EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000018173 (Gene tree)
Gene ID: -
Gene Symbol: rbfox3b
Alias: rbfox3l|si:ch73-322f21.1
Full Name: RNA binding protein fox-1 homolog 3-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 70214 bases
Position: chrKV575422.1:1843442-1913655
Accession: 108433502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000012394	Fox-1_C	PF12414.8	2.6e-26	1	1
ENSPNAP00000012394	RRM_1	PF00076.22	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000036498	-	855	XM_017708117	ENSPNAP00000012394	284 (aa)	XP_017563606	-

Gene Model

Click here to download ENSPNAG00000018173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000018173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000018173	rbfox3b	61	57.269	ENSPNAG00000001620	rbfox1l	60	56.769
ENSPNAG00000018173	rbfox3b	79	47.000	ENSPNAG00000014196	-	58	53.279
ENSPNAG00000018173	rbfox3b	80	51.724	ENSPNAG00000000168	rbfox2	68	52.349
ENSPNAG00000018173	rbfox3b	90	56.627	ENSPNAG00000023109	rbfox1	89	56.798
ENSPNAG00000018173	rbfox3b	75	96.774	ENSPNAG00000002889	rbfox3a	79	90.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000018173	rbfox3b	82	72.449	ENSG00000167281	RBFOX3	83	87.234	Homo_sapiens
ENSPNAG00000018173	rbfox3b	80	63.235	ENSAPOG00000015658	-	90	60.333	Acanthochromis_polyacanthus
ENSPNAG00000018173	rbfox3b	91	71.019	ENSAPOG00000021630	rbfox3b	85	71.154	Acanthochromis_polyacanthus
ENSPNAG00000018173	rbfox3b	88	58.282	ENSAMEG00000014170	RBFOX3	87	60.641	Ailuropoda_melanoleuca
ENSPNAG00000018173	rbfox3b	91	74.333	ENSACIG00000010817	rbfox3b	99	74.333	Amphilophus_citrinellus
ENSPNAG00000018173	rbfox3b	85	57.605	ENSACIG00000003768	-	87	57.605	Amphilophus_citrinellus
ENSPNAG00000018173	rbfox3b	86	67.944	ENSAOCG00000010786	-	83	68.543	Amphiprion_ocellaris
ENSPNAG00000018173	rbfox3b	90	71.154	ENSAOCG00000012358	rbfox3b	85	71.154	Amphiprion_ocellaris
ENSPNAG00000018173	rbfox3b	85	63.279	ENSAPEG00000015891	-	83	64.062	Amphiprion_percula
ENSPNAG00000018173	rbfox3b	91	69.000	ENSAPEG00000019081	rbfox3b	84	69.000	Amphiprion_percula
ENSPNAG00000018173	rbfox3b	86	64.120	ENSATEG00000023101	-	97	63.608	Anabas_testudineus
ENSPNAG00000018173	rbfox3b	91	64.826	ENSATEG00000019945	rbfox3b	99	64.826	Anabas_testudineus
ENSPNAG00000018173	rbfox3b	90	62.739	ENSACAG00000016093	RBFOX3	87	64.217	Anolis_carolinensis
ENSPNAG00000018173	rbfox3b	83	71.939	ENSANAG00000023457	RBFOX3	100	64.744	Aotus_nancymaae
ENSPNAG00000018173	rbfox3b	91	72.632	ENSACLG00000025552	-	93	67.845	Astatotilapia_calliptera
ENSPNAG00000018173	rbfox3b	91	70.513	ENSACLG00000020011	rbfox3b	100	70.968	Astatotilapia_calliptera
ENSPNAG00000018173	rbfox3b	90	78.914	ENSAMXG00000042841	rbfox3b	89	78.914	Astyanax_mexicanus
ENSPNAG00000018173	rbfox3b	87	70.652	ENSAMXG00000037246	rbfox3a	95	65.723	Astyanax_mexicanus
ENSPNAG00000018173	rbfox3b	82	73.846	ENSBTAG00000006280	RBFOX3	82	87.234	Bos_taurus
ENSPNAG00000018173	rbfox3b	82	71.939	ENSCJAG00000009563	RBFOX3	83	87.234	Callithrix_jacchus
ENSPNAG00000018173	rbfox3b	70	64.919	ENSCAFG00000005547	RBFOX3	82	70.435	Canis_familiaris
ENSPNAG00000018173	rbfox3b	83	72.821	ENSCAFG00020008126	RBFOX3	81	84.314	Canis_lupus_dingo
ENSPNAG00000018173	rbfox3b	83	72.449	ENSCHIG00000009124	RBFOX3	78	87.500	Capra_hircus
ENSPNAG00000018173	rbfox3b	76	89.655	ENSTSYG00000029617	RBFOX3	83	85.417	Carlito_syrichta
ENSPNAG00000018173	rbfox3b	85	60.759	ENSCPOG00000021703	RBFOX3	83	80.000	Cavia_porcellus
ENSPNAG00000018173	rbfox3b	82	71.939	ENSCCAG00000028450	RBFOX3	81	87.234	Cebus_capucinus
ENSPNAG00000018173	rbfox3b	86	64.460	ENSCATG00000018349	RBFOX3	100	65.064	Cercocebus_atys
ENSPNAG00000018173	rbfox3b	85	60.510	ENSCLAG00000006449	RBFOX3	83	83.333	Chinchilla_lanigera
ENSPNAG00000018173	rbfox3b	85	61.745	ENSCSAG00000002355	RBFOX3	100	65.064	Chlorocebus_sabaeus
ENSPNAG00000018173	rbfox3b	86	63.973	ENSCPBG00000010904	RBFOX3	100	64.516	Chrysemys_picta_bellii
ENSPNAG00000018173	rbfox3b	83	72.449	ENSCANG00000043120	RBFOX3	81	84.314	Colobus_angolensis_palliatus
ENSPNAG00000018173	rbfox3b	76	82.759	ENSCGRG00001019476	Rbfox3	83	79.592	Cricetulus_griseus_chok1gshd
ENSPNAG00000018173	rbfox3b	76	82.759	ENSCGRG00000003268	Rbfox3	83	79.592	Cricetulus_griseus_crigri
ENSPNAG00000018173	rbfox3b	91	69.231	ENSCSEG00000015567	RBFOX3	85	69.231	Cynoglossus_semilaevis
ENSPNAG00000018173	rbfox3b	94	56.481	ENSCSEG00000020606	RBFOX3	87	55.219	Cynoglossus_semilaevis
ENSPNAG00000018173	rbfox3b	90	71.154	ENSCVAG00000006882	rbfox3b	85	71.154	Cyprinodon_variegatus
ENSPNAG00000018173	rbfox3b	85	63.576	ENSDARG00000010083	rbfox3a	96	66.038	Danio_rerio
ENSPNAG00000018173	rbfox3b	93	78.439	ENSDARG00000074310	rbfox3b	97	85.492	Danio_rerio
ENSPNAG00000018173	rbfox3b	67	53.901	ENSDNOG00000039391	RBFOX3	77	87.234	Dasypus_novemcinctus
ENSPNAG00000018173	rbfox3b	85	51.316	ENSDORG00000005352	Rbfox3	81	84.783	Dipodomys_ordii
ENSPNAG00000018173	rbfox3b	91	55.046	ENSEBUG00000002129	RBFOX3	93	55.352	Eptatretus_burgeri
ENSPNAG00000018173	rbfox3b	75	53.527	ENSEBUG00000013559	RBFOX3	69	51.528	Eptatretus_burgeri
ENSPNAG00000018173	rbfox3b	85	62.542	ENSEASG00005005059	RBFOX3	100	64.557	Equus_asinus_asinus
ENSPNAG00000018173	rbfox3b	86	62.667	ENSECAG00000023811	RBFOX3	100	64.557	Equus_caballus
ENSPNAG00000018173	rbfox3b	71	78.846	ENSEEUG00000013974	RBFOX3	70	80.769	Erinaceus_europaeus
ENSPNAG00000018173	rbfox3b	53	49.171	ENSELUG00000009807	-	54	46.465	Esox_lucius
ENSPNAG00000018173	rbfox3b	91	78.799	ENSELUG00000017963	rbfox3b	100	78.648	Esox_lucius
ENSPNAG00000018173	rbfox3b	87	61.462	ENSFCAG00000002555	RBFOX3	100	63.578	Felis_catus
ENSPNAG00000018173	rbfox3b	85	48.936	ENSFALG00000012288	RBFOX3	85	50.565	Ficedula_albicollis
ENSPNAG00000018173	rbfox3b	85	53.628	ENSFDAG00000007489	RBFOX3	82	80.000	Fukomys_damarensis
ENSPNAG00000018173	rbfox3b	90	78.648	ENSFHEG00000008550	rbfox3b	100	78.648	Fundulus_heteroclitus
ENSPNAG00000018173	rbfox3b	94	77.049	ENSGMOG00000019304	-	77	78.947	Gadus_morhua
ENSPNAG00000018173	rbfox3b	86	70.037	ENSGALG00000032889	RBFOX3	87	65.916	Gallus_gallus
ENSPNAG00000018173	rbfox3b	91	71.333	ENSGAFG00000005025	rbfox3b	88	69.307	Gambusia_affinis
ENSPNAG00000018173	rbfox3b	88	74.576	ENSGACG00000002138	-	79	76.271	Gasterosteus_aculeatus
ENSPNAG00000018173	rbfox3b	85	71.970	ENSGAGG00000020025	RBFOX3	100	64.839	Gopherus_agassizii
ENSPNAG00000018173	rbfox3b	83	72.449	ENSGGOG00000012546	RBFOX3	81	84.314	Gorilla_gorilla
ENSPNAG00000018173	rbfox3b	91	70.418	ENSHBUG00000018099	rbfox3b	85	70.874	Haplochromis_burtoni
ENSPNAG00000018173	rbfox3b	93	64.000	ENSHBUG00000023098	-	93	65.231	Haplochromis_burtoni
ENSPNAG00000018173	rbfox3b	85	58.307	ENSHGLG00000008679	RBFOX3	83	76.923	Heterocephalus_glaber_female
ENSPNAG00000018173	rbfox3b	82	69.231	ENSHGLG00100014739	RBFOX3	81	70.909	Heterocephalus_glaber_male
ENSPNAG00000018173	rbfox3b	86	63.946	ENSHCOG00000007444	RBFOX3	79	61.842	Hippocampus_comes
ENSPNAG00000018173	rbfox3b	93	65.017	ENSHCOG00000001863	RBFOX3	95	65.677	Hippocampus_comes
ENSPNAG00000018173	rbfox3b	85	70.111	ENSIPUG00000012010	rbfox3a	95	65.409	Ictalurus_punctatus
ENSPNAG00000018173	rbfox3b	92	65.138	ENSIPUG00000021966	rbfox3b	100	65.138	Ictalurus_punctatus
ENSPNAG00000018173	rbfox3b	85	57.198	ENSSTOG00000026817	RBFOX3	100	59.353	Ictidomys_tridecemlineatus
ENSPNAG00000018173	rbfox3b	82	72.959	ENSJJAG00000014167	Rbfox3	83	87.234	Jaculus_jaculus
ENSPNAG00000018173	rbfox3b	94	72.115	ENSKMAG00000006726	rbfox3b	87	73.077	Kryptolebias_marmoratus
ENSPNAG00000018173	rbfox3b	85	75.373	ENSLBEG00000022508	-	86	66.242	Labrus_bergylta
ENSPNAG00000018173	rbfox3b	91	74.667	ENSLBEG00000004030	rbfox3b	99	74.667	Labrus_bergylta
ENSPNAG00000018173	rbfox3b	95	55.682	ENSLACG00000018409	-	87	60.933	Latimeria_chalumnae
ENSPNAG00000018173	rbfox3b	86	65.347	ENSLOCG00000012267	rbfox3a	95	67.302	Lepisosteus_oculatus
ENSPNAG00000018173	rbfox3b	77	84.848	ENSLAFG00000016623	RBFOX3	81	80.769	Loxodonta_africana
ENSPNAG00000018173	rbfox3b	82	70.833	ENSMFAG00000002247	RBFOX3	83	87.234	Macaca_fascicularis
ENSPNAG00000018173	rbfox3b	82	72.449	ENSMMUG00000023028	RBFOX3	81	87.234	Macaca_mulatta
ENSPNAG00000018173	rbfox3b	85	61.409	ENSMNEG00000041147	RBFOX3	100	64.744	Macaca_nemestrina
ENSPNAG00000018173	rbfox3b	85	61.745	ENSMLEG00000025686	RBFOX3	100	65.064	Mandrillus_leucophaeus
ENSPNAG00000018173	rbfox3b	91	75.517	ENSMAMG00000019810	rbfox3b	99	75.517	Mastacembelus_armatus
ENSPNAG00000018173	rbfox3b	88	66.667	ENSMAMG00000020600	-	92	65.079	Mastacembelus_armatus
ENSPNAG00000018173	rbfox3b	88	50.000	ENSMZEG00005003055	-	81	50.625	Maylandia_zebra
ENSPNAG00000018173	rbfox3b	91	70.418	ENSMZEG00005000781	rbfox3b	85	71.521	Maylandia_zebra
ENSPNAG00000018173	rbfox3b	54	59.896	ENSMGAG00000005600	RBFOX3	78	60.680	Meleagris_gallopavo
ENSPNAG00000018173	rbfox3b	85	59.048	ENSMAUG00000013543	Rbfox3	83	83.333	Mesocricetus_auratus
ENSPNAG00000018173	rbfox3b	82	87.500	ENSMICG00000014898	RBFOX3	81	87.755	Microcebus_murinus
ENSPNAG00000018173	rbfox3b	76	82.759	ENSMOCG00000015373	Rbfox3	83	81.250	Microtus_ochrogaster
ENSPNAG00000018173	rbfox3b	91	69.836	ENSMMOG00000020193	rbfox3b	85	69.329	Mola_mola
ENSPNAG00000018173	rbfox3b	85	61.616	ENSMODG00000002089	RBFOX3	87	63.987	Monodelphis_domestica
ENSPNAG00000018173	rbfox3b	91	74.000	ENSMALG00000020407	rbfox3b	82	74.333	Monopterus_albus
ENSPNAG00000018173	rbfox3b	91	66.997	ENSMALG00000018270	-	97	66.667	Monopterus_albus
ENSPNAG00000018173	rbfox3b	76	82.759	MGP_CAROLIEiJ_G0017487	Rbfox3	83	81.250	Mus_caroli
ENSPNAG00000018173	rbfox3b	82	85.417	ENSMUSG00000025576	Rbfox3	83	85.417	Mus_musculus
ENSPNAG00000018173	rbfox3b	76	86.207	MGP_PahariEiJ_G0018614	Rbfox3	83	81.633	Mus_pahari
ENSPNAG00000018173	rbfox3b	76	86.207	MGP_SPRETEiJ_G0018331	Rbfox3	83	83.333	Mus_spretus
ENSPNAG00000018173	rbfox3b	87	55.621	ENSMPUG00000012319	RBFOX3	92	58.357	Mustela_putorius_furo
ENSPNAG00000018173	rbfox3b	76	86.207	ENSNGAG00000018006	Rbfox3	83	83.333	Nannospalax_galili
ENSPNAG00000018173	rbfox3b	95	64.379	ENSNBRG00000022885	-	90	64.516	Neolamprologus_brichardi
ENSPNAG00000018173	rbfox3b	90	69.805	ENSNBRG00000010102	rbfox3b	85	70.130	Neolamprologus_brichardi
ENSPNAG00000018173	rbfox3b	54	52.239	ENSNLEG00000000153	-	96	46.000	Nomascus_leucogenys
ENSPNAG00000018173	rbfox3b	85	82.979	ENSMEUG00000004218	-	67	87.234	Notamacropus_eugenii
ENSPNAG00000018173	rbfox3b	54	79.310	ENSOPRG00000016279	-	64	77.083	Ochotona_princeps
ENSPNAG00000018173	rbfox3b	85	64.765	ENSODEG00000009433	RBFOX3	100	64.762	Octodon_degus
ENSPNAG00000018173	rbfox3b	90	65.605	ENSONIG00000007282	-	92	66.879	Oreochromis_niloticus
ENSPNAG00000018173	rbfox3b	90	70.833	ENSONIG00000009549	rbfox3b	97	62.147	Oreochromis_niloticus
ENSPNAG00000018173	rbfox3b	62	50.189	ENSOCUG00000014217	RBFOX3	53	89.130	Oryctolagus_cuniculus
ENSPNAG00000018173	rbfox3b	91	70.701	ENSORLG00000000905	rbfox3b	68	69.968	Oryzias_latipes
ENSPNAG00000018173	rbfox3b	90	78.648	ENSORLG00020018030	rbfox3b	94	78.292	Oryzias_latipes_hni
ENSPNAG00000018173	rbfox3b	91	78.439	ENSORLG00015009200	rbfox3b	99	77.660	Oryzias_latipes_hsok
ENSPNAG00000018173	rbfox3b	70	80.476	ENSOMEG00000014677	rbfox3b	88	75.000	Oryzias_melastigma
ENSPNAG00000018173	rbfox3b	94	58.232	ENSOGAG00000029595	RBFOX3	84	64.217	Otolemur_garnettii
ENSPNAG00000018173	rbfox3b	65	72.449	ENSPPAG00000025383	RBFOX3	99	62.807	Pan_paniscus
ENSPNAG00000018173	rbfox3b	85	57.329	ENSPPRG00000007819	RBFOX3	100	60.681	Panthera_pardus
ENSPNAG00000018173	rbfox3b	83	72.449	ENSPTRG00000009727	RBFOX3	81	84.314	Pan_troglodytes
ENSPNAG00000018173	rbfox3b	85	61.745	ENSPANG00000019837	RBFOX3	100	65.064	Papio_anubis
ENSPNAG00000018173	rbfox3b	91	63.406	ENSPKIG00000022633	-	84	63.043	Paramormyrops_kingsleyae
ENSPNAG00000018173	rbfox3b	87	73.993	ENSPKIG00000010299	rbfox3a	81	75.000	Paramormyrops_kingsleyae
ENSPNAG00000018173	rbfox3b	75	67.954	ENSPMGG00000008000	rbfox3b	79	69.170	Periophthalmus_magnuspinnatus
ENSPNAG00000018173	rbfox3b	76	82.759	ENSPEMG00000010500	Rbfox3	83	81.250	Peromyscus_maniculatus_bairdii
ENSPNAG00000018173	rbfox3b	85	70.677	ENSPCIG00000005766	RBFOX3	100	71.429	Phascolarctos_cinereus
ENSPNAG00000018173	rbfox3b	91	87.500	ENSPFOG00000018294	rbfox3b	75	87.500	Poecilia_formosa
ENSPNAG00000018173	rbfox3b	68	76.339	ENSPLAG00000000481	rbfox3b	71	78.241	Poecilia_latipinna
ENSPNAG00000018173	rbfox3b	90	79.004	ENSPMEG00000022997	rbfox3b	100	79.004	Poecilia_mexicana
ENSPNAG00000018173	rbfox3b	91	70.794	ENSPREG00000012886	rbfox3b	90	70.607	Poecilia_reticulata
ENSPNAG00000018173	rbfox3b	69	56.540	ENSPPYG00000008704	RBFOX3	84	57.193	Pongo_abelii
ENSPNAG00000018173	rbfox3b	76	82.759	ENSPCAG00000001401	RBFOX3	83	81.250	Procavia_capensis
ENSPNAG00000018173	rbfox3b	89	72.857	ENSPCOG00000012689	RBFOX3	83	87.234	Propithecus_coquereli
ENSPNAG00000018173	rbfox3b	76	82.759	ENSPVAG00000015243	RBFOX3	83	79.592	Pteropus_vampyrus
ENSPNAG00000018173	rbfox3b	91	66.890	ENSPNYG00000009079	-	82	67.774	Pundamilia_nyererei
ENSPNAG00000018173	rbfox3b	91	66.555	ENSPNYG00000010414	rbfox3b	84	66.555	Pundamilia_nyererei
ENSPNAG00000018173	rbfox3b	77	81.818	ENSRNOG00000003386	Rbfox3	100	63.608	Rattus_norvegicus
ENSPNAG00000018173	rbfox3b	86	64.460	ENSRBIG00000040449	RBFOX3	87	68.106	Rhinopithecus_bieti
ENSPNAG00000018173	rbfox3b	85	61.745	ENSRROG00000000766	RBFOX3	100	65.064	Rhinopithecus_roxellana
ENSPNAG00000018173	rbfox3b	82	71.939	ENSSBOG00000031591	RBFOX3	83	87.234	Saimiri_boliviensis_boliviensis
ENSPNAG00000018173	rbfox3b	85	70.677	ENSSHAG00000016076	RBFOX3	100	71.429	Sarcophilus_harrisii
ENSPNAG00000018173	rbfox3b	85	73.978	ENSSFOG00015023260	rbfox3a	94	76.056	Scleropages_formosus
ENSPNAG00000018173	rbfox3b	86	63.359	ENSSFOG00015004716	RBFOX3	95	65.343	Scleropages_formosus
ENSPNAG00000018173	rbfox3b	90	70.922	ENSSMAG00000019052	-	94	70.922	Scophthalmus_maximus
ENSPNAG00000018173	rbfox3b	90	74.161	ENSSMAG00000012618	rbfox3b	70	73.154	Scophthalmus_maximus
ENSPNAG00000018173	rbfox3b	90	78.648	ENSSDUG00000023183	rbfox3b	100	78.648	Seriola_dumerili
ENSPNAG00000018173	rbfox3b	88	63.636	ENSSDUG00000015801	-	88	62.821	Seriola_dumerili
ENSPNAG00000018173	rbfox3b	90	70.833	ENSSLDG00000000149	rbfox3b	85	70.833	Seriola_lalandi_dorsalis
ENSPNAG00000018173	rbfox3b	87	68.276	ENSSLDG00000016098	-	89	67.834	Seriola_lalandi_dorsalis
ENSPNAG00000018173	rbfox3b	85	72.075	ENSSPUG00000011733	RBFOX3	99	64.856	Sphenodon_punctatus
ENSPNAG00000018173	rbfox3b	91	69.333	ENSSPAG00000017571	rbfox3b	84	69.333	Stegastes_partitus
ENSPNAG00000018173	rbfox3b	76	61.176	ENSSPAG00000004898	-	85	60.741	Stegastes_partitus
ENSPNAG00000018173	rbfox3b	67	84.848	ENSSSCG00000039498	RBFOX3	75	82.692	Sus_scrofa
ENSPNAG00000018173	rbfox3b	91	68.810	ENSTRUG00000004894	rbfox3b	88	68.810	Takifugu_rubripes
ENSPNAG00000018173	rbfox3b	99	60.705	ENSTNIG00000011278	rbfox3b	88	61.932	Tetraodon_nigroviridis
ENSPNAG00000018173	rbfox3b	82	70.833	ENSTTRG00000003676	RBFOX3	83	87.234	Tursiops_truncatus
ENSPNAG00000018173	rbfox3b	85	62.963	ENSUAMG00000004668	RBFOX3	100	65.287	Ursus_americanus
ENSPNAG00000018173	rbfox3b	82	70.833	ENSVVUG00000017864	RBFOX3	100	65.064	Vulpes_vulpes
ENSPNAG00000018173	rbfox3b	90	49.107	ENSXETG00000020236	rbfox3	85	50.299	Xenopus_tropicalis
ENSPNAG00000018173	rbfox3b	90	72.727	ENSXCOG00000018262	rbfox3b	100	72.727	Xiphophorus_couchianus
ENSPNAG00000018173	rbfox3b	91	74.000	ENSXMAG00000012939	rbfox3b	96	74.000	Xiphophorus_maculatus