EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000018051 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2451 bases
Position: chrKV575342.1:3580584-3583034
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030964	RRM_1	PF00076.22	1.5e-35	1	2
ENSPNAP00000030964	RRM_1	PF00076.22	1.5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000019521	-	609	-	ENSPNAP00000030964	202 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000018051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000018051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000018051	-	80	39.181	ENSPNAG00000011639	dazap1	52	39.181
ENSPNAG00000018051	-	71	47.368	ENSPNAG00000015123	-	65	47.368
ENSPNAG00000018051	-	81	35.135	ENSPNAG00000028963	hnrnpabb	62	34.940
ENSPNAG00000018051	-	80	59.868	ENSPNAG00000007752	hnrnpa1a	72	58.642
ENSPNAG00000018051	-	79	38.217	ENSPNAG00000000844	msi2b	52	36.842
ENSPNAG00000018051	-	82	30.921	ENSPNAG00000003272	tial1	71	30.921
ENSPNAG00000018051	-	79	39.103	ENSPNAG00000014957	msi2a	51	39.103
ENSPNAG00000018051	-	79	44.776	ENSPNAG00000016380	hnrnpdl	51	44.776
ENSPNAG00000018051	-	80	62.963	ENSPNAG00000021630	-	58	62.963
ENSPNAG00000018051	-	79	39.103	ENSPNAG00000019337	msi1	52	39.103
ENSPNAG00000018051	-	86	38.636	ENSPNAG00000000458	hnrnpaba	55	38.636
ENSPNAG00000018051	-	81	82.099	ENSPNAG00000023333	HNRNPA0	55	82.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000018051	-	80	79.874	ENSAOCG00000015951	-	95	79.874	Amphiprion_ocellaris
ENSPNAG00000018051	-	81	71.429	ENSAOCG00000015914	-	63	71.429	Amphiprion_ocellaris
ENSPNAG00000018051	-	81	71.429	ENSAPEG00000002224	-	73	71.429	Amphiprion_percula
ENSPNAG00000018051	-	80	79.874	ENSAPEG00000002274	-	95	79.874	Amphiprion_percula
ENSPNAG00000018051	-	81	70.988	ENSACLG00000008978	-	80	70.988	Astatotilapia_calliptera
ENSPNAG00000018051	-	81	70.370	ENSCVAG00000008324	-	75	70.370	Cyprinodon_variegatus
ENSPNAG00000018051	-	76	39.610	ENSEBUG00000010003	-	80	39.610	Eptatretus_burgeri
ENSPNAG00000018051	-	80	83.951	ENSELUG00000014407	-	96	83.951	Esox_lucius
ENSPNAG00000018051	-	81	70.988	ENSHBUG00000023867	-	80	70.988	Haplochromis_burtoni
ENSPNAG00000018051	-	83	69.182	ENSHCOG00000007180	-	72	69.182	Hippocampus_comes
ENSPNAG00000018051	-	80	72.050	ENSLBEG00000006362	-	77	72.050	Labrus_bergylta
ENSPNAG00000018051	-	56	81.416	ENSLOCG00000012121	-	61	81.416	Lepisosteus_oculatus
ENSPNAG00000018051	-	81	72.050	ENSMAMG00000017728	-	66	72.050	Mastacembelus_armatus
ENSPNAG00000018051	-	81	70.988	ENSMZEG00005001063	-	79	70.988	Maylandia_zebra
ENSPNAG00000018051	-	80	80.745	ENSMMOG00000004242	-	97	80.745	Mola_mola
ENSPNAG00000018051	-	77	46.154	ENSMEUG00000003051	-	51	45.625	Notamacropus_eugenii
ENSPNAG00000018051	-	80	61.875	ENSORLG00000023542	-	62	61.875	Oryzias_latipes
ENSPNAG00000018051	-	81	57.055	ENSORLG00000030284	-	59	54.701	Oryzias_latipes
ENSPNAG00000018051	-	80	62.025	ENSORLG00000023176	-	59	62.025	Oryzias_latipes
ENSPNAG00000018051	-	80	60.377	ENSORLG00020007084	-	75	60.377	Oryzias_latipes_hni
ENSPNAG00000018051	-	80	61.783	ENSORLG00020006029	-	55	61.783	Oryzias_latipes_hni
ENSPNAG00000018051	-	80	69.753	ENSORLG00020007171	-	95	69.753	Oryzias_latipes_hni
ENSPNAG00000018051	-	79	56.875	ENSOMEG00000002509	-	70	56.875	Oryzias_melastigma
ENSPNAG00000018051	-	79	43.125	ENSOMEG00000006327	-	64	43.125	Oryzias_melastigma
ENSPNAG00000018051	-	79	55.901	ENSOMEG00000021030	-	75	55.901	Oryzias_melastigma
ENSPNAG00000018051	-	79	56.875	ENSOMEG00000012368	-	68	56.875	Oryzias_melastigma
ENSPNAG00000018051	-	81	54.545	ENSOMEG00000006903	-	67	54.878	Oryzias_melastigma
ENSPNAG00000018051	-	86	51.124	ENSOMEG00000009566	-	96	51.124	Oryzias_melastigma
ENSPNAG00000018051	-	79	57.500	ENSOMEG00000023475	-	54	57.500	Oryzias_melastigma
ENSPNAG00000018051	-	80	57.317	ENSOMEG00000002000	-	54	57.317	Oryzias_melastigma
ENSPNAG00000018051	-	79	34.328	ENSOMEG00000002084	-	68	34.328	Oryzias_melastigma
ENSPNAG00000018051	-	81	70.370	ENSPREG00000010603	-	58	70.370	Poecilia_reticulata
ENSPNAG00000018051	-	81	70.988	ENSPNYG00000020763	-	80	70.988	Pundamilia_nyererei
ENSPNAG00000018051	-	80	64.596	ENSSHAG00000015609	-	80	64.596	Sarcophilus_harrisii
ENSPNAG00000018051	-	80	72.050	ENSSDUG00000002394	-	85	72.050	Seriola_dumerili
ENSPNAG00000018051	-	81	78.947	ENSSLDG00000024685	-	86	78.947	Seriola_lalandi_dorsalis