000052748U2AF26586.364Gallus_gallus
ENSPNAG00000017620u2af2a9973.932ENSGAFG00000005628-10072.258Gambusia_affinis
ENSPNAG00000017620u2af2a10090.065ENSGAFG00000013626u2af2a8892.441Gambusia_affinis
ENSPNAG00000017620u2af2a10094.384ENSGACG00000010632U2AF210094.168Gasterosteus_aculeatus
ENSPNAG00000017620u2af2a9971.967ENSGACG00000014500-10071.789Gasterosteus_aculeatus
ENSPNAG00000017620u2af2a6793.831ENSGAGG00000011849U2AF210093.831Gopherus_agassizii
ENSPNAG00000017620u2af2a5682.171ENSGGOG00000036399-9682.171Gorilla_gorilla
ENSPNAG00000017620u2af2a10089.831ENSHBUG00000013935u2af2a9595.366Haplochromis_burtoni
ENSPNAG00000017620u2af2a9973.617ENSHBUG00000017424-10071.822Haplochromis_burtoni
ENSPNAG00000017620u2af2a10084.948ENSHGLG00000005889U2AF210085.744Heterocephalus_glaber_female
ENSPNAG00000017620u2af2a8989.952ENSHGLG00100004757U2AF28493.782Heterocephalus_glaber_male
ENSPNAG00000017620u2af2a10092.324ENSHCOG00000019367u2af2a10092.111Hippocampus_comes
ENSPNAG00000017620u2af2a9990.385ENSIPUG00000009077u2af29989.530Ictalurus_punctatus
ENSPNAG00000017620u2af2a9972.944ENSIPUG00000009844-10069.481Ictalurus_punctatus
ENSPNAG00000017620u2af2a10095.680ENSIPUG00000007717u2af2a10095.680Ictalurus_punctatus
ENSPNAG00000017620u2af2a10084.948ENSSTOG00000019595U2AF210085.744Ictidomys_tridecemlineatus
ENSPNAG00000017620u2af2a10084.948ENSJJAG00000017705U2af210085.744Jaculus_jaculus
ENSPNAG00000017620u2af2a10090.526ENSKMAG00000005960u2af2a10089.030Kryptolebias_marmoratus
ENSPNAG00000017620u2af2a9371.274ENSLBEG00000005001-8379.744Labrus_bergylta
ENSPNAG00000017620u2af2a10091.579ENSLBEG00000016162u2af2a10093.089Labrus_bergylta
ENSPNAG00000017620u2af2a7994.022ENSLACG00000001648U2AF210094.022Latimeria_chalumnae
ENSPNAG00000017620u2af2a6095.668ENSLOCG00000008050u2af2b8492.150Lepisosteus_oculatus
ENSPNAG00000017620u2af2a9972.553ENSLOCG00000010843-10072.766Lepisosteus_oculatus
ENSPNAG00000017620u2af2a10076.533ENSLAFG00000028496-10076.533Loxodonta_africana
ENSPNAG00000017620u2af2a10085.270ENSLAFG00000018056-10086.892Loxodonta_africana
ENSPNAG00000017620u2af2a10084.948ENSMFAG00000038383U2AF210085.744Macaca_fascicularis
ENSPNAG00000017620u2af2a10084.742ENSMMUG00000004810U2AF210085.535Macaca_mulatta
ENSPNAG00000017620u2af2a10085.447ENSMNEG00000042096U2AF210086.258Macaca_nemestrina
ENSPNAG00000017620u2af2a8990.580ENSMLEG00000032219U2AF27494.503Mandrillus_leucophaeus
ENSPNAG00000017620u2af2a9972.128ENSMAMG00000020158-10070.339Mastacembelus_armatus
ENSPNAG00000017620u2af2a10092.111ENSMAMG00000019817u2af2a10091.471Mastacembelus_armatus
ENSPNAG00000017620u2af2a10090.497ENSMZEG00005016563u2af2a10092.873Maylandia_zebra
ENSPNAG00000017620u2af2a9973.617ENSMZEG00005023318-10071.822Maylandia_zebra
ENSPNAG00000017620u2af2a8989.952ENSMAUG00000008180U2af28293.782Mesocricetus_auratus
ENSPNAG00000017620u2af2a10085.447ENSMICG00000027681U2AF210086.258Microcebus_murinus
ENSPNAG00000017620u2af2a10084.948ENSMOCG00000013214-10085.744Microtus_ochrogaster
ENSPNAG00000017620u2af2a10078.891ENSMOCG00000007227-10078.678Microtus_ochrogaster
ENSPNAG00000017620u2af2a6790.909ENSMOCG00000001018-10090.909Microtus_ochrogaster
ENSPNAG00000017620u2af2a8397.382ENSMMOG00000016600u2af2a9496.098Mola_mola
ENSPNAG00000017620u2af2a9967.437ENSMMOG00000000531-8476.456Mola_mola
ENSPNAG00000017620u2af2a10093.089ENSMALG00000009985u2af2a10092.441Monopterus_albus
ENSPNAG00000017620u2af2a10085.447MGP_CAROLIEiJ_G0029150U2af210086.258Mus_caroli
ENSPNAG00000017620u2af2a10085.447ENSMUSG00000030435U2af210093.831Mus_musculus
ENSPNAG00000017620u2af2a10085.447MGP_PahariEiJ_G0021017U2af210086.258Mus_pahari
ENSPNAG00000017620u2af2a10085.447MGP_SPRETEiJ_G0030203U2af210086.258Mus_spretus
ENSPNAG00000017620u2af2a10085.447ENSMPUG00000007135U2AF210086.258Mustela_putorius_furo
ENSPNAG00000017620u2af2a5187.190ENSMLUG00000011051-10087.190Myotis_lucifugus
ENSPNAG00000017620u2af2a10084.742ENSNGAG00000020369U2af210085.744Nannospalax_galili
ENSPNAG00000017620u2af2a9371.922ENSNBRG00000011100-8380.256Neolamprologus_brichardi
ENSPNAG00000017620u2af2a10089.831ENSNBRG00000002568u2af2a9595.366Neolamprologus_brichardi
ENSPNAG00000017620u2af2a10075.053ENSNLEG00000010562U2AF210093.831Nomascus_leucogenys
ENSPNAG00000017620u2af2a8578.934ENSMEUG00000002346U2AF28479.581Notamacropus_eugenii
ENSPNAG00000017620u2af2a9963.913ENSODEG00000009254-10063.913Octodon_degus
ENSPNAG00000017620u2af2a10080.000ENSODEG00000012729-10080.713Octodon_degus
ENSPNAG00000017620u2af2a9973.617ENSONIG00000009682-10071.822Oreochromis_niloticus
ENSPNAG00000017620u2af2a10090.795ENSONIG00000012793u2af2a10089.308Oreochromis_niloticus
ENSPNAG00000017620u2af2a10090.526ENSORLG00000011545u2af2a9394.634Oryzias_latipes
ENSPNAG00000017620u2af2a10090.526ENSORLG00020006941u2af2a9394.634Oryzias_latipes_hni
ENSPNAG00000017620u2af2a10090.526ENSORLG00015012843u2af2a10087.553Oryzias_latipes_hsok
ENSPNAG00000017620u2af2a10090.316ENSOMEG00000011386u2af2a9494.634Oryzias_melastigma
ENSPNAG00000017620u2af2a10084.948ENSOGAG00000007206-10085.744Otolemur_garnettii
ENSPNAG00000017620u2af2a9655.234ENSOGAG00000034729-8061.930Otolemur_garnettii
ENSPNAG00000017620u2af2a10077.778ENSOARG00000001091U2AF210076.971Ovis_aries
ENSPNAG00000017620u2af2a10084.948ENSPPAG00000039782U2AF210085.744Pan_paniscus
ENSPNAG00000017620u2af2a10084.948ENSPPRG00000013843U2AF210085.744Panthera_pardus
ENSPNAG00000017620u2af2a9878.132ENSPTIG00000005489U2AF28488.630Panthera_tigris_altaica
ENSPNAG00000017620u2af2a10084.948ENSPTRG00000011523U2AF210093.831Pan_troglodytes
ENSPNAG00000017620u2af2a10085.447ENSPANG00000008459U2AF210086.258Papio_anubis
ENSPNAG00000017620u2af2a10088.655ENSPKIG00000024346u2af2b8896.073Paramormyrops_kingsleyae
ENSPNAG00000017620u2af2a9972.479ENSPKIG00000014878-10071.398Paramormyrops_kingsleyae
ENSPNAG00000017620u2af2a8671.359ENSPSIG00000008014U2AF28471.537Pelodiscus_sinensis
ENSPNAG00000017620u2af2a8388.520ENSPMGG00000022980u2af2a9387.619Periophthalmus_magnuspinnatus
ENSPNAG00000017620u2af2a10084.948ENSPEMG00000007378U2af210093.831Peromyscus_maniculatus_bairdii
ENSPNAG00000017620u2af2a8276.364ENSPMAG00000004097u2af2a8477.720Petromyzon_marinus
ENSPNAG00000017620u2af2a10084.536ENSPCIG00000018013U2AF210085.535Phascolarctos_cinereus
ENSPNAG00000017620u2af2a9973.218ENSPFOG00000006433-10072.727Poecilia_formosa
ENSPNAG00000017620u2af2a9989.809ENSPFOG00000010799u2af2a10089.429Poecilia_formosa
ENSPNAG00000017620u2af2a8680.151ENSPLAG00000003275-8481.365Poecilia_latipinna
ENSPNAG00000017620u2af2a10090.065ENSPLAG00000014365u2af2a10092.441Poecilia_latipinna
ENSPNAG00000017620u2af2a8679.899ENSPMEG00000003734-8481.102Poecilia_mexicana
ENSPNAG00000017620u2af2a10090.065ENSPMEG00000002969u2af2a10092.441Poecilia_mexicana
ENSPNAG00000017620u2af2a9972.766ENSPREG00000013036-10073.154Poecilia_reticulata
ENSPNAG00000017620u2af2a10089.831ENSPREG00000008739u2af2a10089.451Poecilia_reticulata
ENSPNAG00000017620u2af2a5991.636ENSPPYG00000010429-7891.007Pongo_abelii
ENSPNAG00000017620u2af2a8578.426ENSPCAG00000003709-9379.528Procavia_capensis
ENSPNAG00000017620u2af2a10069.342ENSPCAG00000014399-10069.874Procavia_capensis
ENSPNAG00000017620u2af2a10084.948ENSPCOG00000025870U2AF210085.744Propithecus_coquereli
ENSPNAG00000017620u2af2a10084.536ENSPVAG00000004540U2AF210085.325Pteropus_vampyrus
ENSPNAG00000017620u2af2a9973.617ENSPNYG00000011605-10071.822Pundamilia_nyererei
ENSPNAG00000017620u2af2a10089.831ENSPNYG00000001438u2af2a9595.366Pundamilia_nyererei
ENSPNAG00000017620u2af2a10085.447ENSRNOG00000015914U2af210086.258Rattus_norvegicus
ENSPNAG00000017620u2af2a10084.742ENSRBIG00000041018U2AF210085.535Rhinopithecus_bieti
ENSPNAG00000017620u2af2a8089.572ENSRROG00000031103-8293.860Rhinopithecus_roxellana
ENSPNAG00000017620u2af2a10080.249ENSRROG00000031238-10081.184Rhinopithecus_roxellana
ENSPNAG00000017620u2af2a10085.447ENSSBOG00000023891U2AF210086.258Saimiri_boliviensis_boliviensis
ENSPNAG00000017620u2af2a5279.791ENSSHAG00000001167U2AF28668.351Sarcophilus_harrisii
ENSPNAG00000017620u2af2a9973.729ENSSFOG00015003884-9181.365Scleropages_formosus
ENSPNAG00000017620u2af2a8695.000ENSSFOG00015019182u2af2b8695.812Scleropages_formosus
ENSPNAG00000017620u2af2a9972.034ENSSMAG00000013779-10071.610Scophthalmus_maximus
ENSPNAG00000017620u2af2a10092.657ENSSMAG00000012582u2af2a10092.225Scophthalmus_maximus
ENSPNAG00000017620u2af2a9371.613ENSSDUG00000021434-7979.847Seriola_dumerili
ENSPNAG00000017620u2af2a9990.476ENSSDUG00000009457u2af2a10092.857Seriola_dumerili
ENSPNAG00000017620u2af2a10090.497ENSSLDG00000022742u2af2a10092.873Seriola_lalandi_dorsalis
ENSPNAG00000017620u2af2a9371.613ENSSLDG00000016151-8379.847Seriola_lalandi_dorsalis
ENSPNAG00000017620u2af2a10085.535ENSSPUG00000010229U2AF210086.013Sphenodon_punctatus
ENSPNAG00000017620u2af2a10090.042ENSSPAG00000022519u2af2a10090.084Stegastes_partitus
ENSPNAG00000017620u2af2a9973.830ENSSPAG00000005241-10072.034Stegastes_partitus
ENSPNAG00000017620u2af2a10088.769ENSSSCG00000034815U2AF210088.121Sus_scrofa
ENSPNAG00000017620u2af2a9788.814ENSTRUG00000005514u2af2a9193.659Takifugu_rubripes
ENSPNAG00000017620u2af2a9972.138ENSTNIG00000011257-10071.552Tetraodon_nigroviridis
ENSPNAG00000017620u2af2a10091.772ENSTNIG00000008106U2AF210090.063Tetraodon_nigroviridis
ENSPNAG00000017620u2af2a8085.333ENSTBEG00000009104U2AF29289.213Tupaia_belangeri
ENSPNAG00000017620u2af2a10084.948ENSTTRG00000000987U2AF210085.744Tursiops_truncatus
ENSPNAG00000017620u2af2a8693.000ENSUAMG00000019883U2AF28593.782Ursus_americanus
ENSPNAG00000017620u2af2a8693.000ENSUMAG00000024586U2AF210093.831Ursus_maritimus
ENSPNAG00000017620u2af2a8990.580ENSVVUG00000006956U2AF25794.503Vulpes_vulpes
ENSPNAG00000017620u2af2a10086.441ENSXETG00000019128u2af210086.229Xenopus_tropicalis
ENSPNAG00000017620u2af2a8396.597ENSXCOG00000019406u2af2a9395.122Xiphophorus_couchianus
ENSPNAG00000017620u2af2a10090.065ENSXMAG00000011979u2af2a10092.441Xiphophorus_maculatus
ENSPNAG00000017620u2af2a9972.553ENSXMAG00000000768-9672.034Xiphophorus_maculatus

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