EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000018986 (Gene tree)
Gene ID: 108427354
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 9819 bases
Position: chrKV575336.1:1028289-1038107
Accession: 108427354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013131	MMR_HSR1	PF01926.23	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020628	-	612	-	ENSPNAP00000013142	203 (aa)	-	-
ENSPNAT00000020643	-	1425	XM_017697414	ENSPNAP00000013131	209 (aa)	XP_017552903	UPI00081425C0

Gene Model

Click here to download ENSPNAG00000018986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000018986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000018986	si:dkey-16l2.16	99	70.531	ENSPNAG00000014046	-	92	74.595
ENSPNAG00000018986	si:dkey-16l2.16	85	36.364	ENSPNAG00000021994	rab36	71	36.364
ENSPNAG00000018986	si:dkey-16l2.16	73	39.610	ENSPNAG00000028379	rab6ba	74	39.610
ENSPNAG00000018986	si:dkey-16l2.16	98	41.627	ENSPNAG00000006431	-	80	45.402
ENSPNAG00000018986	si:dkey-16l2.16	68	34.028	ENSPNAG00000028497	si:cabz01085950.1	70	34.028
ENSPNAG00000018986	si:dkey-16l2.16	77	46.341	ENSPNAG00000013897	rab39ba	81	44.509
ENSPNAG00000018986	si:dkey-16l2.16	83	48.851	ENSPNAG00000010760	rab30	87	48.851
ENSPNAG00000018986	si:dkey-16l2.16	100	36.123	ENSPNAG00000017938	RAB9A	88	36.598
ENSPNAG00000018986	si:dkey-16l2.16	100	39.720	ENSPNAG00000029085	rab11al	83	44.444
ENSPNAG00000018986	si:dkey-16l2.16	55	30.172	ENSPNAG00000014755	zgc:110197	65	30.172
ENSPNAG00000018986	si:dkey-16l2.16	95	33.495	ENSPNAG00000003179	rab34a	73	34.737
ENSPNAG00000018986	si:dkey-16l2.16	77	39.286	ENSPNAG00000014146	-	79	39.286
ENSPNAG00000018986	si:dkey-16l2.16	74	33.540	ENSPNAG00000025619	dnajc27	59	33.540
ENSPNAG00000018986	si:dkey-16l2.16	55	30.172	ENSPNAG00000010083	arl3l2	60	30.172
ENSPNAG00000018986	si:dkey-16l2.16	78	43.976	ENSPNAG00000015031	rab12	69	43.195
ENSPNAG00000018986	si:dkey-16l2.16	83	49.425	ENSPNAG00000011215	rab15	82	49.425
ENSPNAG00000018986	si:dkey-16l2.16	98	40.000	ENSPNAG00000006569	rab25b	82	44.571
ENSPNAG00000018986	si:dkey-16l2.16	83	46.552	ENSPNAG00000015810	RAB15	85	46.552
ENSPNAG00000018986	si:dkey-16l2.16	86	31.148	ENSPNAG00000005318	-	87	31.148
ENSPNAG00000018986	si:dkey-16l2.16	96	33.816	ENSPNAG00000007277	RAB9A	82	35.632
ENSPNAG00000018986	si:dkey-16l2.16	82	45.143	ENSPNAG00000013589	rab39bb	82	45.143
ENSPNAG00000018986	si:dkey-16l2.16	78	33.333	ENSPNAG00000004728	rheb	88	33.333
ENSPNAG00000018986	si:dkey-16l2.16	96	37.313	ENSPNAG00000028138	rab5c	76	41.667
ENSPNAG00000018986	si:dkey-16l2.16	95	43.284	ENSPNAG00000002404	rab18b	89	44.974
ENSPNAG00000018986	si:dkey-16l2.16	98	41.262	ENSPNAG00000014863	rab11a	96	41.262
ENSPNAG00000018986	si:dkey-16l2.16	77	39.634	ENSPNAG00000010157	rab6bb	79	39.634
ENSPNAG00000018986	si:dkey-16l2.16	55	31.897	ENSPNAG00000002310	arl5c	62	31.897
ENSPNAG00000018986	si:dkey-16l2.16	73	40.994	ENSPNAG00000017466	rab38b	76	40.994
ENSPNAG00000018986	si:dkey-16l2.16	82	42.857	ENSPNAG00000016567	rab42a	82	42.857
ENSPNAG00000018986	si:dkey-16l2.16	83	33.714	ENSPNAG00000028629	kras	92	33.714
ENSPNAG00000018986	si:dkey-16l2.16	78	42.331	ENSPNAG00000014363	-	76	42.331
ENSPNAG00000018986	si:dkey-16l2.16	79	42.515	ENSPNAG00000002218	-	81	41.860
ENSPNAG00000018986	si:dkey-16l2.16	78	34.940	ENSPNAG00000014085	hrasa	87	34.940
ENSPNAG00000018986	si:dkey-16l2.16	99	54.589	ENSPNAG00000013004	rab1ba	90	57.923
ENSPNAG00000018986	si:dkey-16l2.16	78	39.645	ENSPNAG00000016600	-	81	39.645
ENSPNAG00000018986	si:dkey-16l2.16	76	50.625	ENSPNAG00000003227	rab3c	73	50.625
ENSPNAG00000018986	si:dkey-16l2.16	90	56.842	ENSPNAG00000013863	rab1ab	84	56.842
ENSPNAG00000018986	si:dkey-16l2.16	77	43.827	ENSPNAG00000021675	-	74	43.827
ENSPNAG00000018986	si:dkey-16l2.16	84	37.017	ENSPNAG00000018132	rab9b	79	37.017
ENSPNAG00000018986	si:dkey-16l2.16	76	30.233	ENSPNAG00000007710	rasl11a	65	30.233
ENSPNAG00000018986	si:dkey-16l2.16	73	41.558	ENSPNAG00000021737	rab41	73	41.558
ENSPNAG00000018986	si:dkey-16l2.16	96	36.946	ENSPNAG00000015161	rab22a	94	39.130
ENSPNAG00000018986	si:dkey-16l2.16	78	39.053	ENSPNAG00000015164	-	81	39.053
ENSPNAG00000018986	si:dkey-16l2.16	89	44.792	ENSPNAG00000022929	rab33a	62	44.792
ENSPNAG00000018986	si:dkey-16l2.16	80	43.452	ENSPNAG00000023223	rab5aa	78	43.452
ENSPNAG00000018986	si:dkey-16l2.16	84	49.438	ENSPNAG00000004189	rab13	94	49.438
ENSPNAG00000018986	si:dkey-16l2.16	90	33.333	ENSPNAG00000015040	rab34b	79	34.555
ENSPNAG00000018986	si:dkey-16l2.16	79	62.874	ENSPNAG00000029574	zgc:171927	79	63.253
ENSPNAG00000018986	si:dkey-16l2.16	76	46.541	ENSPNAG00000011193	rab2a	75	46.541
ENSPNAG00000018986	si:dkey-16l2.16	98	41.627	ENSPNAG00000020475	rab11ba	80	45.402
ENSPNAG00000018986	si:dkey-16l2.16	76	43.931	ENSPNAG00000029115	rab33ba	77	43.931
ENSPNAG00000018986	si:dkey-16l2.16	78	34.940	ENSPNAG00000000584	hrasb	87	34.940
ENSPNAG00000018986	si:dkey-16l2.16	91	57.812	ENSPNAG00000012540	-	93	57.812
ENSPNAG00000018986	si:dkey-16l2.16	89	46.561	ENSPNAG00000011548	rab18a	91	46.561
ENSPNAG00000018986	si:dkey-16l2.16	84	31.250	ENSPNAG00000024728	rab23	78	33.750
ENSPNAG00000018986	si:dkey-16l2.16	55	30.172	ENSPNAG00000027037	arl3	65	30.172
ENSPNAG00000018986	si:dkey-16l2.16	76	47.170	ENSPNAG00000000694	rab25a	76	47.170
ENSPNAG00000018986	si:dkey-16l2.16	82	33.143	ENSPNAG00000013747	mras	86	31.868
ENSPNAG00000018986	si:dkey-16l2.16	79	34.320	ENSPNAG00000026295	si:ch73-116o1.2	88	32.065
ENSPNAG00000018986	si:dkey-16l2.16	80	38.728	ENSPNAG00000020583	zgc:100918	84	38.728
ENSPNAG00000018986	si:dkey-16l2.16	77	39.024	ENSPNAG00000005519	-	79	39.024
ENSPNAG00000018986	si:dkey-16l2.16	56	31.667	ENSPNAG00000007188	ARL4D	56	32.203
ENSPNAG00000018986	si:dkey-16l2.16	86	42.541	ENSPNAG00000009496	rab5ab	83	42.541
ENSPNAG00000018986	si:dkey-16l2.16	81	46.961	ENSPNAG00000017856	zgc:101559	79	46.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	ENSAPOG00000008263	si:dkey-16l2.16	100	94.258	Acanthochromis_polyacanthus
ENSPNAG00000018986	si:dkey-16l2.16	100	94.737	ENSAOCG00000016825	si:dkey-16l2.16	100	94.737	Amphiprion_ocellaris
ENSPNAG00000018986	si:dkey-16l2.16	100	94.737	ENSAPEG00000006500	si:dkey-16l2.16	100	94.737	Amphiprion_percula
ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	ENSATEG00000019238	si:dkey-16l2.16	100	94.258	Anabas_testudineus
ENSPNAG00000018986	si:dkey-16l2.16	100	95.215	ENSACLG00000018721	si:dkey-16l2.16	100	95.215	Astatotilapia_calliptera
ENSPNAG00000018986	si:dkey-16l2.16	100	97.608	ENSAMXG00000038243	si:dkey-16l2.16	100	97.608	Astyanax_mexicanus
ENSPNAG00000018986	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSPNAG00000018986	si:dkey-16l2.16	100	93.301	ENSCVAG00000003537	si:dkey-16l2.16	100	93.301	Cyprinodon_variegatus
ENSPNAG00000018986	si:dkey-16l2.16	100	96.651	ENSDARG00000037967	si:dkey-16l2.16	99	99.153	Danio_rerio
ENSPNAG00000018986	si:dkey-16l2.16	99	88.517	ENSELUG00000023247	si:dkey-16l2.16	99	88.517	Esox_lucius
ENSPNAG00000018986	si:dkey-16l2.16	58	93.388	ENSFHEG00000000767	si:dkey-16l2.16	78	93.388	Fundulus_heteroclitus
ENSPNAG00000018986	si:dkey-16l2.16	77	85.093	ENSGMOG00000015174	si:dkey-16l2.16	98	85.093	Gadus_morhua
ENSPNAG00000018986	si:dkey-16l2.16	100	87.081	ENSGAFG00000005388	si:dkey-16l2.16	100	87.081	Gambusia_affinis
ENSPNAG00000018986	si:dkey-16l2.16	100	94.737	ENSGACG00000014915	si:dkey-16l2.16	98	94.737	Gasterosteus_aculeatus
ENSPNAG00000018986	si:dkey-16l2.16	100	95.694	ENSHBUG00000019261	si:dkey-16l2.16	100	95.694	Haplochromis_burtoni
ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	ENSHCOG00000006538	si:dkey-16l2.16	100	94.258	Hippocampus_comes
ENSPNAG00000018986	si:dkey-16l2.16	100	89.952	ENSKMAG00000003494	si:dkey-16l2.16	100	89.952	Kryptolebias_marmoratus
ENSPNAG00000018986	si:dkey-16l2.16	100	95.215	ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	Labrus_bergylta
ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	Mastacembelus_armatus
ENSPNAG00000018986	si:dkey-16l2.16	100	95.215	ENSMZEG00005002081	si:dkey-16l2.16	100	95.215	Maylandia_zebra
ENSPNAG00000018986	si:dkey-16l2.16	99	94.175	ENSMMOG00000020140	si:dkey-16l2.16	97	94.175	Mola_mola
ENSPNAG00000018986	si:dkey-16l2.16	100	91.866	ENSMALG00000014727	si:dkey-16l2.16	99	91.866	Monopterus_albus
ENSPNAG00000018986	si:dkey-16l2.16	100	94.737	ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	Neolamprologus_brichardi
ENSPNAG00000018986	si:dkey-16l2.16	100	95.215	ENSONIG00000009443	si:dkey-16l2.16	100	95.215	Oreochromis_niloticus
ENSPNAG00000018986	si:dkey-16l2.16	100	89.474	ENSORLG00000001098	si:dkey-16l2.16	99	89.474	Oryzias_latipes
ENSPNAG00000018986	si:dkey-16l2.16	100	89.474	ENSORLG00020000867	si:dkey-16l2.16	99	89.474	Oryzias_latipes_hni
ENSPNAG00000018986	si:dkey-16l2.16	100	89.474	ENSOMEG00000015474	si:dkey-16l2.16	100	90.431	Oryzias_melastigma
ENSPNAG00000018986	si:dkey-16l2.16	100	81.340	ENSPKIG00000018888	si:dkey-16l2.16	94	84.184	Paramormyrops_kingsleyae
ENSPNAG00000018986	si:dkey-16l2.16	100	93.301	ENSPKIG00000005686	-	100	93.301	Paramormyrops_kingsleyae
ENSPNAG00000018986	si:dkey-16l2.16	100	92.344	ENSPMGG00000000751	si:dkey-16l2.16	100	92.344	Periophthalmus_magnuspinnatus
ENSPNAG00000018986	si:dkey-16l2.16	100	88.038	ENSPFOG00000004746	si:dkey-16l2.16	100	88.038	Poecilia_formosa
ENSPNAG00000018986	si:dkey-16l2.16	100	87.560	ENSPLAG00000021043	si:dkey-16l2.16	100	87.560	Poecilia_latipinna
ENSPNAG00000018986	si:dkey-16l2.16	100	88.038	ENSPMEG00000007165	si:dkey-16l2.16	100	88.038	Poecilia_mexicana
ENSPNAG00000018986	si:dkey-16l2.16	100	87.560	ENSPREG00000005323	si:dkey-16l2.16	100	87.560	Poecilia_reticulata
ENSPNAG00000018986	si:dkey-16l2.16	100	95.694	ENSPNYG00000009490	si:dkey-16l2.16	100	95.694	Pundamilia_nyererei
ENSPNAG00000018986	si:dkey-16l2.16	99	81.731	ENSSFOG00015006414	-	93	81.633	Scleropages_formosus
ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	ENSSFOG00015021448	-	100	94.258	Scleropages_formosus
ENSPNAG00000018986	si:dkey-16l2.16	100	89.474	ENSSMAG00000011769	si:dkey-16l2.16	94	89.474	Scophthalmus_maximus
ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	ENSSDUG00000005719	si:dkey-16l2.16	100	94.258	Seriola_dumerili
ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	ENSSLDG00000003631	si:dkey-16l2.16	100	94.258	Seriola_lalandi_dorsalis
ENSPNAG00000018986	si:dkey-16l2.16	100	94.737	ENSSPAG00000006302	si:dkey-16l2.16	100	94.737	Stegastes_partitus
ENSPNAG00000018986	si:dkey-16l2.16	100	92.823	ENSTRUG00000025076	si:dkey-16l2.16	100	92.823	Takifugu_rubripes
ENSPNAG00000018986	si:dkey-16l2.16	100	93.780	ENSTNIG00000011300	si:dkey-16l2.16	100	93.780	Tetraodon_nigroviridis
ENSPNAG00000018986	si:dkey-16l2.16	100	87.560	ENSXMAG00000021767	si:dkey-16l2.16	100	87.560	Xiphophorus_maculatus