EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000019111 (Gene tree)
Gene ID: 108427810
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 1385 bases
Position: chrKV575342.1:1783674-1785058
Accession: 108427810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000031630	RNase_H2_suC	PF08615.11	2.6e-19	1	1
ENSPNAP00000013189	RNase_H2_suC	PF08615.11	4.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020706	-	426	-	ENSPNAP00000013189	141 (aa)	-	-
ENSPNAT00000020733	-	411	XM_017698301	ENSPNAP00000031630	136 (aa)	XP_017553790	UPI0008143C3C

Gene Model

Click here to download ENSPNAG00000019111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000019111	rnaseh2c	99	64.444	ENSAPOG00000012901	rnaseh2c	99	64.444	Acanthochromis_polyacanthus
ENSPNAG00000019111	rnaseh2c	99	62.963	ENSACIG00000022433	rnaseh2c	99	62.963	Amphilophus_citrinellus
ENSPNAG00000019111	rnaseh2c	99	63.704	ENSAOCG00000016855	rnaseh2c	99	63.704	Amphiprion_ocellaris
ENSPNAG00000019111	rnaseh2c	99	64.444	ENSAPEG00000009850	rnaseh2c	99	64.444	Amphiprion_percula
ENSPNAG00000019111	rnaseh2c	99	65.926	ENSATEG00000014395	rnaseh2c	99	65.926	Anabas_testudineus
ENSPNAG00000019111	rnaseh2c	99	62.963	ENSACLG00000016950	rnaseh2c	99	62.963	Astatotilapia_calliptera
ENSPNAG00000019111	rnaseh2c	99	85.926	ENSAMXG00000001210	rnaseh2c	100	85.926	Astyanax_mexicanus
ENSPNAG00000019111	rnaseh2c	99	52.985	ENSCPBG00000023408	-	96	52.985	Chrysemys_picta_bellii
ENSPNAG00000019111	rnaseh2c	99	62.222	ENSCSEG00000005808	rnaseh2c	98	62.222	Cynoglossus_semilaevis
ENSPNAG00000019111	rnaseh2c	99	66.667	ENSCVAG00000006337	rnaseh2c	99	66.667	Cyprinodon_variegatus
ENSPNAG00000019111	rnaseh2c	99	77.037	ENSDARG00000089637	rnaseh2c	99	77.037	Danio_rerio
ENSPNAG00000019111	rnaseh2c	88	45.528	ENSEBUG00000014939	rnaseh2c	79	45.528	Eptatretus_burgeri
ENSPNAG00000019111	rnaseh2c	99	64.706	ENSELUG00000007345	rnaseh2c	99	64.706	Esox_lucius
ENSPNAG00000019111	rnaseh2c	96	66.923	ENSFHEG00000002419	rnaseh2c	96	67.939	Fundulus_heteroclitus
ENSPNAG00000019111	rnaseh2c	65	60.674	ENSGMOG00000008727	rnaseh2c	99	60.674	Gadus_morhua
ENSPNAG00000019111	rnaseh2c	99	64.444	ENSGAFG00000016755	rnaseh2c	82	64.444	Gambusia_affinis
ENSPNAG00000019111	rnaseh2c	99	53.933	ENSGAGG00000008193	-	96	52.239	Gopherus_agassizii
ENSPNAG00000019111	rnaseh2c	99	62.963	ENSHBUG00000012806	rnaseh2c	99	62.963	Haplochromis_burtoni
ENSPNAG00000019111	rnaseh2c	99	60.741	ENSHCOG00000007177	rnaseh2c	99	60.741	Hippocampus_comes
ENSPNAG00000019111	rnaseh2c	99	78.519	ENSIPUG00000018044	rnaseh2c	99	78.519	Ictalurus_punctatus
ENSPNAG00000019111	rnaseh2c	99	60.000	ENSKMAG00000004184	rnaseh2c	99	60.000	Kryptolebias_marmoratus
ENSPNAG00000019111	rnaseh2c	99	63.235	ENSLBEG00000005742	rnaseh2c	99	63.235	Labrus_bergylta
ENSPNAG00000019111	rnaseh2c	96	57.692	ENSLACG00000010120	-	92	57.252	Latimeria_chalumnae
ENSPNAG00000019111	rnaseh2c	99	66.667	ENSMAMG00000021610	rnaseh2c	99	66.667	Mastacembelus_armatus
ENSPNAG00000019111	rnaseh2c	99	63.704	ENSMZEG00005004796	rnaseh2c	99	63.704	Maylandia_zebra
ENSPNAG00000019111	rnaseh2c	99	62.222	ENSMMOG00000002869	rnaseh2c	99	62.222	Mola_mola
ENSPNAG00000019111	rnaseh2c	99	65.441	ENSMALG00000012198	rnaseh2c	99	65.441	Monopterus_albus
ENSPNAG00000019111	rnaseh2c	99	62.963	ENSNBRG00000001462	rnaseh2c	99	62.963	Neolamprologus_brichardi
ENSPNAG00000019111	rnaseh2c	99	62.222	ENSONIG00000005338	rnaseh2c	99	62.222	Oreochromis_niloticus
ENSPNAG00000019111	rnaseh2c	99	62.222	ENSORLG00000023473	rnaseh2c	99	62.222	Oryzias_latipes
ENSPNAG00000019111	rnaseh2c	99	62.222	ENSORLG00020019053	rnaseh2c	91	62.222	Oryzias_latipes_hni
ENSPNAG00000019111	rnaseh2c	99	62.222	ENSORLG00015017067	rnaseh2c	91	62.222	Oryzias_latipes_hsok
ENSPNAG00000019111	rnaseh2c	99	62.222	ENSOMEG00000018607	rnaseh2c	99	62.222	Oryzias_melastigma
ENSPNAG00000019111	rnaseh2c	99	60.741	ENSPKIG00000019331	rnaseh2c	99	60.741	Paramormyrops_kingsleyae
ENSPNAG00000019111	rnaseh2c	99	63.704	ENSPFOG00000009415	rnaseh2c	100	63.235	Poecilia_formosa
ENSPNAG00000019111	rnaseh2c	99	64.444	ENSPLAG00000023330	rnaseh2c	99	64.444	Poecilia_latipinna
ENSPNAG00000019111	rnaseh2c	99	62.963	ENSPMEG00000003696	rnaseh2c	100	62.500	Poecilia_mexicana
ENSPNAG00000019111	rnaseh2c	99	59.589	ENSPREG00000015384	rnaseh2c	72	59.589	Poecilia_reticulata
ENSPNAG00000019111	rnaseh2c	99	62.963	ENSPNYG00000014766	rnaseh2c	99	62.963	Pundamilia_nyererei
ENSPNAG00000019111	rnaseh2c	100	72.059	ENSSFOG00015005760	rnaseh2c	99	72.059	Scleropages_formosus
ENSPNAG00000019111	rnaseh2c	99	65.185	ENSSMAG00000017738	rnaseh2c	99	65.185	Scophthalmus_maximus
ENSPNAG00000019111	rnaseh2c	99	64.444	ENSSDUG00000017285	rnaseh2c	99	64.444	Seriola_dumerili
ENSPNAG00000019111	rnaseh2c	99	65.185	ENSSLDG00000016030	rnaseh2c	99	65.185	Seriola_lalandi_dorsalis
ENSPNAG00000019111	rnaseh2c	92	53.906	ENSSPUG00000000842	-	84	53.906	Sphenodon_punctatus
ENSPNAG00000019111	rnaseh2c	99	62.963	ENSSPAG00000007536	rnaseh2c	99	62.963	Stegastes_partitus
ENSPNAG00000019111	rnaseh2c	99	59.259	ENSTRUG00000021845	rnaseh2c	99	59.259	Takifugu_rubripes
ENSPNAG00000019111	rnaseh2c	99	62.963	ENSTNIG00000000431	rnaseh2c	99	62.963	Tetraodon_nigroviridis
ENSPNAG00000019111	rnaseh2c	98	52.632	ENSXETG00000032466	-	96	52.632	Xenopus_tropicalis
ENSPNAG00000019111	rnaseh2c	95	67.442	ENSXCOG00000001611	rnaseh2c	96	67.442	Xiphophorus_couchianus
ENSPNAG00000019111	rnaseh2c	99	65.926	ENSXMAG00000003147	rnaseh2c	82	65.926	Xiphophorus_maculatus