EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000018905 (Gene tree)
Gene ID: 108415374
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 18762 bases
Position: chrKV577257.1:1131-19892
Accession: 108415374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013062	RNA_bind	PF08675.11	2e-33	1	1
ENSPNAP00000031522	RNA_bind	PF08675.11	2e-33	1	1
ENSPNAP00000013062	CAF1	PF04857.20	5.9e-76	1	1
ENSPNAP00000031522	CAF1	PF04857.20	5.9e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020563	-	3480	XM_017688411	ENSPNAP00000031522	603 (aa)	XP_017543900	-
ENSPNAT00000020550	-	3125	-	ENSPNAP00000013062	603 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000018905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000018905's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000018905	parn	86	73.371	ENSG00000140694	PARN	99	69.231	Homo_sapiens
ENSPNAG00000018905	parn	84	73.774	ENSAMEG00000011208	PARN	83	73.774	Ailuropoda_melanoleuca
ENSPNAG00000018905	parn	80	78.571	ENSACIG00000000619	parn	92	70.539	Amphilophus_citrinellus
ENSPNAG00000018905	parn	100	71.118	ENSAOCG00000003465	parn	93	71.118	Amphiprion_ocellaris
ENSPNAG00000018905	parn	78	84.421	ENSAPEG00000010661	parn	91	84.421	Amphiprion_percula
ENSPNAG00000018905	parn	100	71.851	ENSATEG00000004661	parn	93	71.851	Anabas_testudineus
ENSPNAG00000018905	parn	85	71.857	ENSAPLG00000013914	PARN	84	72.233	Anas_platyrhynchos
ENSPNAG00000018905	parn	100	65.231	ENSACAG00000004973	PARN	93	65.391	Anolis_carolinensis
ENSPNAG00000018905	parn	86	72.998	ENSANAG00000031516	PARN	84	72.998	Aotus_nancymaae
ENSPNAG00000018905	parn	100	72.370	ENSACLG00000004742	parn	93	72.370	Astatotilapia_calliptera
ENSPNAG00000018905	parn	100	89.604	ENSAMXG00000012390	parn	93	89.604	Astyanax_mexicanus
ENSPNAG00000018905	parn	82	74.414	ENSBTAG00000018097	PARN	89	74.414	Bos_taurus
ENSPNAG00000018905	parn	86	73.557	ENSCJAG00000015866	PARN	84	73.557	Callithrix_jacchus
ENSPNAG00000018905	parn	84	73.764	ENSCAFG00000018795	PARN	82	73.764	Canis_familiaris
ENSPNAG00000018905	parn	84	73.574	ENSCAFG00020024126	PARN	82	73.574	Canis_lupus_dingo
ENSPNAG00000018905	parn	84	74.573	ENSCHIG00000018143	PARN	83	74.573	Capra_hircus
ENSPNAG00000018905	parn	70	49.885	ENSCAPG00000007984	PARN	69	49.885	Cavia_aperea
ENSPNAG00000018905	parn	83	75.150	ENSCPOG00000002263	PARN	78	75.150	Cavia_porcellus
ENSPNAG00000018905	parn	86	73.557	ENSCCAG00000030367	PARN	84	73.557	Cebus_capucinus
ENSPNAG00000018905	parn	84	75.296	ENSCATG00000041368	PARN	91	75.296	Cercocebus_atys
ENSPNAG00000018905	parn	83	76.353	ENSCLAG00000015406	PARN	78	76.353	Chinchilla_lanigera
ENSPNAG00000018905	parn	86	73.743	ENSCSAG00000008142	PARN	84	73.743	Chlorocebus_sabaeus
ENSPNAG00000018905	parn	84	56.357	ENSCHOG00000007014	PARN	94	50.722	Choloepus_hoffmanni
ENSPNAG00000018905	parn	83	72.780	ENSCPBG00000006609	PARN	89	73.077	Chrysemys_picta_bellii
ENSPNAG00000018905	parn	77	42.387	ENSCING00000010142	-	91	42.387	Ciona_intestinalis
ENSPNAG00000018905	parn	86	61.273	ENSCANG00000028849	-	84	61.273	Colobus_angolensis_palliatus
ENSPNAG00000018905	parn	85	72.106	ENSCGRG00001012096	Parn	83	72.106	Cricetulus_griseus_chok1gshd
ENSPNAG00000018905	parn	85	72.106	ENSCGRG00000004939	Parn	83	72.106	Cricetulus_griseus_crigri
ENSPNAG00000018905	parn	100	69.362	ENSCSEG00000002064	parn	93	69.362	Cynoglossus_semilaevis
ENSPNAG00000018905	parn	100	69.735	ENSCVAG00000014848	parn	93	69.735	Cyprinodon_variegatus
ENSPNAG00000018905	parn	100	74.309	ENSDARG00000102634	parn	93	74.309	Danio_rerio
ENSPNAG00000018905	parn	84	73.814	ENSDNOG00000000833	PARN	88	76.660	Dasypus_novemcinctus
ENSPNAG00000018905	parn	62	73.272	ENSETEG00000014828	-	60	73.913	Echinops_telfairi
ENSPNAG00000018905	parn	84	74.194	ENSEASG00005011400	PARN	83	74.194	Equus_asinus_asinus
ENSPNAG00000018905	parn	84	74.004	ENSECAG00000017792	PARN	83	74.004	Equus_caballus
ENSPNAG00000018905	parn	69	61.714	ENSEEUG00000010370	PARN	69	61.714	Erinaceus_europaeus
ENSPNAG00000018905	parn	100	71.160	ENSELUG00000013139	parn	84	71.317	Esox_lucius
ENSPNAG00000018905	parn	84	74.715	ENSFCAG00000044961	PARN	82	74.715	Felis_catus
ENSPNAG00000018905	parn	100	64.583	ENSFALG00000003911	PARN	92	64.904	Ficedula_albicollis
ENSPNAG00000018905	parn	83	74.950	ENSFDAG00000009234	PARN	82	71.845	Fukomys_damarensis
ENSPNAG00000018905	parn	90	69.162	ENSFHEG00000013738	parn	86	69.162	Fundulus_heteroclitus
ENSPNAG00000018905	parn	80	81.020	ENSGMOG00000003231	parn	89	81.020	Gadus_morhua
ENSPNAG00000018905	parn	89	67.770	ENSGALG00000003091	PARN	90	68.118	Gallus_gallus
ENSPNAG00000018905	parn	100	69.984	ENSGAFG00000011061	parn	93	69.984	Gambusia_affinis
ENSPNAG00000018905	parn	100	70.081	ENSGACG00000019501	parn	93	69.919	Gasterosteus_aculeatus
ENSPNAG00000018905	parn	86	72.998	ENSGGOG00000025224	PARN	86	72.998	Gorilla_gorilla
ENSPNAG00000018905	parn	100	72.144	ENSHBUG00000017906	parn	93	72.144	Haplochromis_burtoni
ENSPNAG00000018905	parn	83	74.950	ENSHGLG00000010886	PARN	78	74.950	Heterocephalus_glaber_female
ENSPNAG00000018905	parn	83	74.950	ENSHGLG00100014659	PARN	78	74.950	Heterocephalus_glaber_male
ENSPNAG00000018905	parn	80	77.755	ENSHCOG00000008683	parn	84	77.755	Hippocampus_comes
ENSPNAG00000018905	parn	100	70.455	ENSIPUG00000012401	parn	92	70.665	Ictalurus_punctatus
ENSPNAG00000018905	parn	86	71.429	ENSSTOG00000007519	PARN	85	71.429	Ictidomys_tridecemlineatus
ENSPNAG00000018905	parn	85	72.467	ENSJJAG00000023049	Parn	84	72.467	Jaculus_jaculus
ENSPNAG00000018905	parn	100	70.394	ENSKMAG00000009462	parn	93	70.394	Kryptolebias_marmoratus
ENSPNAG00000018905	parn	94	75.340	ENSLBEG00000009167	parn	92	75.340	Labrus_bergylta
ENSPNAG00000018905	parn	76	76.623	ENSLACG00000004207	PARN	88	76.819	Latimeria_chalumnae
ENSPNAG00000018905	parn	100	67.913	ENSLOCG00000000715	parn	93	67.812	Lepisosteus_oculatus
ENSPNAG00000018905	parn	84	74.138	ENSLAFG00000015036	PARN	83	74.138	Loxodonta_africana
ENSPNAG00000018905	parn	83	73.180	ENSMFAG00000044852	PARN	90	73.180	Macaca_fascicularis
ENSPNAG00000018905	parn	86	73.557	ENSMMUG00000018849	PARN	84	73.557	Macaca_mulatta
ENSPNAG00000018905	parn	86	73.557	ENSMNEG00000045108	PARN	84	73.557	Macaca_nemestrina
ENSPNAG00000018905	parn	86	73.371	ENSMLEG00000031743	PARN	90	73.180	Mandrillus_leucophaeus
ENSPNAG00000018905	parn	100	71.163	ENSMAMG00000006939	parn	93	71.451	Mastacembelus_armatus
ENSPNAG00000018905	parn	98	74.834	ENSMZEG00005013590	parn	93	72.370	Maylandia_zebra
ENSPNAG00000018905	parn	85	72.045	ENSMGAG00000001004	PARN	84	72.045	Meleagris_gallopavo
ENSPNAG00000018905	parn	82	70.291	ENSMAUG00000008025	Parn	83	70.291	Mesocricetus_auratus
ENSPNAG00000018905	parn	86	72.998	ENSMICG00000016053	PARN	84	72.998	Microcebus_murinus
ENSPNAG00000018905	parn	74	77.679	ENSMOCG00000022211	Parn	91	77.679	Microtus_ochrogaster
ENSPNAG00000018905	parn	100	68.863	ENSMMOG00000011333	parn	92	68.863	Mola_mola
ENSPNAG00000018905	parn	74	80.000	ENSMODG00000004915	PARN	90	80.000	Monodelphis_domestica
ENSPNAG00000018905	parn	100	70.833	ENSMALG00000019426	parn	85	82.800	Monopterus_albus
ENSPNAG00000018905	parn	84	72.780	MGP_CAROLIEiJ_G0020466	Parn	82	72.780	Mus_caroli
ENSPNAG00000018905	parn	84	72.973	ENSMUSG00000022685	Parn	82	72.973	Mus_musculus
ENSPNAG00000018905	parn	85	71.619	MGP_PahariEiJ_G0016172	Parn	83	71.619	Mus_pahari
ENSPNAG00000018905	parn	84	72.587	MGP_SPRETEiJ_G0021361	Parn	82	72.587	Mus_spretus
ENSPNAG00000018905	parn	84	73.574	ENSMPUG00000014464	PARN	82	73.574	Mustela_putorius_furo
ENSPNAG00000018905	parn	74	78.795	ENSMLUG00000005414	PARN	91	78.795	Myotis_lucifugus
ENSPNAG00000018905	parn	81	81.010	ENSNBRG00000006805	parn	84	81.010	Neolamprologus_brichardi
ENSPNAG00000018905	parn	86	73.743	ENSNLEG00000010241	PARN	84	73.743	Nomascus_leucogenys
ENSPNAG00000018905	parn	80	53.814	ENSMEUG00000008178	-	77	53.814	Notamacropus_eugenii
ENSPNAG00000018905	parn	100	60.480	ENSOPRG00000012187	PARN	94	60.480	Ochotona_princeps
ENSPNAG00000018905	parn	85	67.437	ENSODEG00000001617	PARN	83	67.437	Octodon_degus
ENSPNAG00000018905	parn	100	72.613	ENSONIG00000000151	parn	93	72.613	Oreochromis_niloticus
ENSPNAG00000018905	parn	65	60.636	ENSOANG00000020155	-	96	61.220	Ornithorhynchus_anatinus
ENSPNAG00000018905	parn	86	72.575	ENSOCUG00000000322	PARN	93	65.528	Oryctolagus_cuniculus
ENSPNAG00000018905	parn	100	69.231	ENSORLG00020010313	parn	93	69.231	Oryzias_latipes_hni
ENSPNAG00000018905	parn	100	69.074	ENSORLG00015000300	parn	93	69.074	Oryzias_latipes_hsok
ENSPNAG00000018905	parn	100	68.652	ENSOMEG00000019555	parn	93	68.652	Oryzias_melastigma
ENSPNAG00000018905	parn	74	76.615	ENSOGAG00000014626	PARN	91	76.615	Otolemur_garnettii
ENSPNAG00000018905	parn	74	79.464	ENSOARG00000007574	PARN	91	79.464	Ovis_aries
ENSPNAG00000018905	parn	86	73.371	ENSPPAG00000031438	PARN	84	73.371	Pan_paniscus
ENSPNAG00000018905	parn	84	74.715	ENSPPRG00000018583	PARN	82	74.715	Panthera_pardus
ENSPNAG00000018905	parn	84	74.715	ENSPTIG00000012135	PARN	82	74.715	Panthera_tigris_altaica
ENSPNAG00000018905	parn	86	73.371	ENSPTRG00000007792	PARN	84	73.371	Pan_troglodytes
ENSPNAG00000018905	parn	86	70.950	ENSPANG00000020099	PARN	84	70.950	Papio_anubis
ENSPNAG00000018905	parn	99	68.203	ENSPKIG00000022807	parn	90	68.664	Paramormyrops_kingsleyae
ENSPNAG00000018905	parn	85	72.795	ENSPSIG00000014804	PARN	90	72.587	Pelodiscus_sinensis
ENSPNAG00000018905	parn	88	74.406	ENSPMGG00000014431	parn	76	74.589	Periophthalmus_magnuspinnatus
ENSPNAG00000018905	parn	86	69.720	ENSPEMG00000018439	Parn	85	69.720	Peromyscus_maniculatus_bairdii
ENSPNAG00000018905	parn	79	67.432	ENSPMAG00000003956	parn	92	67.432	Petromyzon_marinus
ENSPNAG00000018905	parn	62	69.816	ENSPCIG00000001259	PARN	81	69.554	Phascolarctos_cinereus
ENSPNAG00000018905	parn	100	69.315	ENSPFOG00000012823	parn	93	69.315	Poecilia_formosa
ENSPNAG00000018905	parn	100	69.626	ENSPLAG00000006395	parn	93	69.626	Poecilia_latipinna
ENSPNAG00000018905	parn	100	69.470	ENSPMEG00000007711	parn	93	69.626	Poecilia_mexicana
ENSPNAG00000018905	parn	100	69.626	ENSPREG00000000147	parn	93	69.782	Poecilia_reticulata
ENSPNAG00000018905	parn	86	72.913	ENSPPYG00000007123	PARN	84	72.913	Pongo_abelii
ENSPNAG00000018905	parn	84	63.516	ENSPCAG00000001741	PARN	98	56.340	Procavia_capensis
ENSPNAG00000018905	parn	84	70.699	ENSPCOG00000019292	PARN	83	70.699	Propithecus_coquereli
ENSPNAG00000018905	parn	84	69.639	ENSPVAG00000002547	PARN	83	68.691	Pteropus_vampyrus
ENSPNAG00000018905	parn	100	72.484	ENSPNYG00000006835	parn	93	72.484	Pundamilia_nyererei
ENSPNAG00000018905	parn	84	72.973	ENSRNOG00000002912	Parn	96	79.381	Rattus_norvegicus
ENSPNAG00000018905	parn	70	30.159	ENSRNOG00000023140	Pnldc1	84	31.915	Rattus_norvegicus
ENSPNAG00000018905	parn	86	71.881	ENSSBOG00000034726	PARN	84	71.881	Saimiri_boliviensis_boliviensis
ENSPNAG00000018905	parn	62	77.454	ENSSHAG00000008493	PARN	84	77.454	Sarcophilus_harrisii
ENSPNAG00000018905	parn	100	70.015	ENSSFOG00015014165	parn	90	73.897	Scleropages_formosus
ENSPNAG00000018905	parn	93	74.655	ENSSMAG00000000685	parn	93	68.702	Scophthalmus_maximus
ENSPNAG00000018905	parn	100	72.826	ENSSDUG00000014555	parn	93	73.292	Seriola_dumerili
ENSPNAG00000018905	parn	72	79.493	ENSSARG00000014339	PARN	75	79.493	Sorex_araneus
ENSPNAG00000018905	parn	85	73.358	ENSSPUG00000007719	PARN	84	73.358	Sphenodon_punctatus
ENSPNAG00000018905	parn	100	71.607	ENSSPAG00000007095	parn	93	71.763	Stegastes_partitus
ENSPNAG00000018905	parn	84	73.913	ENSSSCG00000007878	PARN	74	73.913	Sus_scrofa
ENSPNAG00000018905	parn	85	71.857	ENSTGUG00000004971	PARN	84	72.233	Taeniopygia_guttata
ENSPNAG00000018905	parn	58	30.362	ENSTGUG00000011418	PNLDC1	68	30.084	Taeniopygia_guttata
ENSPNAG00000018905	parn	100	71.359	ENSTNIG00000008252	parn	93	71.521	Tetraodon_nigroviridis
ENSPNAG00000018905	parn	84	62.023	ENSTBEG00000010407	PARN	90	62.023	Tupaia_belangeri
ENSPNAG00000018905	parn	84	70.019	ENSTTRG00000002843	PARN	83	70.019	Tursiops_truncatus
ENSPNAG00000018905	parn	79	65.481	ENSUAMG00000008283	PARN	98	65.481	Ursus_americanus
ENSPNAG00000018905	parn	84	74.102	ENSUMAG00000004527	PARN	83	74.102	Ursus_maritimus
ENSPNAG00000018905	parn	84	71.347	ENSVPAG00000008968	PARN	86	71.078	Vicugna_pacos
ENSPNAG00000018905	parn	84	73.954	ENSVVUG00000019509	PARN	82	73.954	Vulpes_vulpes
ENSPNAG00000018905	parn	85	70.301	ENSXETG00000010994	parn	91	75.157	Xenopus_tropicalis
ENSPNAG00000018905	parn	88	72.578	ENSXCOG00000015990	parn	92	72.578	Xiphophorus_couchianus
ENSPNAG00000018905	parn	100	69.484	ENSXMAG00000014783	parn	93	70.110	Xiphophorus_maculatus