EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000019200 (Gene tree)
Gene ID: 108437863
Gene Symbol: zgc:55733
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 19324 bases
Position: chrKV575534.1:1019906-1039229
Accession: 108437863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000031713	RRM_1	PF00076.22	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020939	-	1895	XM_017715267	ENSPNAP00000031713	301 (aa)	XP_017570756	UPI000814B0A5

Gene Model

Click here to download ENSPNAG00000019200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000019200	zgc:55733	82	77.381	ENSPNAG00000015686	hnrnpc	89	76.604
ENSPNAG00000019200	zgc:55733	91	48.551	ENSPNAG00000011812	raly	80	50.431
ENSPNAG00000019200	zgc:55733	79	51.020	ENSPNAG00000026098	-	81	50.000
ENSPNAG00000019200	zgc:55733	90	48.561	ENSPNAG00000000498	-	70	51.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000019200	zgc:55733	93	49.826	ENSG00000184672	RALYL	92	76.923	Homo_sapiens
ENSPNAG00000019200	zgc:55733	81	74.902	ENSAPOG00000006963	hnrnpc	86	73.704	Acanthochromis_polyacanthus
ENSPNAG00000019200	zgc:55733	83	75.096	ENSACIG00000000270	-	83	83.186	Amphilophus_citrinellus
ENSPNAG00000019200	zgc:55733	83	75.000	ENSACIG00000016568	-	91	73.171	Amphilophus_citrinellus
ENSPNAG00000019200	zgc:55733	81	74.510	ENSAOCG00000003896	-	86	73.333	Amphiprion_ocellaris
ENSPNAG00000019200	zgc:55733	81	75.686	ENSAOCG00000021616	-	82	75.093	Amphiprion_ocellaris
ENSPNAG00000019200	zgc:55733	83	75.290	ENSAPEG00000019962	-	85	75.465	Amphiprion_percula
ENSPNAG00000019200	zgc:55733	81	74.510	ENSAPEG00000001489	-	86	73.333	Amphiprion_percula
ENSPNAG00000019200	zgc:55733	83	72.692	ENSATEG00000011734	-	86	73.801	Anabas_testudineus
ENSPNAG00000019200	zgc:55733	86	76.015	ENSATEG00000018006	-	83	76.015	Anabas_testudineus
ENSPNAG00000019200	zgc:55733	79	50.602	ENSAPLG00000015574	RALYL	83	52.610	Anas_platyrhynchos
ENSPNAG00000019200	zgc:55733	79	49.799	ENSACAG00000028464	RALYL	83	51.807	Anolis_carolinensis
ENSPNAG00000019200	zgc:55733	79	54.202	ENSANAG00000023383	RALYL	81	54.468	Aotus_nancymaae
ENSPNAG00000019200	zgc:55733	86	74.539	ENSACLG00000005707	-	89	74.539	Astatotilapia_calliptera
ENSPNAG00000019200	zgc:55733	96	70.690	ENSACLG00000000995	-	81	83.333	Astatotilapia_calliptera
ENSPNAG00000019200	zgc:55733	79	76.763	ENSACLG00000013636	-	84	78.988	Astatotilapia_calliptera
ENSPNAG00000019200	zgc:55733	86	61.390	ENSAMXG00000042946	hnrnpc	97	75.000	Astyanax_mexicanus
ENSPNAG00000019200	zgc:55733	86	85.714	ENSAMXG00000034915	zgc:55733	91	85.714	Astyanax_mexicanus
ENSPNAG00000019200	zgc:55733	79	54.202	ENSCJAG00000000402	RALYL	81	53.617	Callithrix_jacchus
ENSPNAG00000019200	zgc:55733	92	47.766	ENSCPOG00000012314	RALYL	83	51.406	Cavia_porcellus
ENSPNAG00000019200	zgc:55733	79	54.202	ENSCCAG00000025003	RALYL	76	76.923	Cebus_capucinus
ENSPNAG00000019200	zgc:55733	93	49.826	ENSCATG00000042145	RALYL	81	54.468	Cercocebus_atys
ENSPNAG00000019200	zgc:55733	79	51.406	ENSCLAG00000005228	RALYL	83	51.406	Chinchilla_lanigera
ENSPNAG00000019200	zgc:55733	73	52.966	ENSCHOG00000013228	RALYL	78	50.612	Choloepus_hoffmanni
ENSPNAG00000019200	zgc:55733	93	49.826	ENSCANG00000039144	RALYL	81	54.468	Colobus_angolensis_palliatus
ENSPNAG00000019200	zgc:55733	79	51.406	ENSCGRG00001009241	Ralyl	83	53.012	Cricetulus_griseus_chok1gshd
ENSPNAG00000019200	zgc:55733	81	73.878	ENSCSEG00000021349	-	81	71.984	Cynoglossus_semilaevis
ENSPNAG00000019200	zgc:55733	73	68.750	ENSCSEG00000019769	-	74	69.778	Cynoglossus_semilaevis
ENSPNAG00000019200	zgc:55733	81	74.219	ENSCVAG00000016981	-	83	72.563	Cyprinodon_variegatus
ENSPNAG00000019200	zgc:55733	88	62.230	ENSCVAG00000002797	-	81	65.992	Cyprinodon_variegatus
ENSPNAG00000019200	zgc:55733	100	82.450	ENSDARG00000103845	zgc:55733	94	84.766	Danio_rerio
ENSPNAG00000019200	zgc:55733	82	74.206	ENSDARG00000053810	hnrnpc	82	72.348	Danio_rerio
ENSPNAG00000019200	zgc:55733	79	52.209	ENSDORG00000003721	Ralyl	83	53.815	Dipodomys_ordii
ENSPNAG00000019200	zgc:55733	54	56.897	ENSETEG00000014028	RALYL	85	58.683	Echinops_telfairi
ENSPNAG00000019200	zgc:55733	93	42.414	ENSEBUG00000012363	hnrnpc	67	48.458	Eptatretus_burgeri
ENSPNAG00000019200	zgc:55733	71	49.533	ENSEBUG00000006049	RALYL	74	48.598	Eptatretus_burgeri
ENSPNAG00000019200	zgc:55733	79	51.807	ENSEEUG00000007202	RALYL	84	53.815	Erinaceus_europaeus
ENSPNAG00000019200	zgc:55733	86	73.188	ENSELUG00000004132	-	91	74.729	Esox_lucius
ENSPNAG00000019200	zgc:55733	84	74.717	ENSELUG00000007714	-	91	73.034	Esox_lucius
ENSPNAG00000019200	zgc:55733	98	45.603	ENSFALG00000008647	RALYL	99	58.559	Ficedula_albicollis
ENSPNAG00000019200	zgc:55733	76	72.653	ENSFHEG00000007278	-	94	63.666	Fundulus_heteroclitus
ENSPNAG00000019200	zgc:55733	87	71.326	ENSFHEG00000003605	-	86	71.642	Fundulus_heteroclitus
ENSPNAG00000019200	zgc:55733	77	54.741	ENSGALG00000036938	RALYL	82	52.610	Gallus_gallus
ENSPNAG00000019200	zgc:55733	96	68.562	ENSGAFG00000020992	-	83	74.786	Gambusia_affinis
ENSPNAG00000019200	zgc:55733	87	73.835	ENSGAFG00000020486	-	81	79.821	Gambusia_affinis
ENSPNAG00000019200	zgc:55733	75	67.699	ENSGACG00000018932	-	88	66.222	Gasterosteus_aculeatus
ENSPNAG00000019200	zgc:55733	83	74.131	ENSGACG00000017772	-	93	74.390	Gasterosteus_aculeatus
ENSPNAG00000019200	zgc:55733	93	49.826	ENSGGOG00000000841	RALYL	81	54.468	Gorilla_gorilla
ENSPNAG00000019200	zgc:55733	81	74.902	ENSHBUG00000018342	-	86	77.860	Haplochromis_burtoni
ENSPNAG00000019200	zgc:55733	86	74.539	ENSHBUG00000010527	-	83	74.539	Haplochromis_burtoni
ENSPNAG00000019200	zgc:55733	79	51.004	ENSHGLG00000004866	RALYL	83	51.004	Heterocephalus_glaber_female
ENSPNAG00000019200	zgc:55733	79	51.004	ENSHGLG00100017480	RALYL	83	51.004	Heterocephalus_glaber_male
ENSPNAG00000019200	zgc:55733	83	70.229	ENSHCOG00000012333	hnrnpc	90	69.314	Hippocampus_comes
ENSPNAG00000019200	zgc:55733	91	86.545	ENSIPUG00000008666	zgc:55733	94	88.182	Ictalurus_punctatus
ENSPNAG00000019200	zgc:55733	83	75.686	ENSIPUG00000011271	hnrnpc	98	75.325	Ictalurus_punctatus
ENSPNAG00000019200	zgc:55733	79	51.807	ENSSTOG00000012583	RALYL	84	53.414	Ictidomys_tridecemlineatus
ENSPNAG00000019200	zgc:55733	88	73.913	ENSKMAG00000011170	-	85	74.254	Kryptolebias_marmoratus
ENSPNAG00000019200	zgc:55733	81	74.609	ENSKMAG00000018265	-	83	72.963	Kryptolebias_marmoratus
ENSPNAG00000019200	zgc:55733	86	72.000	ENSLBEG00000006979	-	84	71.600	Labrus_bergylta
ENSPNAG00000019200	zgc:55733	85	74.254	ENSLBEG00000006193	-	83	74.349	Labrus_bergylta
ENSPNAG00000019200	zgc:55733	88	67.361	ENSLBEG00000024418	-	85	69.549	Labrus_bergylta
ENSPNAG00000019200	zgc:55733	74	71.368	ENSLOCG00000002560	hnrnpc	91	66.182	Lepisosteus_oculatus
ENSPNAG00000019200	zgc:55733	93	49.826	ENSMNEG00000033288	RALYL	81	54.468	Macaca_nemestrina
ENSPNAG00000019200	zgc:55733	93	49.826	ENSMLEG00000038284	RALYL	81	54.468	Mandrillus_leucophaeus
ENSPNAG00000019200	zgc:55733	83	74.806	ENSMAMG00000012236	-	85	73.930	Mastacembelus_armatus
ENSPNAG00000019200	zgc:55733	95	72.069	ENSMAMG00000008033	-	89	76.015	Mastacembelus_armatus
ENSPNAG00000019200	zgc:55733	83	73.541	ENSMZEG00005020460	-	88	76.357	Maylandia_zebra
ENSPNAG00000019200	zgc:55733	86	74.539	ENSMZEG00005024249	-	83	74.539	Maylandia_zebra
ENSPNAG00000019200	zgc:55733	79	51.406	ENSMAUG00000015149	Ralyl	83	53.012	Mesocricetus_auratus
ENSPNAG00000019200	zgc:55733	79	53.782	ENSMICG00000005558	RALYL	85	72.619	Microcebus_murinus
ENSPNAG00000019200	zgc:55733	79	51.004	ENSMOCG00000017371	Ralyl	83	52.610	Microtus_ochrogaster
ENSPNAG00000019200	zgc:55733	88	70.037	ENSMMOG00000019520	-	93	73.061	Mola_mola
ENSPNAG00000019200	zgc:55733	85	71.805	ENSMMOG00000021465	-	91	75.655	Mola_mola
ENSPNAG00000019200	zgc:55733	86	75.556	ENSMALG00000014623	-	83	73.606	Monopterus_albus
ENSPNAG00000019200	zgc:55733	83	71.429	ENSMALG00000007520	-	84	69.478	Monopterus_albus
ENSPNAG00000019200	zgc:55733	79	51.004	ENSMUSG00000039717	Ralyl	99	71.429	Mus_musculus
ENSPNAG00000019200	zgc:55733	79	52.610	ENSMPUG00000010724	RALYL	83	52.209	Mustela_putorius_furo
ENSPNAG00000019200	zgc:55733	79	51.807	ENSNGAG00000013375	Ralyl	83	53.414	Nannospalax_galili
ENSPNAG00000019200	zgc:55733	86	74.539	ENSNBRG00000015676	-	83	74.539	Neolamprologus_brichardi
ENSPNAG00000019200	zgc:55733	81	79.297	ENSNBRG00000004912	-	95	75.210	Neolamprologus_brichardi
ENSPNAG00000019200	zgc:55733	79	54.202	ENSNLEG00000002702	RALYL	77	55.508	Nomascus_leucogenys
ENSPNAG00000019200	zgc:55733	63	49.254	ENSOPRG00000013650	-	100	46.154	Ochotona_princeps
ENSPNAG00000019200	zgc:55733	79	51.406	ENSODEG00000001012	RALYL	83	51.406	Octodon_degus
ENSPNAG00000019200	zgc:55733	81	75.686	ENSONIG00000007859	-	95	76.056	Oreochromis_niloticus
ENSPNAG00000019200	zgc:55733	86	74.539	ENSONIG00000018350	-	83	74.539	Oreochromis_niloticus
ENSPNAG00000019200	zgc:55733	81	69.231	ENSORLG00000009999	-	86	67.273	Oryzias_latipes
ENSPNAG00000019200	zgc:55733	81	73.384	ENSORLG00000003144	-	82	72.202	Oryzias_latipes
ENSPNAG00000019200	zgc:55733	81	68.846	ENSORLG00020018228	hnrnpc	86	66.909	Oryzias_latipes_hni
ENSPNAG00000019200	zgc:55733	81	73.384	ENSORLG00015009460	-	82	72.202	Oryzias_latipes_hsok
ENSPNAG00000019200	zgc:55733	81	69.231	ENSORLG00015019755	-	86	67.273	Oryzias_latipes_hsok
ENSPNAG00000019200	zgc:55733	81	76.562	ENSOMEG00000022665	-	83	75.185	Oryzias_melastigma
ENSPNAG00000019200	zgc:55733	81	68.462	ENSOMEG00000020488	-	85	70.111	Oryzias_melastigma
ENSPNAG00000019200	zgc:55733	93	49.826	ENSPPAG00000038705	RALYL	81	54.468	Pan_paniscus
ENSPNAG00000019200	zgc:55733	79	55.042	ENSPPRG00000018612	RALYL	82	55.649	Panthera_pardus
ENSPNAG00000019200	zgc:55733	79	55.042	ENSPTIG00000020331	RALYL	82	55.649	Panthera_tigris_altaica
ENSPNAG00000019200	zgc:55733	93	49.826	ENSPTRG00000020381	RALYL	81	54.468	Pan_troglodytes
ENSPNAG00000019200	zgc:55733	93	49.826	ENSPANG00000029305	RALYL	81	54.468	Papio_anubis
ENSPNAG00000019200	zgc:55733	77	82.479	ENSPKIG00000022837	-	83	74.906	Paramormyrops_kingsleyae
ENSPNAG00000019200	zgc:55733	86	72.161	ENSPKIG00000008592	-	85	75.636	Paramormyrops_kingsleyae
ENSPNAG00000019200	zgc:55733	79	50.201	ENSPSIG00000011135	RALYL	82	52.209	Pelodiscus_sinensis
ENSPNAG00000019200	zgc:55733	74	79.204	ENSPMGG00000013144	-	83	76.000	Periophthalmus_magnuspinnatus
ENSPNAG00000019200	zgc:55733	75	73.043	ENSPMGG00000017774	-	90	65.625	Periophthalmus_magnuspinnatus
ENSPNAG00000019200	zgc:55733	79	51.406	ENSPEMG00000016447	Ralyl	83	53.012	Peromyscus_maniculatus_bairdii
ENSPNAG00000019200	zgc:55733	73	53.191	ENSPMAG00000002407	RALYL	99	53.191	Petromyzon_marinus
ENSPNAG00000019200	zgc:55733	95	66.343	ENSPFOG00000002643	-	84	72.527	Poecilia_formosa
ENSPNAG00000019200	zgc:55733	87	71.119	ENSPFOG00000001583	-	85	71.747	Poecilia_formosa
ENSPNAG00000019200	zgc:55733	81	74.118	ENSPLAG00000000061	-	82	73.606	Poecilia_latipinna
ENSPNAG00000019200	zgc:55733	87	70.652	ENSPLAG00000015305	-	85	71.269	Poecilia_latipinna
ENSPNAG00000019200	zgc:55733	81	74.118	ENSPMEG00000016524	-	82	73.606	Poecilia_mexicana
ENSPNAG00000019200	zgc:55733	87	72.826	ENSPMEG00000004802	-	85	72.388	Poecilia_mexicana
ENSPNAG00000019200	zgc:55733	81	73.725	ENSPREG00000001852	-	88	72.862	Poecilia_reticulata
ENSPNAG00000019200	zgc:55733	79	77.778	ENSPREG00000007928	-	81	75.984	Poecilia_reticulata
ENSPNAG00000019200	zgc:55733	79	42.857	ENSPPYG00000018710	-	67	73.469	Pongo_abelii
ENSPNAG00000019200	zgc:55733	93	45.946	ENSPVAG00000010821	RALYL	82	50.602	Pteropus_vampyrus
ENSPNAG00000019200	zgc:55733	86	74.539	ENSPNYG00000003747	-	89	74.539	Pundamilia_nyererei
ENSPNAG00000019200	zgc:55733	81	78.516	ENSPNYG00000020293	-	87	78.161	Pundamilia_nyererei
ENSPNAG00000019200	zgc:55733	93	49.826	ENSRROG00000023925	RALYL	81	75.000	Rhinopithecus_roxellana
ENSPNAG00000019200	zgc:55733	82	76.046	ENSSFOG00015012924	-	81	93.750	Scleropages_formosus
ENSPNAG00000019200	zgc:55733	86	69.343	ENSSFOG00015012015	-	82	81.448	Scleropages_formosus
ENSPNAG00000019200	zgc:55733	83	77.255	ENSSMAG00000011147	-	93	70.261	Scophthalmus_maximus
ENSPNAG00000019200	zgc:55733	81	75.000	ENSSMAG00000013592	-	84	74.157	Scophthalmus_maximus
ENSPNAG00000019200	zgc:55733	87	74.909	ENSSDUG00000001723	-	86	74.074	Seriola_dumerili
ENSPNAG00000019200	zgc:55733	86	74.444	ENSSDUG00000006730	-	84	75.185	Seriola_dumerili
ENSPNAG00000019200	zgc:55733	85	75.281	ENSSLDG00000007454	-	87	73.704	Seriola_lalandi_dorsalis
ENSPNAG00000019200	zgc:55733	86	74.074	ENSSLDG00000007474	-	91	76.471	Seriola_lalandi_dorsalis
ENSPNAG00000019200	zgc:55733	86	74.908	ENSSPAG00000023204	-	86	74.815	Stegastes_partitus
ENSPNAG00000019200	zgc:55733	86	75.836	ENSSPAG00000013996	-	83	75.836	Stegastes_partitus
ENSPNAG00000019200	zgc:55733	75	51.883	ENSTGUG00000011689	RALYL	83	53.012	Taeniopygia_guttata
ENSPNAG00000019200	zgc:55733	73	76.923	ENSTRUG00000020158	-	83	71.815	Takifugu_rubripes
ENSPNAG00000019200	zgc:55733	80	67.073	ENSTNIG00000000334	-	89	69.323	Tetraodon_nigroviridis
ENSPNAG00000019200	zgc:55733	71	76.168	ENSTNIG00000007427	-	84	70.270	Tetraodon_nigroviridis
ENSPNAG00000019200	zgc:55733	73	47.679	ENSTBEG00000005551	RALYL	91	47.699	Tupaia_belangeri
ENSPNAG00000019200	zgc:55733	79	50.403	ENSTTRG00000015762	RALYL	82	51.639	Tursiops_truncatus
ENSPNAG00000019200	zgc:55733	79	50.633	ENSVPAG00000008501	RALYL	82	51.681	Vicugna_pacos
ENSPNAG00000019200	zgc:55733	85	66.544	ENSXCOG00000006552	-	81	67.442	Xiphophorus_couchianus
ENSPNAG00000019200	zgc:55733	51	84.049	ENSXCOG00000019434	-	95	64.854	Xiphophorus_couchianus
ENSPNAG00000019200	zgc:55733	81	73.725	ENSXMAG00000022849	-	86	72.862	Xiphophorus_maculatus
ENSPNAG00000019200	zgc:55733	87	71.326	ENSXMAG00000009333	-	85	71.642	Xiphophorus_maculatus