EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000018887 (Gene tree)
Gene ID: 108427872
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 13172 bases
Position: chrKV575342.1:1884109-1897280
Accession: 108427872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013045	RRM_1	PF00076.22	1.5e-24	1	1
ENSPNAP00000013056	RRM_1	PF00076.22	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020533	-	3483	XM_017698427	ENSPNAP00000013056	517 (aa)	XP_017553916	UPI0008149352
ENSPNAT00000020522	-	3423	XM_017698429	ENSPNAP00000013045	497 (aa)	XP_017553918	UPI0008146389

Gene Model

Click here to download ENSPNAG00000018887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000018887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000018887	cstf2	97	61.873	ENSG00000101811	CSTF2	95	82.629	Homo_sapiens
ENSPNAG00000018887	cstf2	97	65.686	ENSAPOG00000005630	cstf2	96	73.592	Acanthochromis_polyacanthus
ENSPNAG00000018887	cstf2	97	70.252	ENSAMEG00000002082	CSTF2	99	59.235	Ailuropoda_melanoleuca
ENSPNAG00000018887	cstf2	97	71.215	ENSAOCG00000020905	cstf2	96	72.948	Amphiprion_ocellaris
ENSPNAG00000018887	cstf2	97	71.215	ENSAPEG00000006526	cstf2	96	73.010	Amphiprion_percula
ENSPNAG00000018887	cstf2	83	87.259	ENSATEG00000018186	cstf2	96	70.254	Anabas_testudineus
ENSPNAG00000018887	cstf2	95	61.578	ENSAPLG00000007255	CSTF2	98	60.204	Anas_platyrhynchos
ENSPNAG00000018887	cstf2	97	61.706	ENSANAG00000022342	CSTF2	99	60.702	Aotus_nancymaae
ENSPNAG00000018887	cstf2	68	98.438	ENSAMXG00000021477	cstf2	96	98.438	Astyanax_mexicanus
ENSPNAG00000018887	cstf2	97	61.739	ENSBTAG00000003547	CSTF2	99	61.391	Bos_taurus
ENSPNAG00000018887	cstf2	97	62.144	ENSCJAG00000004422	CSTF2	99	61.214	Callithrix_jacchus
ENSPNAG00000018887	cstf2	97	60.764	ENSCAFG00000017551	CSTF2	99	59.722	Canis_familiaris
ENSPNAG00000018887	cstf2	97	60.906	ENSCAFG00020007619	CSTF2	99	59.899	Canis_lupus_dingo
ENSPNAG00000018887	cstf2	97	61.913	ENSCHIG00000016994	CSTF2	99	61.565	Capra_hircus
ENSPNAG00000018887	cstf2	97	62.144	ENSTSYG00000006529	CSTF2	99	61.214	Carlito_syrichta
ENSPNAG00000018887	cstf2	99	61.424	ENSCPOG00000015255	CSTF2	84	91.503	Cavia_porcellus
ENSPNAG00000018887	cstf2	97	62.144	ENSCCAG00000032975	CSTF2	99	61.214	Cebus_capucinus
ENSPNAG00000018887	cstf2	97	62.045	ENSCATG00000022835	CSTF2	99	61.698	Cercocebus_atys
ENSPNAG00000018887	cstf2	97	61.538	ENSCLAG00000001904	CSTF2	85	89.744	Chinchilla_lanigera
ENSPNAG00000018887	cstf2	97	61.833	ENSCSAG00000010360	CSTF2	99	60.702	Chlorocebus_sabaeus
ENSPNAG00000018887	cstf2	99	73.349	ENSCPBG00000014293	CSTF2	92	72.082	Chrysemys_picta_bellii
ENSPNAG00000018887	cstf2	97	62.045	ENSCANG00000030612	CSTF2	99	61.698	Colobus_angolensis_palliatus
ENSPNAG00000018887	cstf2	97	60.554	ENSCGRG00001023023	Cstf2	99	60.997	Cricetulus_griseus_chok1gshd
ENSPNAG00000018887	cstf2	97	62.633	ENSCGRG00000003897	Cstf2	99	63.428	Cricetulus_griseus_crigri
ENSPNAG00000018887	cstf2	97	87.942	ENSDARG00000090788	cstf2	96	98.305	Danio_rerio
ENSPNAG00000018887	cstf2	99	61.880	ENSDORG00000007195	Cstf2	83	92.053	Dipodomys_ordii
ENSPNAG00000018887	cstf2	78	84.000	ENSETEG00000004931	CSTF2	63	84.000	Echinops_telfairi
ENSPNAG00000018887	cstf2	99	61.130	ENSEASG00005001216	CSTF2	99	60.570	Equus_asinus_asinus
ENSPNAG00000018887	cstf2	99	61.130	ENSECAG00000009325	CSTF2	99	60.570	Equus_caballus
ENSPNAG00000018887	cstf2	97	61.242	ENSFCAG00000007000	CSTF2	99	60.235	Felis_catus
ENSPNAG00000018887	cstf2	90	59.929	ENSFALG00000003859	CSTF2	100	59.253	Ficedula_albicollis
ENSPNAG00000018887	cstf2	97	61.765	ENSFDAG00000002416	CSTF2	99	60.727	Fukomys_damarensis
ENSPNAG00000018887	cstf2	97	68.979	ENSFHEG00000017065	cstf2	92	71.713	Fundulus_heteroclitus
ENSPNAG00000018887	cstf2	97	60.947	ENSGMOG00000005145	cstf2	99	70.800	Gadus_morhua
ENSPNAG00000018887	cstf2	99	62.912	ENSGALG00000006760	CSTF2	99	63.241	Gallus_gallus
ENSPNAG00000018887	cstf2	98	70.553	ENSGACG00000017326	cstf2	92	84.082	Gasterosteus_aculeatus
ENSPNAG00000018887	cstf2	99	59.177	ENSGAGG00000006037	CSTF2	92	71.429	Gopherus_agassizii
ENSPNAG00000018887	cstf2	97	62.218	ENSGGOG00000022267	CSTF2	99	61.872	Gorilla_gorilla
ENSPNAG00000018887	cstf2	97	54.466	ENSHGLG00000013455	-	99	52.356	Heterocephalus_glaber_female
ENSPNAG00000018887	cstf2	97	61.419	ENSHGLG00000000659	-	86	88.272	Heterocephalus_glaber_female
ENSPNAG00000018887	cstf2	97	54.816	ENSHGLG00100015391	-	99	52.705	Heterocephalus_glaber_male
ENSPNAG00000018887	cstf2	97	61.419	ENSHGLG00100001130	-	86	88.272	Heterocephalus_glaber_male
ENSPNAG00000018887	cstf2	97	68.269	ENSHCOG00000005157	cstf2	97	69.246	Hippocampus_comes
ENSPNAG00000018887	cstf2	100	90.458	ENSIPUG00000017839	cstf2	98	90.430	Ictalurus_punctatus
ENSPNAG00000018887	cstf2	97	61.955	ENSSTOG00000023445	CSTF2	85	89.744	Ictidomys_tridecemlineatus
ENSPNAG00000018887	cstf2	97	61.179	ENSJJAG00000020507	Cstf2	85	89.744	Jaculus_jaculus
ENSPNAG00000018887	cstf2	50	87.597	ENSKMAG00000001068	cstf2	96	72.549	Kryptolebias_marmoratus
ENSPNAG00000018887	cstf2	98	60.697	ENSLACG00000015927	CSTF2	99	60.067	Latimeria_chalumnae
ENSPNAG00000018887	cstf2	100	76.271	ENSLOCG00000015300	cstf2	93	76.493	Lepisosteus_oculatus
ENSPNAG00000018887	cstf2	99	61.140	ENSLAFG00000000474	CSTF2	99	60.558	Loxodonta_africana
ENSPNAG00000018887	cstf2	97	62.045	ENSMFAG00000043888	CSTF2	99	61.698	Macaca_fascicularis
ENSPNAG00000018887	cstf2	97	62.144	ENSMMUG00000013008	CSTF2	99	61.706	Macaca_mulatta
ENSPNAG00000018887	cstf2	97	62.144	ENSMNEG00000041824	CSTF2	99	61.214	Macaca_nemestrina
ENSPNAG00000018887	cstf2	97	62.045	ENSMLEG00000036870	CSTF2	99	61.698	Mandrillus_leucophaeus
ENSPNAG00000018887	cstf2	95	70.058	ENSMAMG00000020364	cstf2	96	70.881	Mastacembelus_armatus
ENSPNAG00000018887	cstf2	85	86.000	ENSMGAG00000004139	CSTF2	100	60.560	Meleagris_gallopavo
ENSPNAG00000018887	cstf2	97	60.276	ENSMAUG00000000965	Cstf2	99	60.549	Mesocricetus_auratus
ENSPNAG00000018887	cstf2	97	62.982	ENSMICG00000014121	CSTF2	99	62.647	Microcebus_murinus
ENSPNAG00000018887	cstf2	97	60.554	ENSMOCG00000008081	Cstf2	99	61.592	Microtus_ochrogaster
ENSPNAG00000018887	cstf2	98	63.599	ENSMMOG00000000538	cstf2	96	61.079	Mola_mola
ENSPNAG00000018887	cstf2	99	62.185	ENSMODG00000011785	CSTF2	99	63.220	Monodelphis_domestica
ENSPNAG00000018887	cstf2	97	60.449	MGP_CAROLIEiJ_G0033383	Cstf2	84	90.968	Mus_caroli
ENSPNAG00000018887	cstf2	97	60.449	ENSMUSG00000031256	Cstf2	84	90.968	Mus_musculus
ENSPNAG00000018887	cstf2	97	61.765	MGP_PahariEiJ_G0031923	Cstf2	99	61.765	Mus_pahari
ENSPNAG00000018887	cstf2	97	60.794	MGP_SPRETEiJ_G0034548	Cstf2	84	90.968	Mus_spretus
ENSPNAG00000018887	cstf2	97	56.439	ENSMPUG00000002339	CSTF2	99	56.439	Mustela_putorius_furo
ENSPNAG00000018887	cstf2	97	58.147	ENSMLUG00000004598	CSTF2	97	57.188	Myotis_lucifugus
ENSPNAG00000018887	cstf2	97	61.592	ENSNGAG00000021985	Cstf2	99	61.592	Nannospalax_galili
ENSPNAG00000018887	cstf2	94	67.729	ENSNBRG00000021694	cstf2	100	71.713	Neolamprologus_brichardi
ENSPNAG00000018887	cstf2	97	62.045	ENSNLEG00000007510	CSTF2	99	61.698	Nomascus_leucogenys
ENSPNAG00000018887	cstf2	99	63.345	ENSMEUG00000007875	-	73	73.058	Notamacropus_eugenii
ENSPNAG00000018887	cstf2	99	64.821	ENSMEUG00000011186	-	99	64.260	Notamacropus_eugenii
ENSPNAG00000018887	cstf2	71	71.467	ENSMEUG00000014025	-	100	62.353	Notamacropus_eugenii
ENSPNAG00000018887	cstf2	97	62.111	ENSODEG00000002059	CSTF2	99	60.622	Octodon_degus
ENSPNAG00000018887	cstf2	87	67.131	ENSONIG00000002631	cstf2	99	60.932	Oreochromis_niloticus
ENSPNAG00000018887	cstf2	89	86.000	ENSOANG00000004208	CSTF2	71	86.000	Ornithorhynchus_anatinus
ENSPNAG00000018887	cstf2	97	62.630	ENSOCUG00000010468	CSTF2	91	72.010	Oryctolagus_cuniculus
ENSPNAG00000018887	cstf2	97	67.669	ENSORLG00000001380	cstf2	96	69.844	Oryzias_latipes
ENSPNAG00000018887	cstf2	97	67.669	ENSORLG00020021917	cstf2	96	69.844	Oryzias_latipes_hni
ENSPNAG00000018887	cstf2	97	67.669	ENSORLG00015011996	cstf2	96	69.844	Oryzias_latipes_hsok
ENSPNAG00000018887	cstf2	97	69.549	ENSOMEG00000015507	cstf2	96	71.984	Oryzias_melastigma
ENSPNAG00000018887	cstf2	97	56.894	ENSOGAG00000011192	CSTF2	99	57.234	Otolemur_garnettii
ENSPNAG00000018887	cstf2	97	61.913	ENSOARG00000001022	CSTF2	99	61.565	Ovis_aries
ENSPNAG00000018887	cstf2	97	62.218	ENSPPAG00000031804	CSTF2	99	61.872	Pan_paniscus
ENSPNAG00000018887	cstf2	97	61.242	ENSPPRG00000022492	CSTF2	99	60.235	Panthera_pardus
ENSPNAG00000018887	cstf2	97	60.906	ENSPTIG00000009922	CSTF2	99	59.899	Panthera_tigris_altaica
ENSPNAG00000018887	cstf2	97	62.218	ENSPTRG00000022090	CSTF2	99	61.872	Pan_troglodytes
ENSPNAG00000018887	cstf2	97	62.045	ENSPANG00000002303	CSTF2	99	61.698	Papio_anubis
ENSPNAG00000018887	cstf2	100	78.664	ENSPKIG00000005033	cstf2	93	79.127	Paramormyrops_kingsleyae
ENSPNAG00000018887	cstf2	97	73.157	ENSPMGG00000006534	cstf2	96	73.674	Periophthalmus_magnuspinnatus
ENSPNAG00000018887	cstf2	97	60.276	ENSPEMG00000019415	Cstf2	99	60.276	Peromyscus_maniculatus_bairdii
ENSPNAG00000018887	cstf2	95	70.952	ENSPCIG00000002989	CSTF2	99	62.901	Phascolarctos_cinereus
ENSPNAG00000018887	cstf2	97	61.706	ENSPPYG00000020541	CSTF2	99	60.702	Pongo_abelii
ENSPNAG00000018887	cstf2	99	61.857	ENSPCOG00000027744	CSTF2	99	61.977	Propithecus_coquereli
ENSPNAG00000018887	cstf2	95	48.043	ENSPVAG00000008342	CSTF2	100	46.975	Pteropus_vampyrus
ENSPNAG00000018887	cstf2	97	60.900	ENSRNOG00000048025	Cstf2	99	61.938	Rattus_norvegicus
ENSPNAG00000018887	cstf2	97	62.674	ENSRBIG00000030745	CSTF2	99	62.195	Rhinopithecus_bieti
ENSPNAG00000018887	cstf2	97	62.045	ENSRROG00000045042	CSTF2	99	61.698	Rhinopithecus_roxellana
ENSPNAG00000018887	cstf2	97	62.144	ENSSBOG00000021649	CSTF2	99	61.214	Saimiri_boliviensis_boliviensis
ENSPNAG00000018887	cstf2	91	84.000	ENSSHAG00000003681	CSTF2	92	63.475	Sarcophilus_harrisii
ENSPNAG00000018887	cstf2	98	75.881	ENSSFOG00015006348	cstf2	98	78.839	Scleropages_formosus
ENSPNAG00000018887	cstf2	97	68.985	ENSSMAG00000013463	cstf2	96	71.751	Scophthalmus_maximus
ENSPNAG00000018887	cstf2	99	61.272	ENSSPUG00000005288	-	99	63.960	Sphenodon_punctatus
ENSPNAG00000018887	cstf2	97	61.849	ENSSSCG00000012486	CSTF2	99	61.513	Sus_scrofa
ENSPNAG00000018887	cstf2	99	61.252	ENSTGUG00000002253	CSTF2	92	71.496	Taeniopygia_guttata
ENSPNAG00000018887	cstf2	97	72.846	ENSTNIG00000016860	cstf2	99	71.536	Tetraodon_nigroviridis
ENSPNAG00000018887	cstf2	97	61.632	ENSTTRG00000013556	CSTF2	99	60.590	Tursiops_truncatus
ENSPNAG00000018887	cstf2	97	59.235	ENSUAMG00000026605	CSTF2	94	65.880	Ursus_americanus
ENSPNAG00000018887	cstf2	97	65.000	ENSUMAG00000012417	CSTF2	97	76.325	Ursus_maritimus
ENSPNAG00000018887	cstf2	76	74.107	ENSVPAG00000006466	CSTF2	66	74.107	Vicugna_pacos
ENSPNAG00000018887	cstf2	97	60.764	ENSVVUG00000004717	CSTF2	99	59.722	Vulpes_vulpes
ENSPNAG00000018887	cstf2	93	88.000	ENSXETG00000009642	cstf2	82	88.000	Xenopus_tropicalis
ENSPNAG00000018887	cstf2	66	96.970	ENSXCOG00000016436	cstf2	92	96.970	Xiphophorus_couchianus
ENSPNAG00000018887	cstf2	69	72.829	ENSXMAG00000013524	cstf2	96	63.684	Xiphophorus_maculatus