EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000018956 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-385f13.3
Alias: -
Full Name: uncharacterized LOC108428389
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2108 bases
Position: chrKV575347.1:157410-159517
Accession: 108428389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013117	RNase_T	PF00929.24	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020610	-	546	XM_017699340	ENSPNAP00000013117	181 (aa)	XP_017554829	-

Gene Model

Click here to download ENSPNAG00000018956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000018956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000018956	si:ch1073-385f13.3	91	45.930	ENSAOCG00000011593	si:ch1073-296i8.2	62	45.930	Amphiprion_ocellaris
ENSPNAG00000018956	si:ch1073-385f13.3	91	46.512	ENSAPEG00000012492	si:ch1073-296i8.2	61	46.512	Amphiprion_percula
ENSPNAG00000018956	si:ch1073-385f13.3	100	47.619	ENSATEG00000021547	si:ch1073-296i8.2	74	47.619	Anabas_testudineus
ENSPNAG00000018956	si:ch1073-385f13.3	97	51.366	ENSATEG00000021542	si:ch1073-385f13.3	94	51.366	Anabas_testudineus
ENSPNAG00000018956	si:ch1073-385f13.3	94	54.857	ENSACLG00000023991	-	54	54.857	Astatotilapia_calliptera
ENSPNAG00000018956	si:ch1073-385f13.3	97	49.180	ENSCVAG00000001533	-	93	49.180	Cyprinodon_variegatus
ENSPNAG00000018956	si:ch1073-385f13.3	98	51.351	ENSDARG00000093773	si:ch1073-296i8.2	79	51.351	Danio_rerio
ENSPNAG00000018956	si:ch1073-385f13.3	100	63.158	ENSDARG00000092584	si:ch1073-385f13.3	78	63.158	Danio_rerio
ENSPNAG00000018956	si:ch1073-385f13.3	98	45.946	ENSFHEG00000018188	si:ch1073-296i8.2	75	45.946	Fundulus_heteroclitus
ENSPNAG00000018956	si:ch1073-385f13.3	92	50.000	ENSFHEG00000018181	-	88	50.000	Fundulus_heteroclitus
ENSPNAG00000018956	si:ch1073-385f13.3	93	45.143	ENSGMOG00000019335	si:ch1073-296i8.2	99	45.143	Gadus_morhua
ENSPNAG00000018956	si:ch1073-385f13.3	99	47.059	ENSGMOG00000019565	-	99	47.059	Gadus_morhua
ENSPNAG00000018956	si:ch1073-385f13.3	94	48.588	ENSGACG00000007185	si:ch1073-296i8.2	98	48.588	Gasterosteus_aculeatus
ENSPNAG00000018956	si:ch1073-385f13.3	94	57.955	ENSHBUG00000007541	si:ch1073-385f13.3	90	57.955	Haplochromis_burtoni
ENSPNAG00000018956	si:ch1073-385f13.3	98	48.108	ENSHCOG00000008574	si:ch1073-296i8.2	78	48.108	Hippocampus_comes
ENSPNAG00000018956	si:ch1073-385f13.3	96	51.667	ENSKMAG00000015669	-	91	51.667	Kryptolebias_marmoratus
ENSPNAG00000018956	si:ch1073-385f13.3	98	47.568	ENSKMAG00000015660	si:ch1073-296i8.2	83	47.568	Kryptolebias_marmoratus
ENSPNAG00000018956	si:ch1073-385f13.3	93	46.703	ENSLBEG00000019623	si:ch1073-296i8.2	69	46.703	Labrus_bergylta
ENSPNAG00000018956	si:ch1073-385f13.3	99	57.447	ENSLOCG00000014933	-	94	57.447	Lepisosteus_oculatus
ENSPNAG00000018956	si:ch1073-385f13.3	97	53.005	ENSMAMG00000023075	si:ch1073-385f13.3	94	53.005	Mastacembelus_armatus
ENSPNAG00000018956	si:ch1073-385f13.3	76	46.528	ENSMMOG00000018979	si:ch1073-296i8.2	68	46.528	Mola_mola
ENSPNAG00000018956	si:ch1073-385f13.3	97	53.552	ENSMALG00000015952	si:ch1073-385f13.3	94	53.552	Monopterus_albus
ENSPNAG00000018956	si:ch1073-385f13.3	94	56.250	ENSONIG00000012794	si:ch1073-385f13.3	90	56.250	Oreochromis_niloticus
ENSPNAG00000018956	si:ch1073-385f13.3	97	49.180	ENSORLG00000030645	si:ch1073-385f13.3	83	49.180	Oryzias_latipes
ENSPNAG00000018956	si:ch1073-385f13.3	98	47.568	ENSORLG00000023958	si:ch1073-296i8.2	84	47.568	Oryzias_latipes
ENSPNAG00000018956	si:ch1073-385f13.3	98	48.108	ENSORLG00020021912	si:ch1073-296i8.2	84	48.108	Oryzias_latipes_hni
ENSPNAG00000018956	si:ch1073-385f13.3	97	49.727	ENSORLG00020021903	-	93	49.727	Oryzias_latipes_hni
ENSPNAG00000018956	si:ch1073-385f13.3	98	48.108	ENSORLG00015015303	si:ch1073-296i8.2	84	48.108	Oryzias_latipes_hsok
ENSPNAG00000018956	si:ch1073-385f13.3	97	52.174	ENSPKIG00000023552	-	86	52.174	Paramormyrops_kingsleyae
ENSPNAG00000018956	si:ch1073-385f13.3	92	47.701	ENSPFOG00000005521	si:ch1073-385f13.3	89	47.701	Poecilia_formosa
ENSPNAG00000018956	si:ch1073-385f13.3	98	52.151	ENSPFOG00000021742	-	98	52.151	Poecilia_formosa
ENSPNAG00000018956	si:ch1073-385f13.3	92	53.448	ENSPMEG00000013087	si:ch1073-385f13.3	91	53.448	Poecilia_mexicana
ENSPNAG00000018956	si:ch1073-385f13.3	92	47.701	ENSPMEG00000013096	si:ch1073-385f13.3	88	47.701	Poecilia_mexicana
ENSPNAG00000018956	si:ch1073-385f13.3	92	46.766	ENSPREG00000013537	-	76	46.766	Poecilia_reticulata
ENSPNAG00000018956	si:ch1073-385f13.3	98	49.730	ENSSMAG00000004874	si:ch1073-296i8.2	71	49.730	Scophthalmus_maximus
ENSPNAG00000018956	si:ch1073-385f13.3	99	53.763	ENSSLDG00000002379	si:ch1073-385f13.3	94	53.763	Seriola_lalandi_dorsalis
ENSPNAG00000018956	si:ch1073-385f13.3	97	50.273	ENSSPAG00000012797	si:ch1073-296i8.2	95	49.462	Stegastes_partitus
ENSPNAG00000018956	si:ch1073-385f13.3	98	47.568	ENSTNIG00000010399	si:ch1073-296i8.2	81	47.568	Tetraodon_nigroviridis
ENSPNAG00000018956	si:ch1073-385f13.3	97	48.634	ENSXMAG00000021869	si:ch1073-385f13.3	93	48.634	Xiphophorus_maculatus