EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000018075 (Gene tree)
Gene ID: 108444172
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG-binding domain protein 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 41669 bases
Position: chrKV575911.1:297688-339356
Accession: 108444172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000012343	MBD	PF01429.19	1.8e-13	1	1
ENSPNAP00000012355	MBD	PF01429.19	1.8e-13	1	1
ENSPNAP00000030992	MBD	PF01429.19	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000019558	-	6955	XM_017725174	ENSPNAP00000012355	837 (aa)	XP_017580663	UPI000814A7F3
ENSPNAT00000036472	-	6852	XM_017725177	ENSPNAP00000030992	789 (aa)	XP_017580666	UPI0008144891
ENSPNAT00000019583	-	6996	XM_017725172	ENSPNAP00000012343	837 (aa)	XP_017580661	UPI000814A7F3

Gene Model

Click here to download ENSPNAG00000018075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000018075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000018075	mbd1b	92	39.573	ENSAPOG00000012810	mbd1b	91	41.074	Acanthochromis_polyacanthus
ENSPNAG00000018075	mbd1b	92	37.317	ENSACIG00000010590	mbd1b	88	37.798	Amphilophus_citrinellus
ENSPNAG00000018075	mbd1b	92	39.223	ENSAOCG00000020272	mbd1b	91	40.075	Amphiprion_ocellaris
ENSPNAG00000018075	mbd1b	92	38.005	ENSAPEG00000023230	mbd1b	91	39.698	Amphiprion_percula
ENSPNAG00000018075	mbd1b	98	39.202	ENSATEG00000009608	mbd1b	97	39.243	Anabas_testudineus
ENSPNAG00000018075	mbd1b	92	38.529	ENSACLG00000021383	mbd1b	89	39.529	Astatotilapia_calliptera
ENSPNAG00000018075	mbd1b	93	37.545	ENSCSEG00000009082	mbd1b	94	38.278	Cynoglossus_semilaevis
ENSPNAG00000018075	mbd1b	98	43.158	ENSCVAG00000001167	mbd1b	96	39.763	Cyprinodon_variegatus
ENSPNAG00000018075	mbd1b	95	42.449	ENSDARG00000025699	mbd1b	83	41.974	Danio_rerio
ENSPNAG00000018075	mbd1b	67	31.287	ENSEASG00005003857	MBD1	90	31.503	Equus_asinus_asinus
ENSPNAG00000018075	mbd1b	96	40.736	ENSELUG00000004375	mbd1b	93	41.435	Esox_lucius
ENSPNAG00000018075	mbd1b	93	38.902	ENSFHEG00000020120	mbd1b	91	39.130	Fundulus_heteroclitus
ENSPNAG00000018075	mbd1b	81	48.128	ENSGAFG00000008975	mbd1b	90	39.748	Gambusia_affinis
ENSPNAG00000018075	mbd1b	70	55.405	ENSGACG00000012106	-	98	57.576	Gasterosteus_aculeatus
ENSPNAG00000018075	mbd1b	92	36.881	ENSHBUG00000014270	mbd1b	89	39.457	Haplochromis_burtoni
ENSPNAG00000018075	mbd1b	83	39.487	ENSHCOG00000009952	mbd1b	94	37.439	Hippocampus_comes
ENSPNAG00000018075	mbd1b	97	57.587	ENSIPUG00000015243	-	99	57.228	Ictalurus_punctatus
ENSPNAG00000018075	mbd1b	99	36.042	ENSKMAG00000020760	mbd1b	92	38.025	Kryptolebias_marmoratus
ENSPNAG00000018075	mbd1b	55	63.768	ENSLACG00000002414	-	63	63.768	Latimeria_chalumnae
ENSPNAG00000018075	mbd1b	67	38.475	ENSMAMG00000023341	-	92	36.006	Mastacembelus_armatus
ENSPNAG00000018075	mbd1b	92	38.529	ENSMZEG00005010421	mbd1b	89	39.529	Maylandia_zebra
ENSPNAG00000018075	mbd1b	85	58.416	ENSMMOG00000011607	mbd1b	88	58.416	Mola_mola
ENSPNAG00000018075	mbd1b	97	38.308	ENSMALG00000007808	mbd1b	96	40.023	Monopterus_albus
ENSPNAG00000018075	mbd1b	92	38.143	ENSONIG00000020289	mbd1b	98	37.791	Oreochromis_niloticus
ENSPNAG00000018075	mbd1b	92	37.515	ENSORLG00000029390	mbd1b	92	40.024	Oryzias_latipes
ENSPNAG00000018075	mbd1b	97	38.706	ENSORLG00020000575	mbd1b	90	40.050	Oryzias_latipes_hni
ENSPNAG00000018075	mbd1b	97	36.879	ENSORLG00015014812	mbd1b	90	39.826	Oryzias_latipes_hsok
ENSPNAG00000018075	mbd1b	92	36.600	ENSOMEG00000023660	mbd1b	89	38.462	Oryzias_melastigma
ENSPNAG00000018075	mbd1b	51	50.617	ENSPCIG00000027937	-	60	50.617	Phascolarctos_cinereus
ENSPNAG00000018075	mbd1b	95	36.288	ENSPFOG00000007511	mbd1b	98	36.742	Poecilia_formosa
ENSPNAG00000018075	mbd1b	81	47.568	ENSPLAG00000021258	mbd1b	92	38.366	Poecilia_latipinna
ENSPNAG00000018075	mbd1b	81	46.486	ENSPMEG00000024145	mbd1b	91	38.269	Poecilia_mexicana
ENSPNAG00000018075	mbd1b	81	49.180	ENSPREG00000021805	mbd1b	91	38.994	Poecilia_reticulata
ENSPNAG00000018075	mbd1b	86	58.974	ENSSFOG00015008591	-	88	58.974	Scleropages_formosus
ENSPNAG00000018075	mbd1b	93	39.512	ENSSMAG00000014640	mbd1b	83	41.010	Scophthalmus_maximus
ENSPNAG00000018075	mbd1b	92	38.586	ENSSDUG00000012996	mbd1b	85	39.651	Seriola_dumerili
ENSPNAG00000018075	mbd1b	74	53.103	ENSSLDG00000012422	mbd1b	86	44.809	Seriola_lalandi_dorsalis
ENSPNAG00000018075	mbd1b	92	39.417	ENSSPAG00000021447	mbd1b	86	51.163	Stegastes_partitus
ENSPNAG00000018075	mbd1b	99	35.433	ENSTRUG00000013422	mbd1b	99	36.444	Takifugu_rubripes
ENSPNAG00000018075	mbd1b	88	48.087	ENSXMAG00000005628	mbd1b	97	37.427	Xiphophorus_maculatus