EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000017795 (Gene tree)
Gene ID: 108439575
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 52942 bases
Position: chrKV575602.1:39196-92137
Accession: 108439575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000012082	PIN_4	PF13638.6	2.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000036370	-	6626	XM_017718041	ENSPNAP00000012082	952 (aa)	XP_017573530	UPI0008145654

Gene Model

Click here to download ENSPNAG00000017795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017795	swt1	58	37.610	ENSG00000116668	SWT1	61	37.610	Homo_sapiens
ENSPNAG00000017795	swt1	57	47.826	ENSAPOG00000014897	-	58	48.264	Acanthochromis_polyacanthus
ENSPNAG00000017795	swt1	58	38.648	ENSAMEG00000013585	SWT1	62	38.648	Ailuropoda_melanoleuca
ENSPNAG00000017795	swt1	57	48.103	ENSAOCG00000013932	swt1	59	48.276	Amphiprion_ocellaris
ENSPNAG00000017795	swt1	57	48.448	ENSAPEG00000009613	-	59	48.621	Amphiprion_percula
ENSPNAG00000017795	swt1	57	49.913	ENSATEG00000018946	swt1	58	49.913	Anabas_testudineus
ENSPNAG00000017795	swt1	59	38.542	ENSAPLG00000008607	SWT1	77	38.889	Anas_platyrhynchos
ENSPNAG00000017795	swt1	59	37.478	ENSACAG00000002276	SWT1	65	37.478	Anolis_carolinensis
ENSPNAG00000017795	swt1	59	37.824	ENSANAG00000027068	SWT1	62	37.824	Aotus_nancymaae
ENSPNAG00000017795	swt1	56	46.570	ENSACLG00000009742	swt1	68	46.570	Astatotilapia_calliptera
ENSPNAG00000017795	swt1	100	61.578	ENSAMXG00000010971	swt1	98	61.771	Astyanax_mexicanus
ENSPNAG00000017795	swt1	59	38.276	ENSCJAG00000005544	SWT1	62	38.276	Callithrix_jacchus
ENSPNAG00000017795	swt1	61	37.793	ENSCAFG00000013543	SWT1	64	36.816	Canis_familiaris
ENSPNAG00000017795	swt1	61	37.793	ENSCAFG00020015648	SWT1	68	37.416	Canis_lupus_dingo
ENSPNAG00000017795	swt1	63	36.656	ENSCHIG00000023511	SWT1	97	37.329	Capra_hircus
ENSPNAG00000017795	swt1	59	37.024	ENSTSYG00000010470	SWT1	63	37.024	Carlito_syrichta
ENSPNAG00000017795	swt1	53	38.031	ENSCPOG00000014251	SWT1	63	38.031	Cavia_porcellus
ENSPNAG00000017795	swt1	59	38.382	ENSCCAG00000033926	SWT1	62	38.382	Cebus_capucinus
ENSPNAG00000017795	swt1	59	37.586	ENSCATG00000042210	SWT1	97	37.586	Cercocebus_atys
ENSPNAG00000017795	swt1	58	37.819	ENSCLAG00000013959	SWT1	63	38.850	Chinchilla_lanigera
ENSPNAG00000017795	swt1	58	37.050	ENSCSAG00000012895	SWT1	61	37.050	Chlorocebus_sabaeus
ENSPNAG00000017795	swt1	58	40.174	ENSCPBG00000015691	SWT1	62	40.174	Chrysemys_picta_bellii
ENSPNAG00000017795	swt1	59	36.949	ENSCANG00000032207	SWT1	97	37.370	Colobus_angolensis_palliatus
ENSPNAG00000017795	swt1	70	34.497	ENSCGRG00001022955	Swt1	74	35.336	Cricetulus_griseus_chok1gshd
ENSPNAG00000017795	swt1	70	34.497	ENSCGRG00000010224	Swt1	75	34.497	Cricetulus_griseus_crigri
ENSPNAG00000017795	swt1	59	46.812	ENSCSEG00000017352	swt1	90	43.000	Cynoglossus_semilaevis
ENSPNAG00000017795	swt1	86	51.418	ENSDARG00000094010	swt1	85	51.540	Danio_rerio
ENSPNAG00000017795	swt1	52	36.095	ENSDNOG00000005254	SWT1	60	36.095	Dasypus_novemcinctus
ENSPNAG00000017795	swt1	58	37.456	ENSDORG00000010531	Swt1	66	37.913	Dipodomys_ordii
ENSPNAG00000017795	swt1	59	37.331	ENSEASG00005005530	SWT1	66	37.331	Equus_asinus_asinus
ENSPNAG00000017795	swt1	59	36.054	ENSECAG00000012085	SWT1	66	36.054	Equus_caballus
ENSPNAG00000017795	swt1	83	45.423	ENSELUG00000020565	swt1	83	45.434	Esox_lucius
ENSPNAG00000017795	swt1	59	36.949	ENSFCAG00000011286	SWT1	63	36.949	Felis_catus
ENSPNAG00000017795	swt1	58	39.583	ENSFALG00000003206	SWT1	63	39.583	Ficedula_albicollis
ENSPNAG00000017795	swt1	59	37.931	ENSFDAG00000007569	SWT1	63	37.931	Fukomys_damarensis
ENSPNAG00000017795	swt1	58	37.500	ENSGALG00000034230	SWT1	65	38.225	Gallus_gallus
ENSPNAG00000017795	swt1	74	39.871	ENSGAFG00000007803	-	75	39.922	Gambusia_affinis
ENSPNAG00000017795	swt1	58	39.192	ENSGAGG00000025050	SWT1	96	39.192	Gopherus_agassizii
ENSPNAG00000017795	swt1	52	37.622	ENSGGOG00000041167	-	91	37.622	Gorilla_gorilla
ENSPNAG00000017795	swt1	58	46.967	ENSHBUG00000006188	swt1	68	46.886	Haplochromis_burtoni
ENSPNAG00000017795	swt1	57	38.475	ENSHGLG00000006542	SWT1	65	38.475	Heterocephalus_glaber_female
ENSPNAG00000017795	swt1	57	38.475	ENSHGLG00100014408	SWT1	63	38.475	Heterocephalus_glaber_male
ENSPNAG00000017795	swt1	95	55.725	ENSIPUG00000009113	-	93	55.854	Ictalurus_punctatus
ENSPNAG00000017795	swt1	58	37.653	ENSSTOG00000010356	SWT1	62	37.653	Ictidomys_tridecemlineatus
ENSPNAG00000017795	swt1	58	36.427	ENSJJAG00000015927	Swt1	65	36.427	Jaculus_jaculus
ENSPNAG00000017795	swt1	70	42.736	ENSKMAG00000012533	swt1	69	42.736	Kryptolebias_marmoratus
ENSPNAG00000017795	swt1	59	42.275	ENSLACG00000009194	SWT1	82	42.275	Latimeria_chalumnae
ENSPNAG00000017795	swt1	55	49.067	ENSLOCG00000001749	swt1	98	49.067	Lepisosteus_oculatus
ENSPNAG00000017795	swt1	58	37.326	ENSLAFG00000004346	-	95	37.173	Loxodonta_africana
ENSPNAG00000017795	swt1	59	37.241	ENSMFAG00000031793	SWT1	97	37.241	Macaca_fascicularis
ENSPNAG00000017795	swt1	59	36.833	ENSMMUG00000013882	SWT1	97	36.489	Macaca_mulatta
ENSPNAG00000017795	swt1	59	37.241	ENSMNEG00000035502	SWT1	97	37.241	Macaca_nemestrina
ENSPNAG00000017795	swt1	59	37.370	ENSMLEG00000038692	SWT1	97	37.241	Mandrillus_leucophaeus
ENSPNAG00000017795	swt1	58	46.967	ENSMZEG00005018489	swt1	68	46.886	Maylandia_zebra
ENSPNAG00000017795	swt1	58	38.250	ENSMGAG00000000973	SWT1	97	38.250	Meleagris_gallopavo
ENSPNAG00000017795	swt1	70	33.480	ENSMAUG00000007996	Swt1	72	33.480	Mesocricetus_auratus
ENSPNAG00000017795	swt1	58	39.373	ENSMICG00000014975	SWT1	62	39.373	Microcebus_murinus
ENSPNAG00000017795	swt1	59	38.671	ENSMOCG00000009776	Swt1	74	36.131	Microtus_ochrogaster
ENSPNAG00000017795	swt1	58	38.128	ENSMODG00000007472	SWT1	61	38.128	Monodelphis_domestica
ENSPNAG00000017795	swt1	58	50.626	ENSMALG00000019308	swt1	58	50.626	Monopterus_albus
ENSPNAG00000017795	swt1	58	38.743	MGP_CAROLIEiJ_G0014692	Swt1	66	48.485	Mus_caroli
ENSPNAG00000017795	swt1	58	38.394	ENSMUSG00000052748	Swt1	66	49.091	Mus_musculus
ENSPNAG00000017795	swt1	70	35.302	MGP_PahariEiJ_G0027928	Swt1	68	47.368	Mus_pahari
ENSPNAG00000017795	swt1	58	38.045	MGP_SPRETEiJ_G0015499	Swt1	66	47.879	Mus_spretus
ENSPNAG00000017795	swt1	61	37.752	ENSMPUG00000011913	SWT1	65	37.752	Mustela_putorius_furo
ENSPNAG00000017795	swt1	61	37.458	ENSMLUG00000001142	SWT1	63	37.458	Myotis_lucifugus
ENSPNAG00000017795	swt1	58	37.937	ENSNGAG00000021080	Swt1	74	34.582	Nannospalax_galili
ENSPNAG00000017795	swt1	59	38.128	ENSNLEG00000018031	SWT1	62	38.128	Nomascus_leucogenys
ENSPNAG00000017795	swt1	57	47.466	ENSONIG00000009994	swt1	97	47.955	Oreochromis_niloticus
ENSPNAG00000017795	swt1	58	35.751	ENSOANG00000001013	-	72	35.751	Ornithorhynchus_anatinus
ENSPNAG00000017795	swt1	60	39.322	ENSOCUG00000004901	SWT1	64	39.322	Oryctolagus_cuniculus
ENSPNAG00000017795	swt1	57	47.735	ENSORLG00000009682	swt1	59	47.735	Oryzias_latipes
ENSPNAG00000017795	swt1	57	48.330	ENSORLG00020011654	swt1	59	48.330	Oryzias_latipes_hni
ENSPNAG00000017795	swt1	57	47.387	ENSORLG00015007734	swt1	59	47.387	Oryzias_latipes_hsok
ENSPNAG00000017795	swt1	69	44.807	ENSOMEG00000006607	swt1	67	44.807	Oryzias_melastigma
ENSPNAG00000017795	swt1	58	39.229	ENSOGAG00000016195	SWT1	62	38.421	Otolemur_garnettii
ENSPNAG00000017795	swt1	59	37.716	ENSOARG00000004156	SWT1	62	37.716	Ovis_aries
ENSPNAG00000017795	swt1	59	37.543	ENSPPAG00000021400	SWT1	62	37.543	Pan_paniscus
ENSPNAG00000017795	swt1	59	37.024	ENSPPRG00000023754	SWT1	63	37.024	Panthera_pardus
ENSPNAG00000017795	swt1	59	37.024	ENSPTIG00000021889	SWT1	63	37.024	Panthera_tigris_altaica
ENSPNAG00000017795	swt1	59	37.543	ENSPTRG00000001777	SWT1	62	37.543	Pan_troglodytes
ENSPNAG00000017795	swt1	59	36.824	ENSPANG00000005099	SWT1	97	37.349	Papio_anubis
ENSPNAG00000017795	swt1	58	52.065	ENSPKIG00000005979	swt1	58	52.065	Paramormyrops_kingsleyae
ENSPNAG00000017795	swt1	58	40.522	ENSPSIG00000008961	SWT1	61	40.522	Pelodiscus_sinensis
ENSPNAG00000017795	swt1	59	38.276	ENSPEMG00000008208	Swt1	62	38.276	Peromyscus_maniculatus_bairdii
ENSPNAG00000017795	swt1	61	35.726	ENSPCIG00000002443	SWT1	75	34.903	Phascolarctos_cinereus
ENSPNAG00000017795	swt1	56	47.049	ENSPFOG00000010988	-	69	45.183	Poecilia_formosa
ENSPNAG00000017795	swt1	56	47.222	ENSPLAG00000022908	-	58	47.222	Poecilia_latipinna
ENSPNAG00000017795	swt1	56	47.049	ENSPMEG00000006943	-	69	42.734	Poecilia_mexicana
ENSPNAG00000017795	swt1	59	37.716	ENSPPYG00000000415	SWT1	62	37.716	Pongo_abelii
ENSPNAG00000017795	swt1	59	35.517	ENSPVAG00000005968	SWT1	63	35.690	Pteropus_vampyrus
ENSPNAG00000017795	swt1	58	46.967	ENSPNYG00000012934	swt1	68	46.886	Pundamilia_nyererei
ENSPNAG00000017795	swt1	59	38.225	ENSRNOG00000032258	Swt1	74	35.915	Rattus_norvegicus
ENSPNAG00000017795	swt1	59	36.163	ENSRBIG00000040630	SWT1	96	36.163	Rhinopithecus_bieti
ENSPNAG00000017795	swt1	59	38.210	ENSSBOG00000028825	SWT1	63	37.587	Saimiri_boliviensis_boliviensis
ENSPNAG00000017795	swt1	61	37.013	ENSSHAG00000009241	SWT1	74	35.530	Sarcophilus_harrisii
ENSPNAG00000017795	swt1	58	56.766	ENSSFOG00015004895	swt1	57	56.766	Scleropages_formosus
ENSPNAG00000017795	swt1	57	48.330	ENSSMAG00000020761	-	64	38.417	Scophthalmus_maximus
ENSPNAG00000017795	swt1	98	38.191	ENSSDUG00000012345	swt1	68	45.559	Seriola_dumerili
ENSPNAG00000017795	swt1	98	37.879	ENSSLDG00000003821	swt1	78	42.694	Seriola_lalandi_dorsalis
ENSPNAG00000017795	swt1	59	38.814	ENSSPUG00000003899	SWT1	63	38.814	Sphenodon_punctatus
ENSPNAG00000017795	swt1	68	44.589	ENSSPAG00000001030	swt1	77	42.058	Stegastes_partitus
ENSPNAG00000017795	swt1	58	37.435	ENSSSCG00000015569	SWT1	63	37.435	Sus_scrofa
ENSPNAG00000017795	swt1	58	39.539	ENSTGUG00000003718	-	99	39.539	Taeniopygia_guttata
ENSPNAG00000017795	swt1	98	36.936	ENSTRUG00000006420	swt1	61	48.294	Takifugu_rubripes
ENSPNAG00000017795	swt1	59	36.224	ENSTTRG00000005914	SWT1	63	36.224	Tursiops_truncatus
ENSPNAG00000017795	swt1	61	38.308	ENSUAMG00000020937	SWT1	70	38.308	Ursus_americanus
ENSPNAG00000017795	swt1	61	38.308	ENSUMAG00000021918	SWT1	65	38.308	Ursus_maritimus
ENSPNAG00000017795	swt1	51	37.805	ENSVPAG00000011855	SWT1	55	37.805	Vicugna_pacos
ENSPNAG00000017795	swt1	58	38.287	ENSVVUG00000009182	SWT1	64	37.262	Vulpes_vulpes
ENSPNAG00000017795	swt1	69	43.290	ENSXMAG00000023472	-	69	43.353	Xiphophorus_maculatus