EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000017856 (Gene tree)
Gene ID: 108435193
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2642 bases
Position: chrKV575461.1:1000540-1003181
Accession: 108435193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000012127	MMR_HSR1	PF01926.23	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000019311	-	1883	XM_017710842	ENSPNAP00000012127	229 (aa)	XP_017566331	UPI0008145200

Gene Model

Click here to download ENSPNAG00000017856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000017856	zgc:101559	71	42.073	ENSPNAG00000004189	rab13	84	42.073
ENSPNAG00000017856	zgc:101559	71	40.719	ENSPNAG00000020583	zgc:100918	80	40.719
ENSPNAG00000017856	zgc:101559	64	42.177	ENSPNAG00000011215	rab15	68	42.177
ENSPNAG00000017856	zgc:101559	85	37.688	ENSPNAG00000014363	-	90	37.688
ENSPNAG00000017856	zgc:101559	86	31.019	ENSPNAG00000001348	rasl11b	81	31.019
ENSPNAG00000017856	zgc:101559	85	39.806	ENSPNAG00000013589	rab39bb	96	39.806
ENSPNAG00000017856	zgc:101559	74	45.294	ENSPNAG00000013004	rab1ba	82	45.294
ENSPNAG00000017856	zgc:101559	82	38.071	ENSPNAG00000020475	rab11ba	89	38.071
ENSPNAG00000017856	zgc:101559	86	34.634	ENSPNAG00000029085	rab11al	94	34.634
ENSPNAG00000017856	zgc:101559	78	35.754	ENSPNAG00000014085	hrasa	92	35.754
ENSPNAG00000017856	zgc:101559	71	39.521	ENSPNAG00000016600	-	79	39.521
ENSPNAG00000017856	zgc:101559	74	45.882	ENSPNAG00000013863	rab1ab	75	45.882
ENSPNAG00000017856	zgc:101559	67	37.580	ENSPNAG00000007277	RAB9A	74	37.580
ENSPNAG00000017856	zgc:101559	71	35.758	ENSPNAG00000024254	rabl2	72	35.758
ENSPNAG00000017856	zgc:101559	73	33.149	ENSPNAG00000007710	rasl11a	69	33.149
ENSPNAG00000017856	zgc:101559	79	38.378	ENSPNAG00000015031	rab12	75	38.624
ENSPNAG00000017856	zgc:101559	74	40.351	ENSPNAG00000002218	-	82	39.665
ENSPNAG00000017856	zgc:101559	64	41.216	ENSPNAG00000015810	RAB15	71	41.216
ENSPNAG00000017856	zgc:101559	84	54.545	ENSPNAG00000014146	-	92	54.545
ENSPNAG00000017856	zgc:101559	86	35.922	ENSPNAG00000006569	rab25b	94	35.922
ENSPNAG00000017856	zgc:101559	78	39.665	ENSPNAG00000023223	rab5aa	81	39.665
ENSPNAG00000017856	zgc:101559	66	33.553	ENSPNAG00000004728	rheb	82	33.553
ENSPNAG00000017856	zgc:101559	86	34.158	ENSPNAG00000010157	rab6bb	95	34.158
ENSPNAG00000017856	zgc:101559	65	41.611	ENSPNAG00000021737	rab41	70	41.611
ENSPNAG00000017856	zgc:101559	92	33.953	ENSPNAG00000028379	rab6ba	99	33.953
ENSPNAG00000017856	zgc:101559	70	40.994	ENSPNAG00000000694	rab25a	75	40.994
ENSPNAG00000017856	zgc:101559	72	41.566	ENSPNAG00000021675	-	75	41.566
ENSPNAG00000017856	zgc:101559	78	32.461	ENSPNAG00000013747	mras	90	33.508
ENSPNAG00000017856	zgc:101559	72	34.731	ENSPNAG00000024728	rab23	71	35.196
ENSPNAG00000017856	zgc:101559	80	65.104	ENSPNAG00000029115	rab33ba	92	62.802
ENSPNAG00000017856	zgc:101559	67	43.506	ENSPNAG00000011193	rab2a	72	43.506
ENSPNAG00000017856	zgc:101559	66	46.753	ENSPNAG00000013897	rab39ba	72	46.753
ENSPNAG00000017856	zgc:101559	77	66.667	ENSPNAG00000022929	rab33a	60	65.217
ENSPNAG00000017856	zgc:101559	72	47.305	ENSPNAG00000010760	rab30	81	47.305
ENSPNAG00000017856	zgc:101559	65	41.611	ENSPNAG00000005519	-	71	40.940
ENSPNAG00000017856	zgc:101559	74	43.529	ENSPNAG00000029574	zgc:171927	79	43.529
ENSPNAG00000017856	zgc:101559	67	38.854	ENSPNAG00000017938	RAB9A	71	38.854
ENSPNAG00000017856	zgc:101559	76	34.682	ENSPNAG00000028629	kras	90	34.286
ENSPNAG00000017856	zgc:101559	77	35.795	ENSPNAG00000000584	hrasb	90	35.795
ENSPNAG00000017856	zgc:101559	75	33.526	ENSPNAG00000026295	si:ch73-116o1.2	81	33.526
ENSPNAG00000017856	zgc:101559	88	37.559	ENSPNAG00000016567	rab42a	99	37.559
ENSPNAG00000017856	zgc:101559	86	37.681	ENSPNAG00000006431	-	94	37.681
ENSPNAG00000017856	zgc:101559	86	41.117	ENSPNAG00000014046	-	97	41.117
ENSPNAG00000017856	zgc:101559	85	36.946	ENSPNAG00000014863	rab11a	93	36.946
ENSPNAG00000017856	zgc:101559	78	39.106	ENSPNAG00000009496	rab5ab	81	39.106
ENSPNAG00000017856	zgc:101559	78	39.665	ENSPNAG00000028138	rab5c	79	39.665
ENSPNAG00000017856	zgc:101559	64	43.151	ENSPNAG00000002404	rab18b	71	43.151
ENSPNAG00000017856	zgc:101559	73	45.833	ENSPNAG00000012540	-	81	45.833
ENSPNAG00000017856	zgc:101559	83	32.487	ENSPNAG00000025619	dnajc27	70	32.487
ENSPNAG00000017856	zgc:101559	63	33.784	ENSPNAG00000028497	si:cabz01085950.1	70	33.784
ENSPNAG00000017856	zgc:101559	69	30.625	ENSPNAG00000018361	rras	81	30.625
ENSPNAG00000017856	zgc:101559	79	46.961	ENSPNAG00000018986	si:dkey-16l2.16	81	46.961
ENSPNAG00000017856	zgc:101559	66	40.000	ENSPNAG00000015040	rab34b	65	40.000
ENSPNAG00000017856	zgc:101559	68	37.037	ENSPNAG00000017466	rab38b	77	37.037
ENSPNAG00000017856	zgc:101559	85	36.585	ENSPNAG00000011548	rab18a	96	36.585
ENSPNAG00000017856	zgc:101559	65	42.282	ENSPNAG00000003227	rab3c	91	36.139
ENSPNAG00000017856	zgc:101559	73	39.881	ENSPNAG00000015161	rab22a	83	39.881
ENSPNAG00000017856	zgc:101559	71	39.521	ENSPNAG00000015164	-	79	39.521
ENSPNAG00000017856	zgc:101559	67	39.490	ENSPNAG00000018132	rab9b	70	39.490

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017856	zgc:101559	100	73.222	ENSAPOG00000007503	zgc:101559	100	73.222	Acanthochromis_polyacanthus
ENSPNAG00000017856	zgc:101559	87	81.863	ENSACIG00000021459	zgc:101559	89	81.863	Amphilophus_citrinellus
ENSPNAG00000017856	zgc:101559	100	74.894	ENSAOCG00000024675	zgc:101559	100	74.894	Amphiprion_ocellaris
ENSPNAG00000017856	zgc:101559	100	74.894	ENSAPEG00000005176	zgc:101559	100	74.894	Amphiprion_percula
ENSPNAG00000017856	zgc:101559	100	73.504	ENSATEG00000007761	zgc:101559	100	73.504	Anabas_testudineus
ENSPNAG00000017856	zgc:101559	100	76.068	ENSACLG00000027006	zgc:101559	99	76.068	Astatotilapia_calliptera
ENSPNAG00000017856	zgc:101559	100	91.703	ENSAMXG00000040460	zgc:101559	94	91.703	Astyanax_mexicanus
ENSPNAG00000017856	zgc:101559	88	79.024	ENSCSEG00000006243	zgc:101559	88	79.024	Cynoglossus_semilaevis
ENSPNAG00000017856	zgc:101559	100	73.276	ENSCVAG00000019227	zgc:101559	99	73.276	Cyprinodon_variegatus
ENSPNAG00000017856	zgc:101559	100	81.974	ENSDARG00000003257	zgc:101559	100	81.974	Danio_rerio
ENSPNAG00000017856	zgc:101559	100	72.103	ENSFHEG00000011483	zgc:101559	99	72.103	Fundulus_heteroclitus
ENSPNAG00000017856	zgc:101559	92	81.132	ENSGMOG00000011665	zgc:101559	100	81.132	Gadus_morhua
ENSPNAG00000017856	zgc:101559	100	73.391	ENSGAFG00000021202	zgc:101559	99	73.391	Gambusia_affinis
ENSPNAG00000017856	zgc:101559	92	75.587	ENSGACG00000001725	zgc:101559	91	75.587	Gasterosteus_aculeatus
ENSPNAG00000017856	zgc:101559	100	75.536	ENSHBUG00000007827	zgc:101559	99	75.536	Haplochromis_burtoni
ENSPNAG00000017856	zgc:101559	100	69.658	ENSHCOG00000009133	zgc:101559	99	69.658	Hippocampus_comes
ENSPNAG00000017856	zgc:101559	100	84.783	ENSIPUG00000022394	zgc:101559	100	84.783	Ictalurus_punctatus
ENSPNAG00000017856	zgc:101559	88	80.296	ENSKMAG00000002862	zgc:101559	86	80.296	Kryptolebias_marmoratus
ENSPNAG00000017856	zgc:101559	100	76.068	ENSLBEG00000025798	zgc:101559	100	76.068	Labrus_bergylta
ENSPNAG00000017856	zgc:101559	86	70.149	ENSLACG00000011557	zgc:101559	87	70.149	Latimeria_chalumnae
ENSPNAG00000017856	zgc:101559	100	74.569	ENSLOCG00000005904	zgc:101559	99	74.569	Lepisosteus_oculatus
ENSPNAG00000017856	zgc:101559	100	74.786	ENSMAMG00000017431	zgc:101559	100	74.786	Mastacembelus_armatus
ENSPNAG00000017856	zgc:101559	100	75.536	ENSMZEG00005021778	zgc:101559	99	75.536	Maylandia_zebra
ENSPNAG00000017856	zgc:101559	100	71.552	ENSMMOG00000019779	zgc:101559	99	71.552	Mola_mola
ENSPNAG00000017856	zgc:101559	100	71.795	ENSMALG00000003712	zgc:101559	100	71.795	Monopterus_albus
ENSPNAG00000017856	zgc:101559	100	75.536	ENSNBRG00000002684	zgc:101559	99	75.536	Neolamprologus_brichardi
ENSPNAG00000017856	zgc:101559	100	75.536	ENSONIG00000006715	-	99	75.536	Oreochromis_niloticus
ENSPNAG00000017856	zgc:101559	100	72.650	ENSORLG00000030642	zgc:101559	100	72.650	Oryzias_latipes
ENSPNAG00000017856	zgc:101559	100	73.077	ENSORLG00020012685	zgc:101559	100	73.077	Oryzias_latipes_hni
ENSPNAG00000017856	zgc:101559	100	72.222	ENSORLG00015016047	zgc:101559	100	72.222	Oryzias_latipes_hsok
ENSPNAG00000017856	zgc:101559	100	73.391	ENSOMEG00000013128	zgc:101559	100	73.391	Oryzias_melastigma
ENSPNAG00000017856	zgc:101559	100	71.795	ENSPKIG00000013397	zgc:101559	99	71.795	Paramormyrops_kingsleyae
ENSPNAG00000017856	zgc:101559	100	74.138	ENSPFOG00000009101	-	99	74.138	Poecilia_formosa
ENSPNAG00000017856	zgc:101559	100	74.138	ENSPLAG00000020627	zgc:101559	99	74.138	Poecilia_latipinna
ENSPNAG00000017856	zgc:101559	100	74.569	ENSPMEG00000010152	zgc:101559	99	74.569	Poecilia_mexicana
ENSPNAG00000017856	zgc:101559	100	73.276	ENSPREG00000007017	zgc:101559	99	73.276	Poecilia_reticulata
ENSPNAG00000017856	zgc:101559	100	75.536	ENSPNYG00000012922	zgc:101559	99	75.536	Pundamilia_nyererei
ENSPNAG00000017856	zgc:101559	97	74.222	ENSSFOG00015006175	zgc:101559	97	74.222	Scleropages_formosus
ENSPNAG00000017856	zgc:101559	100	69.492	ENSSMAG00000002229	zgc:101559	100	69.492	Scophthalmus_maximus
ENSPNAG00000017856	zgc:101559	100	75.319	ENSSDUG00000008151	zgc:101559	100	75.319	Seriola_dumerili
ENSPNAG00000017856	zgc:101559	100	74.894	ENSSLDG00000019214	zgc:101559	100	74.894	Seriola_lalandi_dorsalis
ENSPNAG00000017856	zgc:101559	100	75.536	ENSSPAG00000006404	zgc:101559	99	75.536	Stegastes_partitus
ENSPNAG00000017856	zgc:101559	100	72.340	ENSTRUG00000009903	zgc:101559	100	72.340	Takifugu_rubripes
ENSPNAG00000017856	zgc:101559	91	75.238	ENSTNIG00000015000	zgc:101559	89	75.238	Tetraodon_nigroviridis
ENSPNAG00000017856	zgc:101559	100	73.391	ENSXCOG00000018683	zgc:101559	99	73.391	Xiphophorus_couchianus
ENSPNAG00000017856	zgc:101559	100	74.249	ENSXMAG00000011171	zgc:101559	99	74.249	Xiphophorus_maculatus