EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000018866 (Gene tree)
Gene ID: 108415375
Gene Symbol: -
Alias: -
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 19924 bases
Position: chrKV577257.1:20057-39980
Accession: 108415375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013058	RRM_1	PF00076.22	2.7e-18	1	2
ENSPNAP00000013058	RRM_1	PF00076.22	2.7e-18	2	2
ENSPNAP00000013040	RRM_1	PF00076.22	4.2e-18	1	2
ENSPNAP00000013040	RRM_1	PF00076.22	4.2e-18	2	2
ENSPNAP00000013040	RNase_T	PF00929.24	7e-09	1	1
ENSPNAP00000013058	RNase_T	PF00929.24	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000036764	-	4340	XM_017688412	ENSPNAP00000013058	762 (aa)	XP_017543901	-
ENSPNAT00000020514	-	4230	XM_017688415	ENSPNAP00000013040	728 (aa)	XP_017543904	-

Gene Model

Click here to download ENSPNAG00000018866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000018866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000018866	-	92	36.264	ENSG00000005189	REXO5	97	59.420	Homo_sapiens
ENSPNAG00000018866	-	97	43.199	ENSAPOG00000008514	REXO5	95	43.199	Acanthochromis_polyacanthus
ENSPNAG00000018866	-	92	36.667	ENSAMEG00000006178	REXO5	90	36.923	Ailuropoda_melanoleuca
ENSPNAG00000018866	-	97	45.170	ENSAPEG00000010627	REXO5	97	45.170	Amphiprion_percula
ENSPNAG00000018866	-	81	48.099	ENSATEG00000004682	REXO5	96	50.402	Anabas_testudineus
ENSPNAG00000018866	-	92	36.785	ENSAPLG00000015740	REXO5	97	36.785	Anas_platyrhynchos
ENSPNAG00000018866	-	99	35.613	ENSACAG00000009744	REXO5	97	35.613	Anolis_carolinensis
ENSPNAG00000018866	-	92	35.374	ENSANAG00000034379	REXO5	90	35.616	Aotus_nancymaae
ENSPNAG00000018866	-	79	41.628	ENSACLG00000004778	REXO5	99	41.628	Astatotilapia_calliptera
ENSPNAG00000018866	-	91	36.592	ENSBTAG00000006449	REXO5	88	36.592	Bos_taurus
ENSPNAG00000018866	-	91	36.464	ENSCJAG00000009363	REXO5	90	36.464	Callithrix_jacchus
ENSPNAG00000018866	-	92	37.311	ENSCAFG00000017924	REXO5	97	37.311	Canis_familiaris
ENSPNAG00000018866	-	91	36.134	ENSCAFG00020021846	REXO5	90	36.134	Canis_lupus_dingo
ENSPNAG00000018866	-	91	37.535	ENSCHIG00000022443	REXO5	89	37.535	Capra_hircus
ENSPNAG00000018866	-	90	33.848	ENSCPOG00000008940	REXO5	82	36.058	Cavia_porcellus
ENSPNAG00000018866	-	92	36.115	ENSCCAG00000034936	REXO5	90	36.115	Cebus_capucinus
ENSPNAG00000018866	-	91	36.264	ENSCATG00000044063	REXO5	90	36.264	Cercocebus_atys
ENSPNAG00000018866	-	90	35.521	ENSCLAG00000008033	REXO5	83	35.521	Chinchilla_lanigera
ENSPNAG00000018866	-	92	36.153	ENSCSAG00000007562	REXO5	90	36.401	Chlorocebus_sabaeus
ENSPNAG00000018866	-	98	36.213	ENSCPBG00000019062	REXO5	96	36.213	Chrysemys_picta_bellii
ENSPNAG00000018866	-	92	35.880	ENSCANG00000035776	REXO5	91	35.880	Colobus_angolensis_palliatus
ENSPNAG00000018866	-	91	33.562	ENSCGRG00001016179	-	91	33.562	Cricetulus_griseus_chok1gshd
ENSPNAG00000018866	-	91	33.563	ENSCGRG00000010868	-	82	43.137	Cricetulus_griseus_crigri
ENSPNAG00000018866	-	71	40.823	ENSCSEG00000002060	-	99	40.823	Cynoglossus_semilaevis
ENSPNAG00000018866	-	51	44.246	ENSCVAG00000014887	-	73	44.246	Cyprinodon_variegatus
ENSPNAG00000018866	-	91	36.790	ENSEASG00005007266	REXO5	98	40.919	Equus_asinus_asinus
ENSPNAG00000018866	-	91	36.923	ENSECAG00000018769	REXO5	80	36.923	Equus_caballus
ENSPNAG00000018866	-	77	49.240	ENSEEUG00000003572	REXO5	82	49.240	Erinaceus_europaeus
ENSPNAG00000018866	-	92	37.206	ENSFCAG00000015160	REXO5	90	37.206	Felis_catus
ENSPNAG00000018866	-	92	36.676	ENSFALG00000014026	REXO5	97	36.676	Ficedula_albicollis
ENSPNAG00000018866	-	99	39.409	ENSFHEG00000013388	REXO5	98	39.901	Fundulus_heteroclitus
ENSPNAG00000018866	-	92	37.178	ENSGALG00000002239	REXO5	92	37.178	Gallus_gallus
ENSPNAG00000018866	-	99	39.168	ENSGAFG00000011045	REXO5	96	39.560	Gambusia_affinis
ENSPNAG00000018866	-	53	51.122	ENSGACG00000019507	-	86	51.122	Gasterosteus_aculeatus
ENSPNAG00000018866	-	98	35.815	ENSGAGG00000008242	REXO5	96	35.815	Gopherus_agassizii
ENSPNAG00000018866	-	92	36.264	ENSGGOG00000004539	REXO5	90	36.276	Gorilla_gorilla
ENSPNAG00000018866	-	97	40.300	ENSHBUG00000017976	REXO5	97	40.300	Haplochromis_burtoni
ENSPNAG00000018866	-	86	33.971	ENSHGLG00000012652	REXO5	98	34.118	Heterocephalus_glaber_female
ENSPNAG00000018866	-	91	33.944	ENSHGLG00100013255	REXO5	99	38.043	Heterocephalus_glaber_male
ENSPNAG00000018866	-	71	43.238	ENSHCOG00000008648	REXO5	93	43.194	Hippocampus_comes
ENSPNAG00000018866	-	80	38.898	ENSSTOG00000007071	REXO5	86	38.898	Ictidomys_tridecemlineatus
ENSPNAG00000018866	-	97	33.729	ENSJJAG00000023821	-	96	33.729	Jaculus_jaculus
ENSPNAG00000018866	-	99	40.564	ENSKMAG00000009488	REXO5	98	40.564	Kryptolebias_marmoratus
ENSPNAG00000018866	-	99	41.576	ENSLBEG00000009276	REXO5	98	41.626	Labrus_bergylta
ENSPNAG00000018866	-	79	40.098	ENSLACG00000001758	REXO5	99	40.098	Latimeria_chalumnae
ENSPNAG00000018866	-	91	37.135	ENSLAFG00000006157	REXO5	98	35.696	Loxodonta_africana
ENSPNAG00000018866	-	92	36.016	ENSMFAG00000036613	REXO5	91	36.016	Macaca_fascicularis
ENSPNAG00000018866	-	92	36.016	ENSMMUG00000016748	REXO5	91	36.016	Macaca_mulatta
ENSPNAG00000018866	-	92	36.016	ENSMNEG00000045028	REXO5	91	36.016	Macaca_nemestrina
ENSPNAG00000018866	-	91	36.264	ENSMLEG00000029851	REXO5	90	36.264	Mandrillus_leucophaeus
ENSPNAG00000018866	-	99	43.083	ENSMAMG00000006915	REXO5	95	43.083	Mastacembelus_armatus
ENSPNAG00000018866	-	97	40.175	ENSMZEG00005013657	REXO5	97	40.175	Maylandia_zebra
ENSPNAG00000018866	-	92	37.687	ENSMGAG00000010369	REXO5	97	37.687	Meleagris_gallopavo
ENSPNAG00000018866	-	91	36.960	ENSMICG00000014886	REXO5	90	36.960	Microcebus_murinus
ENSPNAG00000018866	-	61	37.862	ENSMOCG00000010062	-	96	37.862	Microtus_ochrogaster
ENSPNAG00000018866	-	71	40.952	ENSMMOG00000011330	-	92	41.445	Mola_mola
ENSPNAG00000018866	-	99	36.226	ENSMODG00000007059	REXO5	90	36.226	Monodelphis_domestica
ENSPNAG00000018866	-	91	32.823	MGP_CAROLIEiJ_G0030385	-	90	32.823	Mus_caroli
ENSPNAG00000018866	-	91	32.832	ENSMUSG00000030924	Rexo5	96	36.242	Mus_musculus
ENSPNAG00000018866	-	91	33.102	MGP_SPRETEiJ_G0031499	-	90	33.102	Mus_spretus
ENSPNAG00000018866	-	92	37.206	ENSMPUG00000013643	REXO5	90	37.206	Mustela_putorius_furo
ENSPNAG00000018866	-	91	34.022	ENSNGAG00000002025	-	96	38.926	Nannospalax_galili
ENSPNAG00000018866	-	75	40.636	ENSNBRG00000006877	REXO5	88	40.636	Neolamprologus_brichardi
ENSPNAG00000018866	-	92	35.440	ENSNLEG00000012334	REXO5	90	35.440	Nomascus_leucogenys
ENSPNAG00000018866	-	90	35.457	ENSMEUG00000015298	REXO5	96	35.457	Notamacropus_eugenii
ENSPNAG00000018866	-	88	33.333	ENSOPRG00000011398	REXO5	68	33.333	Ochotona_princeps
ENSPNAG00000018866	-	97	40.500	ENSONIG00000000148	REXO5	97	47.007	Oreochromis_niloticus
ENSPNAG00000018866	-	92	38.122	ENSOANG00000014291	REXO5	97	38.122	Ornithorhynchus_anatinus
ENSPNAG00000018866	-	91	37.552	ENSOCUG00000009913	REXO5	89	37.552	Oryctolagus_cuniculus
ENSPNAG00000018866	-	97	41.436	ENSORLG00000009738	REXO5	93	42.819	Oryzias_latipes
ENSPNAG00000018866	-	93	43.142	ENSORLG00020010270	REXO5	93	43.142	Oryzias_latipes_hni
ENSPNAG00000018866	-	93	42.573	ENSORLG00015009678	REXO5	93	42.573	Oryzias_latipes_hsok
ENSPNAG00000018866	-	99	42.749	ENSOMEG00000019491	REXO5	99	42.553	Oryzias_melastigma
ENSPNAG00000018866	-	91	36.262	ENSOGAG00000011564	REXO5	90	36.262	Otolemur_garnettii
ENSPNAG00000018866	-	91	37.535	ENSOARG00000013401	REXO5	91	37.328	Ovis_aries
ENSPNAG00000018866	-	92	36.264	ENSPPAG00000035005	REXO5	90	36.264	Pan_paniscus
ENSPNAG00000018866	-	92	35.704	ENSPPRG00000022345	REXO5	90	35.972	Panthera_pardus
ENSPNAG00000018866	-	92	36.806	ENSPTIG00000012096	REXO5	90	37.068	Panthera_tigris_altaica
ENSPNAG00000018866	-	92	36.264	ENSPTRG00000007851	REXO5	90	36.264	Pan_troglodytes
ENSPNAG00000018866	-	92	36.016	ENSPANG00000006898	REXO5	90	36.264	Papio_anubis
ENSPNAG00000018866	-	99	42.416	ENSPKIG00000014406	REXO5	99	42.416	Paramormyrops_kingsleyae
ENSPNAG00000018866	-	92	36.599	ENSPSIG00000012172	REXO5	91	36.599	Pelodiscus_sinensis
ENSPNAG00000018866	-	89	51.923	ENSPCIG00000029238	-	88	37.396	Phascolarctos_cinereus
ENSPNAG00000018866	-	99	39.423	ENSPFOG00000012767	REXO5	99	39.543	Poecilia_formosa
ENSPNAG00000018866	-	99	39.303	ENSPLAG00000006408	REXO5	99	39.423	Poecilia_latipinna
ENSPNAG00000018866	-	99	39.183	ENSPMEG00000007726	REXO5	99	39.376	Poecilia_mexicana
ENSPNAG00000018866	-	99	39.018	ENSPREG00000000146	REXO5	98	38.718	Poecilia_reticulata
ENSPNAG00000018866	-	92	36.338	ENSPPYG00000007163	REXO5	90	36.338	Pongo_abelii
ENSPNAG00000018866	-	89	35.890	ENSPCAG00000006265	REXO5	97	35.890	Procavia_capensis
ENSPNAG00000018866	-	91	36.123	ENSPCOG00000018775	REXO5	90	36.123	Propithecus_coquereli
ENSPNAG00000018866	-	91	37.483	ENSPVAG00000003293	REXO5	95	37.483	Pteropus_vampyrus
ENSPNAG00000018866	-	95	38.965	ENSPNYG00000006922	REXO5	97	38.965	Pundamilia_nyererei
ENSPNAG00000018866	-	91	32.548	ENSRNOG00000014513	Rexo5	91	33.240	Rattus_norvegicus
ENSPNAG00000018866	-	92	36.212	ENSRBIG00000035163	REXO5	81	36.212	Rhinopithecus_bieti
ENSPNAG00000018866	-	91	36.606	ENSRROG00000034741	REXO5	90	36.606	Rhinopithecus_roxellana
ENSPNAG00000018866	-	91	36.264	ENSSBOG00000029650	REXO5	97	36.858	Saimiri_boliviensis_boliviensis
ENSPNAG00000018866	-	91	39.124	ENSSHAG00000005042	REXO5	90	39.124	Sarcophilus_harrisii
ENSPNAG00000018866	-	98	41.558	ENSSFOG00015007581	REXO5	98	41.558	Scleropages_formosus
ENSPNAG00000018866	-	99	42.266	ENSSMAG00000000709	REXO5	98	42.387	Scophthalmus_maximus
ENSPNAG00000018866	-	97	42.572	ENSSDUG00000014528	REXO5	95	42.574	Seriola_dumerili
ENSPNAG00000018866	-	97	43.500	ENSSLDG00000007641	REXO5	95	43.532	Seriola_lalandi_dorsalis
ENSPNAG00000018866	-	91	36.288	ENSSSCG00000007855	REXO5	90	36.402	Sus_scrofa
ENSPNAG00000018866	-	92	37.346	ENSTGUG00000009219	REXO5	97	37.346	Taeniopygia_guttata
ENSPNAG00000018866	-	99	40.025	ENSTRUG00000015295	-	97	40.025	Takifugu_rubripes
ENSPNAG00000018866	-	69	35.453	ENSTBEG00000008797	REXO5	66	35.453	Tupaia_belangeri
ENSPNAG00000018866	-	98	35.595	ENSTTRG00000016439	REXO5	97	35.558	Tursiops_truncatus
ENSPNAG00000018866	-	87	36.937	ENSUAMG00000017756	REXO5	98	36.937	Ursus_americanus
ENSPNAG00000018866	-	91	32.394	ENSVPAG00000003459	REXO5	90	32.394	Vicugna_pacos
ENSPNAG00000018866	-	92	36.528	ENSVVUG00000023257	REXO5	90	36.783	Vulpes_vulpes
ENSPNAG00000018866	-	93	33.793	ENSXETG00000016735	rexo5	96	33.793	Xenopus_tropicalis
ENSPNAG00000018866	-	79	45.187	ENSXCOG00000015997	REXO5	82	44.744	Xiphophorus_couchianus
ENSPNAG00000018866	-	99	39.632	ENSXMAG00000014770	REXO5	98	39.632	Xiphophorus_maculatus