EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000017679 (Gene tree)
Gene ID
108410636
Gene Symbol
cnot3a
Alias
fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
8404 bases
Position
chrKV575975.1:221740-230143
Accession
108410636
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000030750Not3PF04065.151.7e-9611
ENSPNAP00000011921Not3PF04065.152.4e-9611
ENSPNAP00000030750NOT2_3_5PF04153.181.3e-3911
ENSPNAP00000011921NOT2_3_5PF04153.181.5e-3911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000019076-2964XM_017681811ENSPNAP00000011921912 (aa)XP_017537300UPI0008146614
ENSPNAT00000036309-2178-ENSPNAP00000030750725 (aa)--
Gene Model
Click here to download ENSPNAG00000017679's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017679's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000017679cnot3a9292.917ENSPNAG00000027459cnot3b10064.968
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000017679cnot3a7871.891ENSG00000088038CNOT310094.845Homo_sapiens
ENSPNAG00000017679cnot3a5896.186ENSAPOG00000015499CNOT39284.286Acanthochromis_polyacanthus
ENSPNAG00000017679cnot3a5885.085ENSAPOG00000015002cnot3b7688.809Acanthochromis_polyacanthus
ENSPNAG00000017679cnot3a7288.065ENSAMEG00000004528CNOT37689.180Ailuropoda_melanoleuca
ENSPNAG00000017679cnot3a9795.798ENSACIG00000006635cnot3a9996.581Amphilophus_citrinellus
ENSPNAG00000017679cnot3a7393.304ENSACIG00000003652cnot3b9993.304Amphilophus_citrinellus
ENSPNAG00000017679cnot3a7486.111ENSAOCG00000018385-9977.512Amphiprion_ocellaris
ENSPNAG00000017679cnot3a6294.583ENSAOCG00000023769cnot3a9971.582Amphiprion_ocellaris
ENSPNAG00000017679cnot3a8294.286ENSAPEG00000002640cnot3b9994.286Amphiprion_percula
ENSPNAG00000017679cnot3a6394.583ENSAPEG00000006624cnot3a10076.515Amphiprion_percula
ENSPNAG00000017679cnot3a10075.403ENSATEG00000022737cnot3a10077.503Anabas_testudineus
ENSPNAG00000017679cnot3a10068.625ENSATEG00000015777cnot3b10067.647Anabas_testudineus
ENSPNAG00000017679cnot3a7288.961ENSACAG00000016085CNOT39089.180Anolis_carolinensis
ENSPNAG00000017679cnot3a7675.064ENSANAG00000025756CNOT37888.852Aotus_nancymaae
ENSPNAG00000017679cnot3a10075.000ENSACLG00000021136cnot3a10074.166Astatotilapia_calliptera
ENSPNAG00000017679cnot3a9494.583ENSACLG00000016702cnot3b7084.859Astatotilapia_calliptera
ENSPNAG00000017679cnot3a10094.627ENSAMXG00000012359cnot3a10094.408Astyanax_mexicanus
ENSPNAG00000017679cnot3a10063.541ENSAMXG00000009447cnot3b9592.169Astyanax_mexicanus
ENSPNAG00000017679cnot3a6887.742ENSBTAG00000014900CNOT37688.852Bos_taurus
ENSPNAG00000017679cnot3a6751.269WBGene00003826ntl-38258.025Caenorhabditis_elegans
ENSPNAG00000017679cnot3a7675.064ENSCJAG00000001094CNOT37588.852Callithrix_jacchus
ENSPNAG00000017679cnot3a7487.742ENSCAFG00000002699CNOT37588.852Canis_familiaris
ENSPNAG00000017679cnot3a7487.742ENSCAFG00020018359CNOT37588.852Canis_lupus_dingo
ENSPNAG00000017679cnot3a6285.761ENSCHIG00000015302CNOT37786.842Capra_hircus
ENSPNAG00000017679cnot3a7287.742ENSTSYG00000008058CNOT37688.852Carlito_syrichta
ENSPNAG00000017679cnot3a10060.101ENSCAPG00000009533CNOT37588.852Cavia_aperea
ENSPNAG00000017679cnot3a10059.698ENSCPOG00000020741CNOT38791.250Cavia_porcellus
ENSPNAG00000017679cnot3a7675.064ENSCCAG00000036290CNOT37988.852Cebus_capucinus
ENSPNAG00000017679cnot3a7174.621ENSCATG00000030324CNOT37588.852Cercocebus_atys
ENSPNAG00000017679cnot3a8174.555ENSCLAG00000003302CNOT310085.366Chinchilla_lanigera
ENSPNAG00000017679cnot3a8074.235ENSCSAG00000001900CNOT37588.852Chlorocebus_sabaeus
ENSPNAG00000017679cnot3a6988.636ENSCPBG00000011655CNOT38989.180Chrysemys_picta_bellii
ENSPNAG00000017679cnot3a7853.125ENSCING00000000293-7268.182Ciona_intestinalis
ENSPNAG00000017679cnot3a8073.980ENSCANG00000013408CNOT37588.852Colobus_angolensis_palliatus
ENSPNAG00000017679cnot3a7789.474ENSCGRG00001000855Cnot37589.180Cricetulus_griseus_chok1gshd
ENSPNAG00000017679cnot3a5962.551ENSCGRG00000012929Cnot37669.302Cricetulus_griseus_crigri
ENSPNAG00000017679cnot3a10072.564ENSCSEG00000003574cnot3a10072.021Cynoglossus_semilaevis
ENSPNAG00000017679cnot3a9889.167ENSCSEG00000016892cnot3b8182.117Cynoglossus_semilaevis
ENSPNAG00000017679cnot3a10072.932ENSCVAG00000008168cnot3a10072.168Cyprinodon_variegatus
ENSPNAG00000017679cnot3a10067.382ENSCVAG00000022122cnot3b8182.394Cyprinodon_variegatus
ENSPNAG00000017679cnot3a9494.017ENSDARG00000019842cnot3b7694.017Danio_rerio
ENSPNAG00000017679cnot3a9796.250ENSDARG00000007135cnot3a10082.770Danio_rerio
ENSPNAG00000017679cnot3a7287.419ENSDNOG00000045972CNOT37588.525Dasypus_novemcinctus
ENSPNAG00000017679cnot3a7287.742ENSDORG00000008021Cnot310080.460Dipodomys_ordii
ENSPNAG00000017679cnot3a5570.513FBgn0033029Not35067.066Drosophila_melanogaster
ENSPNAG00000017679cnot3a52100.000ENSETEG00000006305CNOT364100.000Echinops_telfairi
ENSPNAG00000017679cnot3a7073.052ENSEBUG00000010437cnot3a7170.455Eptatretus_burgeri
ENSPNAG00000017679cnot3a7287.742ENSECAG00000023181CNOT37588.852Equus_caballus
ENSPNAG00000017679cnot3a10066.494ENSELUG00000000953cnot3b5384.793Esox_lucius
ENSPNAG00000017679cnot3a10071.130ENSELUG00000014743cnot3a8393.333Esox_lucius
ENSPNAG00000017679cnot3a7587.742ENSFCAG00000014042CNOT37688.852Felis_catus
ENSPNAG00000017679cnot3a10072.894ENSFHEG00000023166cnot3a9797.009Fundulus_heteroclitus
ENSPNAG00000017679cnot3a10065.393ENSFHEG00000001696cnot3b5481.690Fundulus_heteroclitus
ENSPNAG00000017679cnot3a9469.336ENSGMOG00000005365cnot3a9868.841Gadus_morhua
ENSPNAG00000017679cnot3a10066.809ENSGAFG00000003459cnot3b8780.634Gambusia_affinis
ENSPNAG00000017679cnot3a6493.061ENSGAFG00000013094cnot3a10074.486Gambusia_affinis
ENSPNAG00000017679cnot3a6781.203ENSGACG00000009395cnot3b6985.714Gasterosteus_aculeatus
ENSPNAG00000017679cnot3a9470.139ENSGACG00000011489cnot3a9870.220Gasterosteus_aculeatus
ENSPNAG00000017679cnot3a9960.728ENSGAGG00000012677CNOT38886.239Gopherus_agassizii
ENSPNAG00000017679cnot3a7871.891ENSGGOG00000012996CNOT37988.852Gorilla_gorilla
ENSPNAG00000017679cnot3a9191.038ENSHBUG00000019699cnot3b7491.038Haplochromis_burtoni
ENSPNAG00000017679cnot3a10075.107ENSHBUG00000005275cnot3a10074.273Haplochromis_burtoni
ENSPNAG00000017679cnot3a6887.742ENSHGLG00000008821CNOT310080.460Heterocephalus_glaber_female
ENSPNAG00000017679cnot3a6383.846ENSHGLG00100006181CNOT310080.460Heterocephalus_glaber_male
ENSPNAG00000017679cnot3a9796.186ENSHCOG00000020968cnot3a8496.186Hippocampus_comes
ENSPNAG00000017679cnot3a9093.333ENSIPUG00000009046cnot3b10064.527Ictalurus_punctatus
ENSPNAG00000017679cnot3a10074.540ENSIPUG00000000167cnot310083.333Ictalurus_punctatus
ENSPNAG00000017679cnot3a6887.742ENSSTOG00000028248CNOT39588.852Ictidomys_tridecemlineatus
ENSPNAG00000017679cnot3a7189.474ENSJJAG00000014594Cnot310080.460Jaculus_jaculus
ENSPNAG00000017679cnot3a10071.792ENSKMAG00000004863cnot3a10073.476Kryptolebias_marmoratus
ENSPNAG00000017679cnot3a9293.333ENSKMAG00000018723cnot3b10068.817Kryptolebias_marmoratus
ENSPNAG00000017679cnot3a8091.667ENSLBEG00000018278cnot3b9964.667Labrus_bergylta
ENSPNAG00000017679cnot3a8591.429ENSLBEG00000017296cnot3a8993.119Labrus_bergylta
ENSPNAG00000017679cnot3a6887.097ENSLACG00000009742CNOT39888.197Latimeria_chalumnae
ENSPNAG00000017679cnot3a5492.771ENSLOCG00000000005cnot3b8692.771Lepisosteus_oculatus
ENSPNAG00000017679cnot3a7287.138ENSLAFG00000022133CNOT37588.235Loxodonta_africana
ENSPNAG00000017679cnot3a8374.490ENSMFAG00000040073CNOT39588.852Macaca_fascicularis
ENSPNAG00000017679cnot3a6092.017ENSMMUG00000009698CNOT310096.078Macaca_mulatta
ENSPNAG00000017679cnot3a7691.250ENSMLEG00000036579CNOT37188.852Mandrillus_leucophaeus
ENSPNAG00000017679cnot3a6395.000ENSMAMG00000019397cnot3a10073.950Mastacembelus_armatus
ENSPNAG00000017679cnot3a10067.230ENSMAMG00000019357cnot3b10065.186Mastacembelus_armatus
ENSPNAG00000017679cnot3a10067.653ENSMZEG00005002466cnot3b7084.859Maylandia_zebra
ENSPNAG00000017679cnot3a10075.000ENSMZEG00005016304cnot3a10074.166Maylandia_zebra
ENSPNAG00000017679cnot3a8574.809ENSMAUG00000014996Cnot37589.180Mesocricetus_auratus
ENSPNAG00000017679cnot3a6386.709ENSMICG00000002370CNOT37588.852Microcebus_murinus
ENSPNAG00000017679cnot3a7091.453ENSMMOG00000013086cnot3b9991.453Mola_mola
ENSPNAG00000017679cnot3a10072.443ENSMMOG00000016446cnot3a10073.434Mola_mola
ENSPNAG00000017679cnot3a5989.145ENSMODG00000004066CNOT37388.852Monodelphis_domestica
ENSPNAG00000017679cnot3a10075.699ENSMALG00000009204cnot3a10074.106Monopterus_albus
ENSPNAG00000017679cnot3a9965.887ENSMALG00000004936cnot3b9686.195Monopterus_albus
ENSPNAG00000017679cnot3a7674.235MGP_CAROLIEiJ_G0029095Cnot310098.000Mus_caroli
ENSPNAG00000017679cnot3a8274.235ENSMUSG00000035632Cnot310098.000Mus_musculus
ENSPNAG00000017679cnot3a7674.809MGP_PahariEiJ_G0020964Cnot310098.000Mus_pahari
ENSPNAG00000017679cnot3a8274.235MGP_SPRETEiJ_G0030148Cnot310098.000Mus_spretus
ENSPNAG00000017679cnot3a7287.742ENSMPUG00000010352CNOT37588.852Mustela_putorius_furo
ENSPNAG00000017679cnot3a6887.742ENSNGAG00000013266Cnot37588.852Nannospalax_galili
ENSPNAG00000017679cnot3a8386.577ENSNBRG00000003336cnot3b9890.265Neolamprologus_brichardi
ENSPNAG00000017679cnot3a6493.061ENSNBRG00000002401cnot3a10070.614Neolamprologus_brichardi
ENSPNAG00000017679cnot3a6387.742ENSNLEG00000006272CNOT37488.852Nomascus_leucogenys
ENSPNAG00000017679cnot3a88100.000ENSMEUG00000002952CNOT388100.000Notamacropus_eugenii
ENSPNAG00000017679cnot3a8274.300ENSODEG00000000705CNOT310088.608Octodon_degus
ENSPNAG00000017679cnot3a10074.759ENSONIG00000006568cnot3a10075.791Oreochromis_niloticus
ENSPNAG00000017679cnot3a10068.650ENSONIG00000007047cnot3b5484.722Oreochromis_niloticus
ENSPNAG00000017679cnot3a8272.886ENSOCUG00000007691CNOT37688.852Oryctolagus_cuniculus
ENSPNAG00000017679cnot3a10073.118ENSORLG00000011174cnot3a10073.599Oryzias_latipes
ENSPNAG00000017679cnot3a6393.333ENSORLG00000005982cnot3b7984.532Oryzias_latipes
ENSPNAG00000017679cnot3a5384.259ENSORLG00020005779cnot3b5484.532Oryzias_latipes_hni
ENSPNAG00000017679cnot3a10072.425ENSORLG00020008009cnot3a10073.441Oryzias_latipes_hni
ENSPNAG00000017679cnot3a10072.766ENSORLG00015013729cnot3a10073.247Oryzias_latipes_hsok
ENSPNAG00000017679cnot3a6393.333ENSORLG00015019021cnot3b5484.532Oryzias_latipes_hsok
ENSPNAG00000017679cnot3a8592.500ENSOMEG00000015557cnot3b7982.437Oryzias_melastigma
ENSPNAG00000017679cnot3a10074.596ENSOMEG00000010309cnot3a10075.484Oryzias_melastigma
ENSPNAG00000017679cnot3a7586.709ENSOGAG00000006945CNOT37588.852Otolemur_garnettii
ENSPNAG00000017679cnot3a6391.979ENSOARG00000002981CNOT36691.979Ovis_aries
ENSPNAG00000017679cnot3a7871.891ENSPPAG00000002748CNOT37988.852Pan_paniscus
ENSPNAG00000017679cnot3a7587.742ENSPPRG00000011705CNOT37688.852Panthera_pardus
ENSPNAG00000017679cnot3a8091.250ENSPTIG00000008781CNOT39689.262Panthera_tigris_altaica
ENSPNAG00000017679cnot3a7871.891ENSPTRG00000046717-7988.852Pan_troglodytes
ENSPNAG00000017679cnot3a7871.891ENSPTRG00000011444CNOT37988.852Pan_troglodytes
ENSPNAG00000017679cnot3a8493.750ENSPKIG00000015967-10090.438Paramormyrops_kingsleyae
ENSPNAG00000017679cnot3a9593.750ENSPKIG00000011733CNOT38384.892Paramormyrops_kingsleyae
ENSPNAG00000017679cnot3a8391.364ENSPMGG00000022539cnot3b7092.202Periophthalmus_magnuspinnatus
ENSPNAG00000017679cnot3a8075.064ENSPEMG00000024185Cnot37589.180Peromyscus_maniculatus_bairdii
ENSPNAG00000017679cnot3a7190.833ENSPCIG00000023018CNOT39483.784Phascolarctos_cinereus
ENSPNAG00000017679cnot3a7591.667ENSPFOG00000008693cnot3a9689.677Poecilia_formosa
ENSPNAG00000017679cnot3a10066.738ENSPFOG00000007168cnot3b5680.986Poecilia_formosa
ENSPNAG00000017679cnot3a10066.738ENSPLAG00000013457cnot3b7780.986Poecilia_latipinna
ENSPNAG00000017679cnot3a6394.583ENSPLAG00000013324cnot3a10074.378Poecilia_latipinna
ENSPNAG00000017679cnot3a6394.583ENSPMEG00000017718cnot3a10073.189Poecilia_mexicana
ENSPNAG00000017679cnot3a10066.952ENSPMEG00000010184cnot3b7880.986Poecilia_mexicana
ENSPNAG00000017679cnot3a9496.154ENSPREG00000007592cnot3a10092.800Poecilia_reticulata
ENSPNAG00000017679cnot3a9961.863ENSPREG00000000662cnot3b7878.970Poecilia_reticulata
ENSPNAG00000017679cnot3a7871.642ENSPPYG00000010372CNOT37588.525Pongo_abelii
ENSPNAG00000017679cnot3a5593.220ENSPCAG00000011999CNOT35693.220Procavia_capensis
ENSPNAG00000017679cnot3a6386.709ENSPCOG00000017673CNOT37788.852Propithecus_coquereli
ENSPNAG00000017679cnot3a8271.891ENSPVAG00000015564CNOT37088.525Pteropus_vampyrus
ENSPNAG00000017679cnot3a9493.277ENSPNYG00000003358cnot3b7983.688Pundamilia_nyererei
ENSPNAG00000017679cnot3a10075.214ENSPNYG00000002282cnot3a10074.381Pundamilia_nyererei
ENSPNAG00000017679cnot3a8474.873ENSRNOG00000053234Cnot37589.180Rattus_norvegicus
ENSPNAG00000017679cnot3a8374.490ENSRBIG00000031025CNOT37588.852Rhinopithecus_bieti
ENSPNAG00000017679cnot3a8374.745ENSRROG00000003872CNOT37688.852Rhinopithecus_roxellana
ENSPNAG00000017679cnot3a8470.396ENSSBOG00000030268CNOT37888.852Saimiri_boliviensis_boliviensis
ENSPNAG00000017679cnot3a10070.043ENSSFOG00015000248cnot38884.099Scleropages_formosus
ENSPNAG00000017679cnot3a10068.870ENSSFOG00015019203-10068.240Scleropages_formosus
ENSPNAG00000017679cnot3a6492.245ENSSMAG00000013235cnot3a10076.201Scophthalmus_maximus
ENSPNAG00000017679cnot3a10066.597ENSSMAG00000016031cnot3b5383.636Scophthalmus_maximus
ENSPNAG00000017679cnot3a10074.545ENSSDUG00000008181cnot3a9997.009Seriola_dumerili
ENSPNAG00000017679cnot3a10068.875ENSSDUG00000003428cnot3b10069.223Seriola_dumerili
ENSPNAG00000017679cnot3a9674.390ENSSLDG00000014733cnot3a9975.083Seriola_lalandi_dorsalis
ENSPNAG00000017679cnot3a10068.875ENSSLDG00000014376cnot3b10069.223Seriola_lalandi_dorsalis
ENSPNAG00000017679cnot3a8075.318ENSSPUG00000008510CNOT38988.852Sphenodon_punctatus
ENSPNAG00000017679cnot3a8495.299ENSSPAG00000001429cnot3b10068.922Stegastes_partitus
ENSPNAG00000017679cnot3a9793.151ENSSPAG00000003858cnot3a9092.578Stegastes_partitus
ENSPNAG00000017679cnot3a7287.742ENSSSCG00000003264CNOT37588.852Sus_scrofa
ENSPNAG00000017679cnot3a10074.348ENSTRUG00000015732cnot3a10074.106Takifugu_rubripes
ENSPNAG00000017679cnot3a9985.484ENSTRUG00000007248cnot3b6390.361Takifugu_rubripes
ENSPNAG00000017679cnot3a9463.832ENSTNIG00000005663cnot3b7481.690Tetraodon_nigroviridis
ENSPNAG00000017679cnot3a9471.412ENSTNIG00000008082cnot3a10071.659Tetraodon_nigroviridis
ENSPNAG00000017679cnot3a7288.065ENSUAMG00000005234CNOT37689.180Ursus_americanus
ENSPNAG00000017679cnot3a7192.437ENSUMAG00000010934CNOT38992.437Ursus_maritimus
ENSPNAG00000017679cnot3a7089.145ENSVVUG00000008239CNOT37488.852Vulpes_vulpes
ENSPNAG00000017679cnot3a7287.582ENSXETG00000003166cnot38988.026Xenopus_tropicalis
ENSPNAG00000017679cnot3a9496.581ENSXCOG00000019460cnot3a9789.498Xiphophorus_couchianus
ENSPNAG00000017679cnot3a9662.583ENSXCOG00000018976cnot3b5780.702Xiphophorus_couchianus
ENSPNAG00000017679cnot3a10065.919ENSXMAG00000014176cnot3b7580.986Xiphophorus_maculatus
ENSPNAG00000017679cnot3a10071.109ENSXMAG00000012273cnot3a10072.638Xiphophorus_maculatus

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