EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000019324 (Gene tree)
Gene ID: 108428344
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 47073 bases
Position: chrKV575346.1:3211941-3259013
Accession: 108428344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013463	Npa1	PF11707.8	8.9e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000021165	-	10071	XM_017699270	ENSPNAP00000013463	2248 (aa)	XP_017554759	-

Gene Model

Click here to download ENSPNAG00000019324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019324's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000019324	urb1	99	40.617	ENSG00000142207	URB1	99	40.791	Homo_sapiens
ENSPNAG00000019324	urb1	97	62.162	ENSAPOG00000020308	urb1	99	62.162	Acanthochromis_polyacanthus
ENSPNAG00000019324	urb1	99	40.203	ENSAMEG00000011998	URB1	99	40.308	Ailuropoda_melanoleuca
ENSPNAG00000019324	urb1	96	48.712	ENSACIG00000003248	urb1	97	48.759	Amphilophus_citrinellus
ENSPNAG00000019324	urb1	97	49.699	ENSAOCG00000010364	urb1	98	49.332	Amphiprion_ocellaris
ENSPNAG00000019324	urb1	99	49.272	ENSAPEG00000010758	urb1	99	49.174	Amphiprion_percula
ENSPNAG00000019324	urb1	99	49.481	ENSATEG00000011790	urb1	99	49.265	Anabas_testudineus
ENSPNAG00000019324	urb1	97	43.299	ENSAPLG00000012791	URB1	99	43.126	Anas_platyrhynchos
ENSPNAG00000019324	urb1	98	42.038	ENSACAG00000002817	URB1	99	41.714	Anolis_carolinensis
ENSPNAG00000019324	urb1	99	40.973	ENSANAG00000024617	URB1	99	41.003	Aotus_nancymaae
ENSPNAG00000019324	urb1	99	50.534	ENSACLG00000024865	urb1	99	50.198	Astatotilapia_calliptera
ENSPNAG00000019324	urb1	100	67.730	ENSAMXG00000012306	urb1	100	67.730	Astyanax_mexicanus
ENSPNAG00000019324	urb1	99	39.799	ENSBTAG00000012412	URB1	99	40.000	Bos_taurus
ENSPNAG00000019324	urb1	99	40.624	ENSCJAG00000009118	URB1	99	40.466	Callithrix_jacchus
ENSPNAG00000019324	urb1	99	40.158	ENSCAFG00000008892	URB1	99	40.202	Canis_familiaris
ENSPNAG00000019324	urb1	99	40.062	ENSCAFG00020025987	-	99	40.106	Canis_lupus_dingo
ENSPNAG00000019324	urb1	99	39.551	ENSCAFG00020025994	-	99	39.595	Canis_lupus_dingo
ENSPNAG00000019324	urb1	99	39.956	ENSCHIG00000015645	URB1	99	40.175	Capra_hircus
ENSPNAG00000019324	urb1	99	40.546	ENSTSYG00000013286	URB1	99	40.591	Carlito_syrichta
ENSPNAG00000019324	urb1	98	39.795	ENSCAPG00000015589	URB1	99	39.651	Cavia_aperea
ENSPNAG00000019324	urb1	99	40.653	ENSCPOG00000006748	URB1	99	40.608	Cavia_porcellus
ENSPNAG00000019324	urb1	99	41.003	ENSCCAG00000021299	URB1	99	40.731	Cebus_capucinus
ENSPNAG00000019324	urb1	99	40.915	ENSCATG00000042630	URB1	99	41.223	Cercocebus_atys
ENSPNAG00000019324	urb1	99	40.317	ENSCLAG00000005262	URB1	99	40.361	Chinchilla_lanigera
ENSPNAG00000019324	urb1	99	40.465	ENSCSAG00000009584	URB1	99	40.772	Chlorocebus_sabaeus
ENSPNAG00000019324	urb1	99	43.167	ENSCPBG00000006454	URB1	99	43.098	Chrysemys_picta_bellii
ENSPNAG00000019324	urb1	99	40.827	ENSCANG00000031088	URB1	99	41.135	Colobus_angolensis_palliatus
ENSPNAG00000019324	urb1	98	39.621	ENSCGRG00001010616	Urb1	99	39.398	Cricetulus_griseus_chok1gshd
ENSPNAG00000019324	urb1	98	39.591	ENSCGRG00000015840	Urb1	99	39.457	Cricetulus_griseus_crigri
ENSPNAG00000019324	urb1	97	57.838	ENSCSEG00000012616	urb1	99	57.838	Cynoglossus_semilaevis
ENSPNAG00000019324	urb1	97	48.418	ENSCVAG00000009076	urb1	99	50.107	Cyprinodon_variegatus
ENSPNAG00000019324	urb1	99	56.727	ENSDARG00000060308	urb1	100	56.595	Danio_rerio
ENSPNAG00000019324	urb1	85	43.727	ENSDNOG00000015586	URB1	99	43.727	Dasypus_novemcinctus
ENSPNAG00000019324	urb1	99	40.352	ENSDORG00000006735	Urb1	99	40.448	Dipodomys_ordii
ENSPNAG00000019324	urb1	91	52.399	ENSETEG00000009080	URB1	90	52.399	Echinops_telfairi
ENSPNAG00000019324	urb1	99	39.772	ENSEASG00005007711	URB1	99	39.702	Equus_asinus_asinus
ENSPNAG00000019324	urb1	92	48.917	ENSECAG00000013206	URB1	99	48.741	Equus_caballus
ENSPNAG00000019324	urb1	99	49.978	ENSELUG00000020516	urb1	99	50.087	Esox_lucius
ENSPNAG00000019324	urb1	99	40.822	ENSFCAG00000002177	URB1	99	40.971	Felis_catus
ENSPNAG00000019324	urb1	98	39.385	ENSFALG00000004636	URB1	99	39.281	Ficedula_albicollis
ENSPNAG00000019324	urb1	98	40.641	ENSFDAG00000007288	URB1	95	40.226	Fukomys_damarensis
ENSPNAG00000019324	urb1	99	46.323	ENSFHEG00000000202	urb1	99	46.660	Fundulus_heteroclitus
ENSPNAG00000019324	urb1	93	46.946	ENSGMOG00000001838	urb1	94	46.859	Gadus_morhua
ENSPNAG00000019324	urb1	99	42.795	ENSGALG00000015887	URB1	99	42.678	Gallus_gallus
ENSPNAG00000019324	urb1	99	48.322	ENSGAFG00000020694	urb1	98	48.265	Gambusia_affinis
ENSPNAG00000019324	urb1	99	50.642	ENSGACG00000011703	urb1	99	50.553	Gasterosteus_aculeatus
ENSPNAG00000019324	urb1	99	43.278	ENSGAGG00000022544	URB1	99	43.148	Gopherus_agassizii
ENSPNAG00000019324	urb1	99	40.799	ENSGGOG00000000285	URB1	99	40.711	Gorilla_gorilla
ENSPNAG00000019324	urb1	99	50.579	ENSHBUG00000001904	urb1	99	50.066	Haplochromis_burtoni
ENSPNAG00000019324	urb1	99	39.386	ENSHGLG00000004907	URB1	99	39.158	Heterocephalus_glaber_female
ENSPNAG00000019324	urb1	99	39.755	ENSHGLG00100010749	URB1	99	39.623	Heterocephalus_glaber_male
ENSPNAG00000019324	urb1	74	59.038	ENSHCOG00000018683	urb1	98	58.915	Hippocampus_comes
ENSPNAG00000019324	urb1	99	63.825	ENSIPUG00000014721	urb1	100	63.825	Ictalurus_punctatus
ENSPNAG00000019324	urb1	99	40.203	ENSSTOG00000004539	URB1	99	40.167	Ictidomys_tridecemlineatus
ENSPNAG00000019324	urb1	91	56.316	ENSKMAG00000006001	urb1	97	56.119	Kryptolebias_marmoratus
ENSPNAG00000019324	urb1	97	46.971	ENSLBEG00000027208	urb1	99	46.700	Labrus_bergylta
ENSPNAG00000019324	urb1	99	42.022	ENSLACG00000017059	URB1	99	42.147	Latimeria_chalumnae
ENSPNAG00000019324	urb1	99	48.375	ENSLOCG00000009190	urb1	100	47.918	Lepisosteus_oculatus
ENSPNAG00000019324	urb1	99	41.572	ENSLAFG00000010407	URB1	97	41.567	Loxodonta_africana
ENSPNAG00000019324	urb1	99	40.941	ENSMFAG00000034391	URB1	96	41.153	Macaca_fascicularis
ENSPNAG00000019324	urb1	99	40.889	ENSMMUG00000010295	URB1	99	41.241	Macaca_mulatta
ENSPNAG00000019324	urb1	99	40.185	ENSMNEG00000032981	URB1	99	40.493	Macaca_nemestrina
ENSPNAG00000019324	urb1	99	41.109	ENSMLEG00000041435	URB1	99	41.373	Mandrillus_leucophaeus
ENSPNAG00000019324	urb1	99	47.979	ENSMAMG00000011238	urb1	99	47.891	Mastacembelus_armatus
ENSPNAG00000019324	urb1	96	62.162	ENSMZEG00005011862	urb1	99	62.162	Maylandia_zebra
ENSPNAG00000019324	urb1	98	43.047	ENSMGAG00000014512	URB1	99	42.914	Meleagris_gallopavo
ENSPNAG00000019324	urb1	91	47.662	ENSMAUG00000010516	Urb1	99	47.662	Mesocricetus_auratus
ENSPNAG00000019324	urb1	99	40.382	ENSMICG00000016424	URB1	100	40.590	Microcebus_murinus
ENSPNAG00000019324	urb1	99	38.988	ENSMOCG00000012613	Urb1	99	38.690	Microtus_ochrogaster
ENSPNAG00000019324	urb1	99	40.521	ENSMODG00000021076	URB1	98	40.739	Monodelphis_domestica
ENSPNAG00000019324	urb1	99	48.197	ENSMALG00000017411	urb1	97	48.881	Monopterus_albus
ENSPNAG00000019324	urb1	99	39.661	MGP_CAROLIEiJ_G0020948	Urb1	99	39.531	Mus_caroli
ENSPNAG00000019324	urb1	99	39.634	ENSMUSG00000039929	Urb1	99	39.530	Mus_musculus
ENSPNAG00000019324	urb1	99	39.641	MGP_PahariEiJ_G0016653	Urb1	99	39.509	Mus_pahari
ENSPNAG00000019324	urb1	99	39.800	MGP_SPRETEiJ_G0021854	Urb1	99	39.582	Mus_spretus
ENSPNAG00000019324	urb1	99	40.773	ENSMPUG00000001123	URB1	99	40.853	Mustela_putorius_furo
ENSPNAG00000019324	urb1	99	39.799	ENSNGAG00000001905	Urb1	99	39.458	Nannospalax_galili
ENSPNAG00000019324	urb1	81	48.897	ENSNBRG00000001049	urb1	99	48.587	Neolamprologus_brichardi
ENSPNAG00000019324	urb1	99	39.780	ENSNLEG00000026872	URB1	99	39.824	Nomascus_leucogenys
ENSPNAG00000019324	urb1	89	54.286	ENSMEUG00000010828	URB1	95	38.604	Notamacropus_eugenii
ENSPNAG00000019324	urb1	99	39.825	ENSOPRG00000013482	URB1	99	39.754	Ochotona_princeps
ENSPNAG00000019324	urb1	99	40.131	ENSODEG00000002587	URB1	99	40.009	Octodon_degus
ENSPNAG00000019324	urb1	99	50.550	ENSONIG00000005599	urb1	99	50.418	Oreochromis_niloticus
ENSPNAG00000019324	urb1	99	40.454	ENSOCUG00000009381	URB1	99	40.472	Oryctolagus_cuniculus
ENSPNAG00000019324	urb1	99	48.464	ENSORLG00000003429	urb1	99	48.555	Oryzias_latipes
ENSPNAG00000019324	urb1	99	48.531	ENSORLG00020013785	urb1	99	48.623	Oryzias_latipes_hni
ENSPNAG00000019324	urb1	97	58.470	ENSORLG00015019421	urb1	99	58.470	Oryzias_latipes_hsok
ENSPNAG00000019324	urb1	79	60.241	ENSOMEG00000002094	urb1	98	52.515	Oryzias_melastigma
ENSPNAG00000019324	urb1	99	40.351	ENSOGAG00000017140	URB1	99	40.219	Otolemur_garnettii
ENSPNAG00000019324	urb1	94	43.082	ENSOARG00000013679	URB1	97	43.020	Ovis_aries
ENSPNAG00000019324	urb1	99	40.475	ENSPPAG00000003423	URB1	99	40.563	Pan_paniscus
ENSPNAG00000019324	urb1	99	40.516	ENSPPRG00000023131	URB1	99	40.647	Panthera_pardus
ENSPNAG00000019324	urb1	90	41.185	ENSPTIG00000016125	URB1	95	41.384	Panthera_tigris_altaica
ENSPNAG00000019324	urb1	99	40.413	ENSPTRG00000013852	URB1	99	40.545	Pan_troglodytes
ENSPNAG00000019324	urb1	99	40.889	ENSPANG00000021964	URB1	99	41.241	Papio_anubis
ENSPNAG00000019324	urb1	99	49.429	ENSPKIG00000003683	urb1	99	49.473	Paramormyrops_kingsleyae
ENSPNAG00000019324	urb1	99	39.599	ENSPEMG00000021205	Urb1	98	39.642	Peromyscus_maniculatus_bairdii
ENSPNAG00000019324	urb1	77	33.352	ENSPMAG00000009733	URB1	100	32.914	Petromyzon_marinus
ENSPNAG00000019324	urb1	99	40.822	ENSPCIG00000016350	URB1	99	41.031	Phascolarctos_cinereus
ENSPNAG00000019324	urb1	96	48.937	ENSPLAG00000004371	urb1	99	48.928	Poecilia_latipinna
ENSPNAG00000019324	urb1	99	49.343	ENSPMEG00000006634	urb1	99	49.447	Poecilia_mexicana
ENSPNAG00000019324	urb1	99	49.322	ENSPREG00000013453	urb1	99	49.469	Poecilia_reticulata
ENSPNAG00000019324	urb1	99	40.899	ENSPPYG00000011359	URB1	99	40.783	Pongo_abelii
ENSPNAG00000019324	urb1	99	36.515	ENSPCAG00000007430	URB1	99	36.392	Procavia_capensis
ENSPNAG00000019324	urb1	99	39.948	ENSPCOG00000022695	URB1	99	40.113	Propithecus_coquereli
ENSPNAG00000019324	urb1	99	39.692	ENSPVAG00000000889	URB1	99	39.833	Pteropus_vampyrus
ENSPNAG00000019324	urb1	99	49.329	ENSPNYG00000010589	urb1	99	48.852	Pundamilia_nyererei
ENSPNAG00000019324	urb1	99	39.479	ENSRNOG00000002080	Urb1	99	39.349	Rattus_norvegicus
ENSPNAG00000019324	urb1	99	40.819	ENSRBIG00000033122	URB1	99	41.083	Rhinopithecus_bieti
ENSPNAG00000019324	urb1	99	40.749	ENSRROG00000040237	URB1	99	41.013	Rhinopithecus_roxellana
ENSPNAG00000019324	urb1	99	40.650	ENSSBOG00000027672	URB1	99	40.527	Saimiri_boliviensis_boliviensis
ENSPNAG00000019324	urb1	99	40.454	ENSSHAG00000005140	URB1	98	40.762	Sarcophilus_harrisii
ENSPNAG00000019324	urb1	93	51.157	ENSSFOG00015000339	urb1	99	50.968	Scleropages_formosus
ENSPNAG00000019324	urb1	99	50.799	ENSSMAG00000003782	urb1	99	50.504	Scophthalmus_maximus
ENSPNAG00000019324	urb1	99	51.626	ENSSDUG00000012313	urb1	99	51.626	Seriola_dumerili
ENSPNAG00000019324	urb1	99	51.362	ENSSLDG00000023179	urb1	99	51.362	Seriola_lalandi_dorsalis
ENSPNAG00000019324	urb1	99	41.522	ENSSPUG00000012447	URB1	99	41.255	Sphenodon_punctatus
ENSPNAG00000019324	urb1	97	61.622	ENSSPAG00000006325	urb1	99	61.622	Stegastes_partitus
ENSPNAG00000019324	urb1	99	40.325	ENSSSCG00000032024	URB1	99	40.598	Sus_scrofa
ENSPNAG00000019324	urb1	74	44.095	ENSTGUG00000013442	URB1	100	43.798	Taeniopygia_guttata
ENSPNAG00000019324	urb1	99	50.132	ENSTRUG00000009372	urb1	99	49.737	Takifugu_rubripes
ENSPNAG00000019324	urb1	99	48.583	ENSTNIG00000016277	urb1	99	48.274	Tetraodon_nigroviridis
ENSPNAG00000019324	urb1	75	47.429	ENSTBEG00000010044	URB1	75	47.429	Tupaia_belangeri
ENSPNAG00000019324	urb1	88	45.464	ENSTTRG00000007712	URB1	92	43.988	Tursiops_truncatus
ENSPNAG00000019324	urb1	99	39.974	ENSUAMG00000012231	URB1	99	40.184	Ursus_americanus
ENSPNAG00000019324	urb1	88	41.113	ENSUMAG00000017419	URB1	94	41.532	Ursus_maritimus
ENSPNAG00000019324	urb1	64	56.000	ENSVPAG00000001164	URB1	66	56.643	Vicugna_pacos
ENSPNAG00000019324	urb1	99	40.458	ENSVVUG00000000551	URB1	99	40.502	Vulpes_vulpes
ENSPNAG00000019324	urb1	99	41.929	ENSXETG00000009895	urb1	98	42.144	Xenopus_tropicalis
ENSPNAG00000019324	urb1	98	63.243	ENSXCOG00000005500	urb1	99	63.243	Xiphophorus_couchianus
ENSPNAG00000019324	urb1	98	64.324	ENSXMAG00000007253	urb1	99	64.324	Xiphophorus_maculatus