EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000019165 (Gene tree)
Gene ID: 108427350
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 42526 bases
Position: chrKV575336.1:905330-947855
Accession: 108427350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000031690	RRM_1	PF00076.22	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020885	-	8416	XM_017697408	ENSPNAP00000031690	2275 (aa)	XP_017552897	UPI000814500E

Gene Model

Click here to download ENSPNAG00000019165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000019165	setd1a	82	91.045	ENSAPOG00000018002	setd1a	79	89.474	Acanthochromis_polyacanthus
ENSPNAG00000019165	setd1a	73	85.135	ENSACIG00000007144	setd1a	84	80.864	Amphilophus_citrinellus
ENSPNAG00000019165	setd1a	67	65.068	ENSACAG00000007606	-	56	79.545	Anolis_carolinensis
ENSPNAG00000019165	setd1a	100	84.458	ENSAMXG00000009497	setd1a	100	84.197	Astyanax_mexicanus
ENSPNAG00000019165	setd1a	100	60.249	ENSCVAG00000011672	setd1a	100	59.923	Cyprinodon_variegatus
ENSPNAG00000019165	setd1a	100	72.888	ENSDARG00000060030	setd1a	100	72.896	Danio_rerio
ENSPNAG00000019165	setd1a	100	56.514	ENSFHEG00000023258	setd1a	99	56.229	Fundulus_heteroclitus
ENSPNAG00000019165	setd1a	61	83.713	ENSGAFG00000011698	setd1a	83	85.714	Gambusia_affinis
ENSPNAG00000019165	setd1a	71	77.703	ENSGACG00000013688	setd1a	83	78.041	Gasterosteus_aculeatus
ENSPNAG00000019165	setd1a	76	74.795	ENSHCOG00000003119	setd1a	91	80.597	Hippocampus_comes
ENSPNAG00000019165	setd1a	100	71.175	ENSIPUG00000007413	setd1a	100	71.453	Ictalurus_punctatus
ENSPNAG00000019165	setd1a	70	82.239	ENSMAMG00000021851	setd1a	74	83.846	Mastacembelus_armatus
ENSPNAG00000019165	setd1a	68	79.178	ENSMMOG00000016992	setd1a	94	83.881	Mola_mola
ENSPNAG00000019165	setd1a	73	59.327	ENSMALG00000007401	setd1a	98	57.075	Monopterus_albus
ENSPNAG00000019165	setd1a	100	58.084	ENSPFOG00000013669	setd1a	100	57.277	Poecilia_formosa
ENSPNAG00000019165	setd1a	100	59.000	ENSPLAG00000009294	setd1a	100	59.358	Poecilia_latipinna
ENSPNAG00000019165	setd1a	100	59.169	ENSPMEG00000005864	setd1a	100	59.340	Poecilia_mexicana
ENSPNAG00000019165	setd1a	51	80.822	ENSRBIG00000033047	-	56	79.461	Rhinopithecus_bieti
ENSPNAG00000019165	setd1a	71	87.755	ENSTNIG00000014930	setd1a	56	86.275	Tetraodon_nigroviridis
ENSPNAG00000019165	setd1a	57	67.841	ENSXCOG00000017585	setd1a	97	60.768	Xiphophorus_couchianus
ENSPNAG00000019165	setd1a	100	59.136	ENSXMAG00000008021	setd1a	100	59.221	Xiphophorus_maculatus