EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000017907 (Gene tree)
Gene ID
108431797
Gene Symbol
patl1
Alias
fa11d04|wu:fa11d04|zgc:158239
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Minus strand
Length
15401 bases
Position
chrKV575393.1:2399375-2414775
Accession
108431797
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000012183PAT1PF09770.94e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000036412-3168XM_017705168ENSPNAP00000012183772 (aa)XP_017560657UPI00081480F4
Gene Model
Click here to download ENSPNAG00000017907's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017907's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000017907patl15337.736ENSPNAG00000002315patl25737.129
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000017907patl15436.712ENSG00000229474PATL29939.011Homo_sapiens
ENSPNAG00000017907patl18462.295ENSG00000166889PATL18449.617Homo_sapiens
ENSPNAG00000017907patl19487.940ENSAPOG00000021290patl19975.575Acanthochromis_polyacanthus
ENSPNAG00000017907patl15336.682ENSAPOG00000022988patl25836.432Acanthochromis_polyacanthus
ENSPNAG00000017907patl18462.295ENSAMEG00000014215PATL18449.311Ailuropoda_melanoleuca
ENSPNAG00000017907patl15636.261ENSAMEG00000014997PATL27637.129Ailuropoda_melanoleuca
ENSPNAG00000017907patl19976.184ENSACIG00000005182patl19974.872Amphilophus_citrinellus
ENSPNAG00000017907patl19478.202ENSAOCG00000021993patl19578.367Amphiprion_ocellaris
ENSPNAG00000017907patl15634.764ENSAOCG00000023738patl25135.516Amphiprion_ocellaris
ENSPNAG00000017907patl15634.549ENSAPEG00000011299patl26135.264Amphiprion_percula
ENSPNAG00000017907patl15188.693ENSAPEG00000021391patl110075.359Amphiprion_percula
ENSPNAG00000017907patl16033.264ENSATEG00000019567patl26034.586Anabas_testudineus
ENSPNAG00000017907patl110074.607ENSATEG00000002230patl110074.756Anabas_testudineus
ENSPNAG00000017907patl15139.066ENSAPLG00000003980PATL26438.903Anas_platyrhynchos
ENSPNAG00000017907patl15249.661ENSAPLG00000013394PATL15458.491Anas_platyrhynchos
ENSPNAG00000017907patl19945.115ENSACAG00000006607PATL19943.952Anolis_carolinensis
ENSPNAG00000017907patl18462.295ENSANAG00000023078PATL18449.617Aotus_nancymaae
ENSPNAG00000017907patl110074.217ENSACLG00000005144patl110074.519Astatotilapia_calliptera
ENSPNAG00000017907patl110089.332ENSAMXG00000010731patl110090.746Astyanax_mexicanus
ENSPNAG00000017907patl15437.723ENSAMXG00000020293patl25738.308Astyanax_mexicanus
ENSPNAG00000017907patl19946.098ENSBTAG00000005913PATL19945.728Bos_taurus
ENSPNAG00000017907patl18462.295ENSCJAG00000016192PATL18449.617Callithrix_jacchus
ENSPNAG00000017907patl15236.449ENSCJAG00000002379PATL27237.531Callithrix_jacchus
ENSPNAG00000017907patl15237.956ENSCAFG00000013629PATL27338.177Canis_familiaris
ENSPNAG00000017907patl18462.295ENSCAFG00000007581PATL18449.617Canis_familiaris
ENSPNAG00000017907patl18364.151ENSCAFG00020001648PATL18449.693Canis_lupus_dingo
ENSPNAG00000017907patl15237.956ENSCAFG00020022169PATL27338.177Canis_lupus_dingo
ENSPNAG00000017907patl15636.784ENSCHIG00000026665PATL27437.965Capra_hircus
ENSPNAG00000017907patl19945.969ENSCHIG00000025913PATL19945.006Capra_hircus
ENSPNAG00000017907patl110046.347ENSTSYG00000012748PATL19645.389Carlito_syrichta
ENSPNAG00000017907patl15436.902ENSTSYG00000032456PATL27237.688Carlito_syrichta
ENSPNAG00000017907patl19946.172ENSCAPG00000013668PATL19944.498Cavia_aperea
ENSPNAG00000017907patl19944.731ENSCPOG00000006827PATL19943.677Cavia_porcellus
ENSPNAG00000017907patl18462.295ENSCCAG00000023759PATL18449.617Cebus_capucinus
ENSPNAG00000017907patl18462.295ENSCATG00000009629PATL18449.617Cercocebus_atys
ENSPNAG00000017907patl19846.973ENSCLAG00000003427PATL19645.217Chinchilla_lanigera
ENSPNAG00000017907patl17750.536ENSCSAG00000006095PATL19349.163Chlorocebus_sabaeus
ENSPNAG00000017907patl16460.000ENSCHOG00000001611PATL18360.000Choloepus_hoffmanni
ENSPNAG00000017907patl15239.423ENSCPBG00000006150PATL26039.259Chrysemys_picta_bellii
ENSPNAG00000017907patl18130.133ENSCING00000021535-9830.149Ciona_intestinalis
ENSPNAG00000017907patl15436.735ENSCANG00000013856PATL27338.025Colobus_angolensis_palliatus
ENSPNAG00000017907patl18461.667ENSCANG00000039197PATL19442.951Colobus_angolensis_palliatus
ENSPNAG00000017907patl15136.038ENSCGRG00001010801Patl27337.037Cricetulus_griseus_chok1gshd
ENSPNAG00000017907patl19946.867ENSCGRG00001024927Patl19945.542Cricetulus_griseus_chok1gshd
ENSPNAG00000017907patl19946.867ENSCGRG00000000461Patl19945.542Cricetulus_griseus_crigri
ENSPNAG00000017907patl15136.038ENSCGRG00000013007Patl27337.037Cricetulus_griseus_crigri
ENSPNAG00000017907patl15334.353ENSCSEG00000009438patl25734.257Cynoglossus_semilaevis
ENSPNAG00000017907patl110071.599ENSCSEG00000008261patl110071.871Cynoglossus_semilaevis
ENSPNAG00000017907patl19380.253ENSCVAG00000006664patl110064.439Cyprinodon_variegatus
ENSPNAG00000017907patl15633.556ENSCVAG00000016203patl26034.091Cyprinodon_variegatus
ENSPNAG00000017907patl15039.348ENSDARG00000089567patl25538.847Danio_rerio
ENSPNAG00000017907patl110079.871ENSDARG00000017423patl110079.871Danio_rerio
ENSPNAG00000017907patl15436.941ENSDNOG00000036837PATL26837.838Dasypus_novemcinctus
ENSPNAG00000017907patl17362.264ENSDNOG00000038865PATL19947.628Dasypus_novemcinctus
ENSPNAG00000017907patl19944.898ENSDORG00000000237Patl19943.818Dipodomys_ordii
ENSPNAG00000017907patl19945.269ENSEASG00005007963PATL19945.192Equus_asinus_asinus
ENSPNAG00000017907patl19945.324ENSECAG00000011411PATL19945.312Equus_caballus
ENSPNAG00000017907patl110076.280ENSELUG00000024249patl110076.904Esox_lucius
ENSPNAG00000017907patl16235.211ENSELUG00000023244patl25437.000Esox_lucius
ENSPNAG00000017907patl15237.530ENSFCAG00000027170PATL27437.931Felis_catus
ENSPNAG00000017907patl18462.295ENSFCAG00000015573PATL19944.511Felis_catus
ENSPNAG00000017907patl19846.506ENSFALG00000012150PATL19645.590Ficedula_albicollis
ENSPNAG00000017907patl15037.121ENSFALG00000009768PATL25537.028Ficedula_albicollis
ENSPNAG00000017907patl19845.742ENSFDAG00000016128PATL19644.694Fukomys_damarensis
ENSPNAG00000017907patl19972.963ENSFHEG00000017790patl110074.074Fundulus_heteroclitus
ENSPNAG00000017907patl15335.698ENSGMOG00000005666patl210035.294Gadus_morhua
ENSPNAG00000017907patl15138.060ENSGALG00000002167PATL25038.060Gallus_gallus
ENSPNAG00000017907patl19946.796ENSGALG00000042641PATL110044.828Gallus_gallus
ENSPNAG00000017907patl15335.765ENSGAFG00000019344patl25536.272Gambusia_affinis
ENSPNAG00000017907patl110075.465ENSGAFG00000006508patl110074.844Gambusia_affinis
ENSPNAG00000017907patl19970.237ENSGACG00000016448patl19970.486Gasterosteus_aculeatus
ENSPNAG00000017907patl19946.454ENSGAGG00000004461PATL19944.946Gopherus_agassizii
ENSPNAG00000017907patl15436.712ENSGGOG00000025923PATL27338.235Gorilla_gorilla
ENSPNAG00000017907patl18462.295ENSGGOG00000004335PATL110042.527Gorilla_gorilla
ENSPNAG00000017907patl110074.096ENSHBUG00000005365patl110074.639Haplochromis_burtoni
ENSPNAG00000017907patl15335.377ENSHBUG00000005929patl26035.013Haplochromis_burtoni
ENSPNAG00000017907patl17750.536ENSHGLG00000018173PATL19944.111Heterocephalus_glaber_female
ENSPNAG00000017907patl18265.116ENSHGLG00100003453PATL18886.364Heterocephalus_glaber_male
ENSPNAG00000017907patl15335.529ENSHCOG00000016754patl25435.516Hippocampus_comes
ENSPNAG00000017907patl110070.384ENSHCOG00000001898patl110069.602Hippocampus_comes
ENSPNAG00000017907patl15336.782ENSIPUG00000020692patl25636.816Ictalurus_punctatus
ENSPNAG00000017907patl15437.813ENSSTOG00000033848PATL27238.404Ictidomys_tridecemlineatus
ENSPNAG00000017907patl18460.714ENSSTOG00000013764PATL18978.125Ictidomys_tridecemlineatus
ENSPNAG00000017907patl18066.038ENSJJAG00000010135Patl18250.080Jaculus_jaculus
ENSPNAG00000017907patl110074.396ENSKMAG00000020848patl110074.096Kryptolebias_marmoratus
ENSPNAG00000017907patl15034.257ENSKMAG00000021275patl25434.005Kryptolebias_marmoratus
ENSPNAG00000017907patl110075.388ENSLBEG00000023617patl110074.670Labrus_bergylta
ENSPNAG00000017907patl15634.889ENSLBEG00000022344patl25335.264Labrus_bergylta
ENSPNAG00000017907patl19747.302ENSLACG00000004640PATL19746.523Latimeria_chalumnae
ENSPNAG00000017907patl15037.470ENSLACG00000005291-5336.829Latimeria_chalumnae
ENSPNAG00000017907patl110066.915ENSLOCG00000000717patl110066.955Lepisosteus_oculatus
ENSPNAG00000017907patl17750.536ENSLAFG00000015161PATL19946.024Loxodonta_africana
ENSPNAG00000017907patl15136.983ENSLAFG00000031124PATL27137.105Loxodonta_africana
ENSPNAG00000017907patl18462.295ENSMFAG00000040851PATL18449.617Macaca_fascicularis
ENSPNAG00000017907patl18462.295ENSMMUG00000017287PATL18449.617Macaca_mulatta
ENSPNAG00000017907patl18462.295ENSMNEG00000038692PATL18449.617Macaca_nemestrina
ENSPNAG00000017907patl18462.295ENSMLEG00000030044PATL18449.464Mandrillus_leucophaeus
ENSPNAG00000017907patl15433.929ENSMAMG00000013327patl26034.937Mastacembelus_armatus
ENSPNAG00000017907patl19975.032ENSMAMG00000003950patl19975.481Mastacembelus_armatus
ENSPNAG00000017907patl110074.217ENSMZEG00005013404patl110074.519Maylandia_zebra
ENSPNAG00000017907patl15138.875ENSMGAG00000001309PATL26538.213Meleagris_gallopavo
ENSPNAG00000017907patl19245.796ENSMGAG00000003406PATL19644.667Meleagris_gallopavo
ENSPNAG00000017907patl19441.078ENSMAUG00000012059Patl19639.821Mesocricetus_auratus
ENSPNAG00000017907patl16034.677ENSMAUG00000001008Patl27537.028Mesocricetus_auratus
ENSPNAG00000017907patl18462.295ENSMICG00000004172PATL17678.125Microcebus_murinus
ENSPNAG00000017907patl19946.988ENSMOCG00000010087Patl19945.663Microtus_ochrogaster
ENSPNAG00000017907patl15235.731ENSMOCG00000015367Patl27237.084Microtus_ochrogaster
ENSPNAG00000017907patl18089.474ENSMMOG00000013711patl19381.538Mola_mola
ENSPNAG00000017907patl15331.490ENSMMOG00000001299patl25931.282Mola_mola
ENSPNAG00000017907patl15637.255ENSMODG00000017690PATL27137.288Monodelphis_domestica
ENSPNAG00000017907patl19947.052ENSMODG00000020201PATL19945.663Monodelphis_domestica
ENSPNAG00000017907patl19572.049ENSMALG00000018706patl110074.966Monopterus_albus
ENSPNAG00000017907patl15334.670ENSMALG00000008131patl25135.013Monopterus_albus
ENSPNAG00000017907patl19944.591MGP_CAROLIEiJ_G0022739Patl19944.471Mus_caroli
ENSPNAG00000017907patl19944.551ENSMUSG00000046139Patl19944.351Mus_musculus
ENSPNAG00000017907patl19945.749MGP_PahariEiJ_G0014233Patl19944.712Mus_pahari
ENSPNAG00000017907patl19944.671MGP_SPRETEiJ_G0023652Patl19944.471Mus_spretus
ENSPNAG00000017907patl18462.295ENSMPUG00000014607PATL18449.464Mustela_putorius_furo
ENSPNAG00000017907patl19946.041ENSMLUG00000011169PATL19945.588Myotis_lucifugus
ENSPNAG00000017907patl19946.043ENSNGAG00000003682Patl19945.072Nannospalax_galili
ENSPNAG00000017907patl16484.242ENSNBRG00000015372patl19350.070Neolamprologus_brichardi
ENSPNAG00000017907patl15335.294ENSNBRG00000011745patl25735.264Neolamprologus_brichardi
ENSPNAG00000017907patl18462.295ENSNLEG00000013081PATL19259.016Nomascus_leucogenys
ENSPNAG00000017907patl15436.712ENSNLEG00000005673PATL27338.235Nomascus_leucogenys
ENSPNAG00000017907patl16157.143ENSMEUG00000009391PATL17356.774Notamacropus_eugenii
ENSPNAG00000017907patl16260.396ENSOPRG00000007963PATL17160.396Ochotona_princeps
ENSPNAG00000017907patl17343.902ENSODEG00000001792PATL18843.902Octodon_degus
ENSPNAG00000017907patl15335.047ENSONIG00000011519patl25335.264Oreochromis_niloticus
ENSPNAG00000017907patl110072.989ENSONIG00000004170patl110074.670Oreochromis_niloticus
ENSPNAG00000017907patl15534.839ENSOCUG00000006339PATL27535.949Oryctolagus_cuniculus
ENSPNAG00000017907patl18162.295ENSOCUG00000002156PATL19944.111Oryctolagus_cuniculus
ENSPNAG00000017907patl15335.731ENSORLG00000005780patl25535.961Oryzias_latipes
ENSPNAG00000017907patl15735.088ENSORLG00020016506patl25335.961Oryzias_latipes_hni
ENSPNAG00000017907patl17775.822ENSORLG00015022240patl17776.277Oryzias_latipes_hsok
ENSPNAG00000017907patl15635.242ENSORLG00015014500patl25535.961Oryzias_latipes_hsok
ENSPNAG00000017907patl15134.988ENSOMEG00000021628patl25734.739Oryzias_melastigma
ENSPNAG00000017907patl18462.295ENSOGAG00000004351PATL18449.617Otolemur_garnettii
ENSPNAG00000017907patl15436.530ENSOGAG00000004709PATL27237.215Otolemur_garnettii
ENSPNAG00000017907patl19945.181ENSOARG00000012005PATL19245.511Ovis_aries
ENSPNAG00000017907patl15434.945ENSOARG00000003762PATL27236.709Ovis_aries
ENSPNAG00000017907patl15436.712ENSPPAG00000007221PATL27238.235Pan_paniscus
ENSPNAG00000017907patl18462.295ENSPPAG00000034275PATL19942.476Pan_paniscus
ENSPNAG00000017907patl15236.983ENSPPRG00000004279PATL27437.192Panthera_pardus
ENSPNAG00000017907patl18364.151ENSPPRG00000020639PATL19644.264Panthera_pardus
ENSPNAG00000017907patl18462.295ENSPTIG00000019298PATL19944.511Panthera_tigris_altaica
ENSPNAG00000017907patl15237.226ENSPTIG00000018964PATL27437.438Panthera_tigris_altaica
ENSPNAG00000017907patl18462.295ENSPTRG00000003697PATL19259.016Pan_troglodytes
ENSPNAG00000017907patl15436.712ENSPTRG00000041536PATL27238.235Pan_troglodytes
ENSPNAG00000017907patl18462.295ENSPANG00000035620PATL18449.617Papio_anubis
ENSPNAG00000017907patl110078.846ENSPKIG00000016224patl110079.949Paramormyrops_kingsleyae
ENSPNAG00000017907patl15137.745ENSPKIG00000016887patl25536.765Paramormyrops_kingsleyae
ENSPNAG00000017907patl15335.731ENSPSIG00000017690PATL29637.018Pelodiscus_sinensis
ENSPNAG00000017907patl19948.019ENSPSIG00000016206PATL19546.459Pelodiscus_sinensis
ENSPNAG00000017907patl15233.492ENSPMGG00000014550patl26233.586Periophthalmus_magnuspinnatus
ENSPNAG00000017907patl110076.463ENSPMGG00000002644patl110074.623Periophthalmus_magnuspinnatus
ENSPNAG00000017907patl19946.747ENSPEMG00000014215Patl19945.422Peromyscus_maniculatus_bairdii
ENSPNAG00000017907patl15137.531ENSPEMG00000016509Patl27137.931Peromyscus_maniculatus_bairdii
ENSPNAG00000017907patl19946.931ENSPCIG00000010852PATL19945.663Phascolarctos_cinereus
ENSPNAG00000017907patl15337.028ENSPCIG00000018256PATL27637.722Phascolarctos_cinereus
ENSPNAG00000017907patl110075.765ENSPFOG00000007768patl110075.349Poecilia_formosa
ENSPNAG00000017907patl15335.529ENSPFOG00000007305patl25436.020Poecilia_formosa
ENSPNAG00000017907patl15335.529ENSPLAG00000020713patl25436.020Poecilia_latipinna
ENSPNAG00000017907patl15184.962ENSPLAG00000018465patl110074.257Poecilia_latipinna
ENSPNAG00000017907patl110074.539ENSPMEG00000006555patl110074.471Poecilia_mexicana
ENSPNAG00000017907patl15335.529ENSPMEG00000018942patl25436.020Poecilia_mexicana
ENSPNAG00000017907patl18972.423ENSPREG00000003874patl19571.250Poecilia_reticulata
ENSPNAG00000017907patl18462.295ENSPPYG00000003230PATL18449.923Pongo_abelii
ENSPNAG00000017907patl18462.295ENSPCOG00000020770PATL19259.016Propithecus_coquereli
ENSPNAG00000017907patl15737.054ENSPCOG00000000295PATL210039.617Propithecus_coquereli
ENSPNAG00000017907patl17449.599ENSPVAG00000015239PATL19847.068Pteropus_vampyrus
ENSPNAG00000017907patl18589.441ENSPNYG00000018936patl19689.198Pundamilia_nyererei
ENSPNAG00000017907patl15335.142ENSPNYG00000017381patl26034.761Pundamilia_nyererei
ENSPNAG00000017907patl15635.699ENSRNOG00000017061Patl27136.675Rattus_norvegicus
ENSPNAG00000017907patl18462.295ENSRNOG00000021052Patl18449.923Rattus_norvegicus
ENSPNAG00000017907patl18462.295ENSRBIG00000032263PATL19259.016Rhinopithecus_bieti
ENSPNAG00000017907patl18462.295ENSRROG00000032861PATL18449.617Rhinopithecus_roxellana
ENSPNAG00000017907patl18462.295ENSSBOG00000025195PATL19942.701Saimiri_boliviensis_boliviensis
ENSPNAG00000017907patl19947.129ENSSHAG00000004309PATL19945.749Sarcophilus_harrisii
ENSPNAG00000017907patl110079.253ENSSFOG00015009614patl110079.795Scleropages_formosus
ENSPNAG00000017907patl15338.991ENSSFOG00015000720patl25538.725Scleropages_formosus
ENSPNAG00000017907patl17430.743ENSSMAG00000017262patl26435.323Scophthalmus_maximus
ENSPNAG00000017907patl110073.798ENSSMAG00000009482patl110074.371Scophthalmus_maximus
ENSPNAG00000017907patl15334.824ENSSDUG00000022927patl25435.013Seriola_dumerili
ENSPNAG00000017907patl110073.815ENSSDUG00000005362patl110073.404Seriola_dumerili
ENSPNAG00000017907patl110073.665ENSSLDG00000019146patl110073.254Seriola_lalandi_dorsalis
ENSPNAG00000017907patl15235.697ENSSLDG00000017922patl26035.556Seriola_lalandi_dorsalis
ENSPNAG00000017907patl16051.429ENSSARG00000009600PATL16849.714Sorex_araneus
ENSPNAG00000017907patl15634.829ENSSARG00000009047PATL27638.021Sorex_araneus
ENSPNAG00000017907patl19948.193ENSSPUG00000009453PATL19946.627Sphenodon_punctatus
ENSPNAG00000017907patl15189.698ENSSPAG00000003187patl19977.179Stegastes_partitus
ENSPNAG00000017907patl15235.084ENSSPAG00000004784patl26234.729Stegastes_partitus
ENSPNAG00000017907patl18064.151ENSSSCG00000013124PATL19944.658Sus_scrofa
ENSPNAG00000017907patl110068.118ENSTRUG00000000709patl110067.008Takifugu_rubripes
ENSPNAG00000017907patl15334.204ENSTRUG00000005647patl25634.860Takifugu_rubripes
ENSPNAG00000017907patl18941.837ENSTBEG00000000796PATL18740.078Tupaia_belangeri
ENSPNAG00000017907patl16954.545ENSTTRG00000009389PATL17854.768Tursiops_truncatus
ENSPNAG00000017907patl15635.650ENSUAMG00000018533PATL27236.946Ursus_americanus
ENSPNAG00000017907patl18278.378ENSUMAG00000018634PATL19648.955Ursus_maritimus
ENSPNAG00000017907patl15436.449ENSUMAG00000007738PATL27237.192Ursus_maritimus
ENSPNAG00000017907patl15238.200ENSVVUG00000011576PATL27438.424Vulpes_vulpes
ENSPNAG00000017907patl18463.158ENSVVUG00000016668PATL19349.163Vulpes_vulpes
ENSPNAG00000017907patl15137.931ENSXETG00000014167patl26637.406Xenopus_tropicalis
ENSPNAG00000017907patl17384.746ENSXCOG00000010808patl19981.356Xiphophorus_couchianus
ENSPNAG00000017907patl110074.286ENSXMAG00000013834patl110074.194Xiphophorus_maculatus
ENSPNAG00000017907patl15335.529ENSXMAG00000018464patl25436.020Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us