EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000017982 (Gene tree)
Gene ID: 108442909
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 11554 bases
Position: chrKV575794.1:83388-94941
Accession: 108442909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000012250	B3_4	PF03483.17	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000019477	-	2281	XM_017723202	ENSPNAP00000012250	565 (aa)	XP_017578691	UPI0008144957

Gene Model

Click here to download ENSPNAG00000017982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000017982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000017982	lrrc47	100	54.872	ENSG00000130764	LRRC47	100	55.043	Homo_sapiens
ENSPNAG00000017982	lrrc47	98	65.709	ENSAPOG00000019553	lrrc47	99	65.412	Acanthochromis_polyacanthus
ENSPNAG00000017982	lrrc47	76	56.009	ENSAMEG00000009152	LRRC47	95	56.849	Ailuropoda_melanoleuca
ENSPNAG00000017982	lrrc47	67	63.636	ENSAPLG00000003167	LRRC47	100	61.954	Anas_platyrhynchos
ENSPNAG00000017982	lrrc47	66	60.313	ENSACAG00000008267	LRRC47	99	60.677	Anolis_carolinensis
ENSPNAG00000017982	lrrc47	100	54.017	ENSANAG00000025576	LRRC47	100	54.188	Aotus_nancymaae
ENSPNAG00000017982	lrrc47	98	52.257	ENSBTAG00000004738	LRRC47	100	52.650	Bos_taurus
ENSPNAG00000017982	lrrc47	95	52.783	ENSCAFG00000019492	LRRC47	99	52.911	Canis_familiaris
ENSPNAG00000017982	lrrc47	99	53.253	ENSCAFG00020009667	LRRC47	99	53.425	Canis_lupus_dingo
ENSPNAG00000017982	lrrc47	99	52.397	ENSCHIG00000022607	LRRC47	99	53.082	Capra_hircus
ENSPNAG00000017982	lrrc47	95	54.219	ENSTSYG00000009326	LRRC47	97	54.657	Carlito_syrichta
ENSPNAG00000017982	lrrc47	65	59.894	ENSCAPG00000016517	LRRC47	100	60.158	Cavia_aperea
ENSPNAG00000017982	lrrc47	100	53.162	ENSCPOG00000014931	LRRC47	96	53.333	Cavia_porcellus
ENSPNAG00000017982	lrrc47	100	54.359	ENSCCAG00000024895	LRRC47	100	54.530	Cebus_capucinus
ENSPNAG00000017982	lrrc47	100	54.701	ENSCATG00000029337	LRRC47	100	54.701	Cercocebus_atys
ENSPNAG00000017982	lrrc47	100	53.265	ENSCLAG00000006093	LRRC47	100	53.265	Chinchilla_lanigera
ENSPNAG00000017982	lrrc47	100	54.872	ENSCSAG00000000727	LRRC47	100	54.872	Chlorocebus_sabaeus
ENSPNAG00000017982	lrrc47	98	54.237	ENSCPBG00000019404	LRRC47	98	54.300	Chrysemys_picta_bellii
ENSPNAG00000017982	lrrc47	79	56.522	ENSCANG00000030701	LRRC47	96	56.522	Colobus_angolensis_palliatus
ENSPNAG00000017982	lrrc47	98	53.310	ENSCGRG00001015159	Lrrc47	89	54.181	Cricetulus_griseus_chok1gshd
ENSPNAG00000017982	lrrc47	66	58.793	ENSCGRG00000017336	Lrrc47	100	60.053	Cricetulus_griseus_crigri
ENSPNAG00000017982	lrrc47	98	63.196	ENSCSEG00000006217	lrrc47	95	63.262	Cynoglossus_semilaevis
ENSPNAG00000017982	lrrc47	65	59.367	ENSDORG00000016594	Lrrc47	100	60.158	Dipodomys_ordii
ENSPNAG00000017982	lrrc47	100	54.685	ENSEASG00005021788	LRRC47	100	55.026	Equus_asinus_asinus
ENSPNAG00000017982	lrrc47	98	54.688	ENSECAG00000022472	LRRC47	91	54.778	Equus_caballus
ENSPNAG00000017982	lrrc47	98	63.523	ENSELUG00000017544	lrrc47	97	64.171	Esox_lucius
ENSPNAG00000017982	lrrc47	92	53.774	ENSFCAG00000011632	LRRC47	95	53.506	Felis_catus
ENSPNAG00000017982	lrrc47	70	62.374	ENSFALG00000009631	LRRC47	90	61.364	Ficedula_albicollis
ENSPNAG00000017982	lrrc47	98	62.745	ENSGMOG00000015674	lrrc47	99	62.950	Gadus_morhua
ENSPNAG00000017982	lrrc47	99	51.045	ENSGALG00000050995	LRRC47	99	51.389	Gallus_gallus
ENSPNAG00000017982	lrrc47	98	63.784	ENSGACG00000005550	lrrc47	98	63.441	Gasterosteus_aculeatus
ENSPNAG00000017982	lrrc47	100	52.912	ENSGAGG00000022584	LRRC47	100	54.305	Gopherus_agassizii
ENSPNAG00000017982	lrrc47	100	55.214	ENSGGOG00000015571	LRRC47	100	55.385	Gorilla_gorilla
ENSPNAG00000017982	lrrc47	100	52.901	ENSHGLG00000018278	LRRC47	96	53.072	Heterocephalus_glaber_female
ENSPNAG00000017982	lrrc47	70	58.128	ENSHGLG00100008507	LRRC47	99	58.458	Heterocephalus_glaber_male
ENSPNAG00000017982	lrrc47	99	64.235	ENSHCOG00000006348	lrrc47	98	63.345	Hippocampus_comes
ENSPNAG00000017982	lrrc47	100	54.329	ENSSTOG00000027559	LRRC47	100	54.701	Ictidomys_tridecemlineatus
ENSPNAG00000017982	lrrc47	98	53.646	ENSJJAG00000017474	Lrrc47	97	53.846	Jaculus_jaculus
ENSPNAG00000017982	lrrc47	98	67.204	ENSKMAG00000003414	lrrc47	99	66.129	Kryptolebias_marmoratus
ENSPNAG00000017982	lrrc47	100	54.530	ENSLAFG00000011657	LRRC47	99	54.701	Loxodonta_africana
ENSPNAG00000017982	lrrc47	100	40.704	ENSMFAG00000045730	LRRC47	90	57.917	Macaca_fascicularis
ENSPNAG00000017982	lrrc47	98	55.208	ENSMNEG00000042488	LRRC47	100	54.872	Macaca_nemestrina
ENSPNAG00000017982	lrrc47	77	56.570	ENSMLEG00000043735	LRRC47	90	56.570	Mandrillus_leucophaeus
ENSPNAG00000017982	lrrc47	98	53.484	ENSMAUG00000021337	Lrrc47	97	54.355	Mesocricetus_auratus
ENSPNAG00000017982	lrrc47	100	53.846	ENSMICG00000026816	LRRC47	100	53.504	Microcebus_murinus
ENSPNAG00000017982	lrrc47	100	52.759	ENSMOCG00000021279	Lrrc47	100	53.966	Microtus_ochrogaster
ENSPNAG00000017982	lrrc47	99	64.591	ENSMMOG00000017007	lrrc47	99	64.298	Mola_mola
ENSPNAG00000017982	lrrc47	98	55.749	ENSMODG00000006554	LRRC47	98	55.749	Monodelphis_domestica
ENSPNAG00000017982	lrrc47	98	54.435	MGP_CAROLIEiJ_G0026864	Lrrc47	99	54.202	Mus_caroli
ENSPNAG00000017982	lrrc47	98	54.087	ENSMUSG00000029028	Lrrc47	99	53.859	Mus_musculus
ENSPNAG00000017982	lrrc47	98	53.565	MGP_PahariEiJ_G0029212	Lrrc47	99	54.031	Mus_pahari
ENSPNAG00000017982	lrrc47	98	53.913	MGP_SPRETEiJ_G0027857	Lrrc47	99	53.688	Mus_spretus
ENSPNAG00000017982	lrrc47	66	60.789	ENSMPUG00000007321	LRRC47	75	61.053	Mustela_putorius_furo
ENSPNAG00000017982	lrrc47	98	52.356	ENSNGAG00000022153	Lrrc47	98	53.833	Nannospalax_galili
ENSPNAG00000017982	lrrc47	100	54.202	ENSNLEG00000008131	LRRC47	100	53.688	Nomascus_leucogenys
ENSPNAG00000017982	lrrc47	84	55.081	ENSODEG00000010882	LRRC47	93	54.990	Octodon_degus
ENSPNAG00000017982	lrrc47	96	63.653	ENSORLG00000002532	lrrc47	99	63.670	Oryzias_latipes
ENSPNAG00000017982	lrrc47	99	63.475	ENSORLG00020019601	lrrc47	99	63.766	Oryzias_latipes_hni
ENSPNAG00000017982	lrrc47	99	63.298	ENSORLG00015014040	lrrc47	99	63.588	Oryzias_latipes_hsok
ENSPNAG00000017982	lrrc47	99	63.233	ENSOMEG00000008989	lrrc47	99	62.877	Oryzias_melastigma
ENSPNAG00000017982	lrrc47	100	54.872	ENSOGAG00000001553	LRRC47	100	54.872	Otolemur_garnettii
ENSPNAG00000017982	lrrc47	98	52.257	ENSOARG00000015290	LRRC47	100	52.137	Ovis_aries
ENSPNAG00000017982	lrrc47	74	59.441	ENSPPAG00000036370	-	100	59.674	Pan_paniscus
ENSPNAG00000017982	lrrc47	98	52.778	ENSPPRG00000005261	LRRC47	100	52.891	Panthera_pardus
ENSPNAG00000017982	lrrc47	100	55.214	ENSPTRG00000000068	LRRC47	100	55.385	Pan_troglodytes
ENSPNAG00000017982	lrrc47	100	55.385	ENSPANG00000012437	LRRC47	100	55.385	Papio_anubis
ENSPNAG00000017982	lrrc47	66	64.474	ENSPSIG00000004196	LRRC47	100	65.274	Pelodiscus_sinensis
ENSPNAG00000017982	lrrc47	65	59.894	ENSPEMG00000021068	Lrrc47	100	60.317	Peromyscus_maniculatus_bairdii
ENSPNAG00000017982	lrrc47	98	57.666	ENSPCIG00000003638	LRRC47	99	56.775	Phascolarctos_cinereus
ENSPNAG00000017982	lrrc47	93	66.221	ENSPFOG00000000992	lrrc47	93	65.094	Poecilia_formosa
ENSPNAG00000017982	lrrc47	98	65.884	ENSPLAG00000008077	lrrc47	99	64.821	Poecilia_latipinna
ENSPNAG00000017982	lrrc47	98	65.343	ENSPMEG00000007367	lrrc47	99	64.413	Poecilia_mexicana
ENSPNAG00000017982	lrrc47	100	55.385	ENSPPYG00000001960	LRRC47	100	55.556	Pongo_abelii
ENSPNAG00000017982	lrrc47	98	54.514	ENSPCOG00000019161	LRRC47	100	53.754	Propithecus_coquereli
ENSPNAG00000017982	lrrc47	100	53.012	ENSPVAG00000009839	LRRC47	100	52.560	Pteropus_vampyrus
ENSPNAG00000017982	lrrc47	100	52.568	ENSRNOG00000024796	Lrrc47	100	53.253	Rattus_norvegicus
ENSPNAG00000017982	lrrc47	100	54.872	ENSRBIG00000019437	LRRC47	100	54.872	Rhinopithecus_bieti
ENSPNAG00000017982	lrrc47	100	54.872	ENSRROG00000043182	LRRC47	100	54.872	Rhinopithecus_roxellana
ENSPNAG00000017982	lrrc47	79	57.269	ENSSBOG00000026334	LRRC47	92	57.489	Saimiri_boliviensis_boliviensis
ENSPNAG00000017982	lrrc47	98	51.123	ENSSHAG00000007360	LRRC47	99	50.767	Sarcophilus_harrisii
ENSPNAG00000017982	lrrc47	98	65.054	ENSSMAG00000009344	lrrc47	99	64.222	Scophthalmus_maximus
ENSPNAG00000017982	lrrc47	99	66.430	ENSSDUG00000014618	lrrc47	99	64.831	Seriola_dumerili
ENSPNAG00000017982	lrrc47	99	66.252	ENSSLDG00000018908	lrrc47	99	64.654	Seriola_lalandi_dorsalis
ENSPNAG00000017982	lrrc47	98	53.184	ENSSPUG00000010277	LRRC47	99	52.941	Sphenodon_punctatus
ENSPNAG00000017982	lrrc47	98	66.427	ENSSPAG00000005188	lrrc47	99	66.308	Stegastes_partitus
ENSPNAG00000017982	lrrc47	100	52.991	ENSSSCG00000039516	LRRC47	100	53.162	Sus_scrofa
ENSPNAG00000017982	lrrc47	71	60.945	ENSTGUG00000002737	LRRC47	97	61.013	Taeniopygia_guttata
ENSPNAG00000017982	lrrc47	99	61.717	ENSTRUG00000017696	lrrc47	99	60.830	Takifugu_rubripes
ENSPNAG00000017982	lrrc47	98	62.816	ENSTNIG00000010923	lrrc47	98	62.635	Tetraodon_nigroviridis
ENSPNAG00000017982	lrrc47	100	52.560	ENSTTRG00000011751	LRRC47	100	52.730	Tursiops_truncatus
ENSPNAG00000017982	lrrc47	89	53.551	ENSUAMG00000012080	LRRC47	97	54.563	Ursus_americanus
ENSPNAG00000017982	lrrc47	66	58.747	ENSUMAG00000010781	LRRC47	81	60.052	Ursus_maritimus
ENSPNAG00000017982	lrrc47	98	51.038	ENSVVUG00000027118	LRRC47	97	51.045	Vulpes_vulpes
ENSPNAG00000017982	lrrc47	100	58.115	ENSXETG00000006029	lrrc47	99	57.766	Xenopus_tropicalis
ENSPNAG00000017982	lrrc47	99	65.009	ENSXCOG00000002813	lrrc47	99	65.009	Xiphophorus_couchianus
ENSPNAG00000017982	lrrc47	98	65.162	ENSXMAG00000019386	lrrc47	99	65.333	Xiphophorus_maculatus