EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000019337 (Gene tree)
Gene ID
108415362
Gene Symbol
msi1
Alias
fb40b12|wu:fb40b12|zgc:103751
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
34836 bases
Position
chrKV577245.1:3334-38169
Accession
108415362
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000031758RRM_1PF00076.221.4e-3212
ENSPNAP00000031758RRM_1PF00076.221.4e-3222
ENSPNAP00000031741RRM_1PF00076.221.1e-2712
ENSPNAP00000031741RRM_1PF00076.221.1e-2722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000021037-4187XM_017688385ENSPNAP00000031758349 (aa)XP_017543874UPI000814756E
ENSPNAT00000021018-999-ENSPNAP00000031741332 (aa)--
Gene Model
Click here to download ENSPNAG00000019337's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019337's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000019337msi110072.537ENSPNAG00000000844msi2b10072.537
ENSPNAG00000019337msi15537.824ENSPNAG00000021384HNRNPA37732.210
ENSPNAG00000019337msi16837.037ENSPNAG00000013057rbm4.25637.037
ENSPNAG00000019337msi15640.909ENSPNAG00000021630-5741.176
ENSPNAG00000019337msi15541.026ENSPNAG00000011639dazap15741.117
ENSPNAG00000019337msi15845.783ENSPNAG00000016368hnrnpd7741.736
ENSPNAG00000019337msi110072.619ENSPNAG00000014957msi2a10072.619
ENSPNAG00000019337msi15239.103ENSPNAG00000018051-7939.103
ENSPNAG00000019337msi15041.892ENSPNAG00000007752hnrnpa1a7839.326
ENSPNAG00000019337msi15246.154ENSPNAG00000016380hnrnpdl8639.300
ENSPNAG00000019337msi15446.154ENSPNAG00000000458hnrnpaba8338.929
ENSPNAG00000019337msi15344.865ENSPNAG00000028963hnrnpabb8337.692
ENSPNAG00000019337msi15038.667ENSPNAG00000022439tardbpl5039.130
ENSPNAG00000019337msi15040.909ENSPNAG00000023333HNRNPA07737.445
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000019337msi110082.597ENSG00000135097MSI19985.345Homo_sapiens
ENSPNAG00000019337msi110088.889ENSAPOG00000003191MSI110088.889Acanthochromis_polyacanthus
ENSPNAG00000019337msi110092.550ENSAPOG00000023458-10092.550Acanthochromis_polyacanthus
ENSPNAG00000019337msi19466.929ENSAMEG00000013302MSI110070.442Ailuropoda_melanoleuca
ENSPNAG00000019337msi18888.851ENSACIG00000017754-7887.162Amphilophus_citrinellus
ENSPNAG00000019337msi19483.891ENSAOCG00000009031-9584.516Amphiprion_ocellaris
ENSPNAG00000019337msi110088.889ENSAOCG00000003804MSI110088.889Amphiprion_ocellaris
ENSPNAG00000019337msi110088.889ENSAPEG00000003245MSI110088.889Amphiprion_percula
ENSPNAG00000019337msi110092.550ENSAPEG00000006857-8492.550Amphiprion_percula
ENSPNAG00000019337msi110089.014ENSATEG00000017059MSI110089.014Anabas_testudineus
ENSPNAG00000019337msi110080.845ENSATEG00000023779-10080.845Anabas_testudineus
ENSPNAG00000019337msi110082.825ENSACAG00000002762MSI110082.825Anolis_carolinensis
ENSPNAG00000019337msi110082.597ENSANAG00000027151MSI110082.597Aotus_nancymaae
ENSPNAG00000019337msi18779.801ENSANAG00000027901-9279.801Aotus_nancymaae
ENSPNAG00000019337msi110089.174ENSACLG00000011230MSI110089.174Astatotilapia_calliptera
ENSPNAG00000019337msi110093.123ENSACLG00000000117-10093.902Astatotilapia_calliptera
ENSPNAG00000019337msi19498.746ENSAMXG00000038960msi17698.746Astyanax_mexicanus
ENSPNAG00000019337msi110082.597ENSBTAG00000009800MSI110084.164Bos_taurus
ENSPNAG00000019337msi110082.597ENSCJAG00000008578MSI110082.597Callithrix_jacchus
ENSPNAG00000019337msi110082.320ENSCAFG00000010283MSI110082.320Canis_familiaris
ENSPNAG00000019337msi19484.566ENSCAFG00020020585MSI110084.566Canis_lupus_dingo
ENSPNAG00000019337msi110080.381ENSCHIG00000024304MSI110080.381Capra_hircus
ENSPNAG00000019337msi19483.486ENSTSYG00000033949MSI19583.486Carlito_syrichta
ENSPNAG00000019337msi19483.516ENSCAPG00000003919MSI17883.516Cavia_aperea
ENSPNAG00000019337msi19584.012ENSCPOG00000012361MSI110084.211Cavia_porcellus
ENSPNAG00000019337msi110082.597ENSCCAG00000035567MSI110082.597Cebus_capucinus
ENSPNAG00000019337msi110082.597ENSCATG00000030019MSI110082.597Cercocebus_atys
ENSPNAG00000019337msi19484.211ENSCLAG00000011329MSI110084.211Chinchilla_lanigera
ENSPNAG00000019337msi17883.150ENSCSAG00000002265MSI19483.150Chlorocebus_sabaeus
ENSPNAG00000019337msi110086.040ENSCPBG00000011349MSI110086.040Chrysemys_picta_bellii
ENSPNAG00000019337msi19483.537ENSCANG00000040651MSI110083.537Colobus_angolensis_palliatus
ENSPNAG00000019337msi110082.597ENSCGRG00001018883Msi110082.597Cricetulus_griseus_chok1gshd
ENSPNAG00000019337msi19483.587ENSCGRG00000002191Msi17283.587Cricetulus_griseus_crigri
ENSPNAG00000019337msi110088.604ENSCSEG00000005834-10088.604Cynoglossus_semilaevis
ENSPNAG00000019337msi19285.714ENSCSEG00000011032MSI110085.714Cynoglossus_semilaevis
ENSPNAG00000019337msi110091.404ENSCSEG00000008352-10091.404Cynoglossus_semilaevis
ENSPNAG00000019337msi110092.264ENSCVAG00000009100MSI110092.264Cyprinodon_variegatus
ENSPNAG00000019337msi15164.179ENSCVAG00000017430zgc:1107969464.179Cyprinodon_variegatus
ENSPNAG00000019337msi17672.477ENSCVAG00000017463-8972.477Cyprinodon_variegatus
ENSPNAG00000019337msi17987.963ENSDARG00000102015CABZ01037298.19887.963Danio_rerio
ENSPNAG00000019337msi18996.284ENSDARG00000010710msi110097.664Danio_rerio
ENSPNAG00000019337msi19481.962ENSDNOG00000005713MSI19181.962Dasypus_novemcinctus
ENSPNAG00000019337msi19482.934ENSDORG00000005610Msi19482.934Dipodomys_ordii
ENSPNAG00000019337msi19480.183ENSETEG00000004756MSI110080.183Echinops_telfairi
ENSPNAG00000019337msi110082.597ENSEASG00005004736MSI110082.597Equus_asinus_asinus
ENSPNAG00000019337msi110082.597ENSECAG00000017526MSI110082.597Equus_caballus
ENSPNAG00000019337msi19486.533ENSELUG00000023219MSI19286.533Esox_lucius
ENSPNAG00000019337msi19485.061ENSELUG00000023280-10084.756Esox_lucius
ENSPNAG00000019337msi110082.597ENSFCAG00000011007MSI110082.597Felis_catus
ENSPNAG00000019337msi19487.667ENSFALG00000007574MSI110087.667Ficedula_albicollis
ENSPNAG00000019337msi19483.232ENSFDAG00000019586MSI110083.232Fukomys_damarensis
ENSPNAG00000019337msi110088.889ENSFHEG00000003560-10088.889Fundulus_heteroclitus
ENSPNAG00000019337msi110092.264ENSFHEG00000022446MSI110092.264Fundulus_heteroclitus
ENSPNAG00000019337msi110079.718ENSGMOG00000017838-10079.718Gadus_morhua
ENSPNAG00000019337msi110090.258ENSGMOG00000001006MSI19989.971Gadus_morhua
ENSPNAG00000019337msi19487.023ENSGALG00000007227MSI19874.169Gallus_gallus
ENSPNAG00000019337msi110072.673ENSGAFG00000005860-10072.673Gambusia_affinis
ENSPNAG00000019337msi19489.362ENSGAFG00000021522MSI19489.362Gambusia_affinis
ENSPNAG00000019337msi110091.691ENSGACG00000012679MSI110091.691Gasterosteus_aculeatus
ENSPNAG00000019337msi110080.609ENSGACG00000008674-10080.609Gasterosteus_aculeatus
ENSPNAG00000019337msi110085.755ENSGAGG00000016037MSI110085.755Gopherus_agassizii
ENSPNAG00000019337msi19484.345ENSGGOG00000010328MSI19984.345Gorilla_gorilla
ENSPNAG00000019337msi110089.174ENSHBUG00000021921MSI110089.174Haplochromis_burtoni
ENSPNAG00000019337msi110093.123ENSHBUG00000011841-10093.123Haplochromis_burtoni
ENSPNAG00000019337msi110082.320ENSHGLG00000012782MSI110082.320Heterocephalus_glaber_female
ENSPNAG00000019337msi19483.232ENSHGLG00100016848MSI110083.232Heterocephalus_glaber_male
ENSPNAG00000019337msi19189.206ENSHCOG00000012019MSI110086.364Hippocampus_comes
ENSPNAG00000019337msi110086.119ENSHCOG00000012067-10086.119Hippocampus_comes
ENSPNAG00000019337msi110096.275ENSIPUG00000001976msi19997.987Ictalurus_punctatus
ENSPNAG00000019337msi19484.566ENSSTOG00000009799MSI110084.566Ictidomys_tridecemlineatus
ENSPNAG00000019337msi110082.597ENSJJAG00000010463Msi110082.597Jaculus_jaculus
ENSPNAG00000019337msi110070.718ENSJJAG00000010643-10072.206Jaculus_jaculus
ENSPNAG00000019337msi19287.013ENSKMAG00000019877-10087.013Kryptolebias_marmoratus
ENSPNAG00000019337msi110091.404ENSKMAG00000011251MSI110091.404Kryptolebias_marmoratus
ENSPNAG00000019337msi110088.889ENSLBEG00000001375-10088.889Labrus_bergylta
ENSPNAG00000019337msi110092.837ENSLBEG00000008789MSI110092.837Labrus_bergylta
ENSPNAG00000019337msi19483.041ENSLACG00000018287MSI110083.041Latimeria_chalumnae
ENSPNAG00000019337msi15275.455ENSLOCG00000008618zgc:1107967175.455Lepisosteus_oculatus
ENSPNAG00000019337msi19174.320ENSLAFG00000009412MSI110075.082Loxodonta_africana
ENSPNAG00000019337msi19484.211ENSMFAG00000001798MSI110084.211Macaca_fascicularis
ENSPNAG00000019337msi19484.211ENSMMUG00000031527MSI19783.333Macaca_mulatta
ENSPNAG00000019337msi110082.597ENSMNEG00000040034MSI110082.597Macaca_nemestrina
ENSPNAG00000019337msi19483.537ENSMLEG00000003921MSI110083.537Mandrillus_leucophaeus
ENSPNAG00000019337msi110092.264ENSMAMG00000002279MSI110092.264Mastacembelus_armatus
ENSPNAG00000019337msi110088.034ENSMAMG00000018426-10088.319Mastacembelus_armatus
ENSPNAG00000019337msi110089.174ENSMZEG00005026892MSI110089.174Maylandia_zebra
ENSPNAG00000019337msi110093.123ENSMZEG00005000340-10093.123Maylandia_zebra
ENSPNAG00000019337msi16691.716ENSMGAG00000016518-10091.716Meleagris_gallopavo
ENSPNAG00000019337msi17088.066ENSMAUG00000016820Msi110088.066Mesocricetus_auratus
ENSPNAG00000019337msi110082.597ENSMICG00000033181MSI110082.597Microcebus_murinus
ENSPNAG00000019337msi110082.320ENSMOCG00000002286Msi110082.320Microtus_ochrogaster
ENSPNAG00000019337msi19284.091ENSMMOG00000010492MSI19684.091Mola_mola
ENSPNAG00000019337msi110083.133ENSMMOG00000012265-10083.133Mola_mola
ENSPNAG00000019337msi19157.229ENSMODG00000003189-10057.229Monodelphis_domestica
ENSPNAG00000019337msi19489.634ENSMALG00000001426-10089.634Monopterus_albus
ENSPNAG00000019337msi110092.837ENSMALG00000017889MSI110092.837Monopterus_albus
ENSPNAG00000019337msi110082.044MGP_CAROLIEiJ_G0027626Msi19986.090Mus_caroli
ENSPNAG00000019337msi110082.044ENSMUSG00000054256Msi19986.111Mus_musculus
ENSPNAG00000019337msi110084.330MGP_PahariEiJ_G0024206Msi19985.714Mus_pahari
ENSPNAG00000019337msi110082.044MGP_SPRETEiJ_G0028624Msi19986.090Mus_spretus
ENSPNAG00000019337msi19484.566ENSMPUG00000003168MSI110084.566Mustela_putorius_furo
ENSPNAG00000019337msi19474.405ENSMLUG00000010313MSI110074.405Myotis_lucifugus
ENSPNAG00000019337msi19483.587ENSNGAG00000014508Msi19183.587Nannospalax_galili
ENSPNAG00000019337msi18783.544ENSNBRG00000018012MSI19783.544Neolamprologus_brichardi
ENSPNAG00000019337msi110093.123ENSNBRG00000000841-10093.123Neolamprologus_brichardi
ENSPNAG00000019337msi19074.085ENSNLEG00000015636MSI110074.085Nomascus_leucogenys
ENSPNAG00000019337msi19464.024ENSMEUG00000015759MSI110064.024Notamacropus_eugenii
ENSPNAG00000019337msi19176.190ENSOPRG00000016879MSI110076.190Ochotona_princeps
ENSPNAG00000019337msi19483.537ENSODEG00000006328MSI110083.537Octodon_degus
ENSPNAG00000019337msi110086.264ENSONIG00000019452-10086.264Oreochromis_niloticus
ENSPNAG00000019337msi110093.123ENSONIG00000011182MSI110093.123Oreochromis_niloticus
ENSPNAG00000019337msi19484.887ENSOCUG00000027716MSI110084.887Oryctolagus_cuniculus
ENSPNAG00000019337msi110093.123ENSORLG00000019978-10093.123Oryzias_latipes
ENSPNAG00000019337msi110087.749ENSORLG00000029593MSI110087.749Oryzias_latipes
ENSPNAG00000019337msi110087.749ENSORLG00020008266MSI19984.277Oryzias_latipes_hni
ENSPNAG00000019337msi110093.123ENSORLG00020001208-7193.123Oryzias_latipes_hni
ENSPNAG00000019337msi110093.123ENSORLG00015013672-7688.589Oryzias_latipes_hsok
ENSPNAG00000019337msi110087.749ENSORLG00015003916MSI110087.749Oryzias_latipes_hsok
ENSPNAG00000019337msi110093.410ENSOMEG00000017536MSI110093.410Oryzias_melastigma
ENSPNAG00000019337msi110088.034ENSOMEG00000002272-10088.034Oryzias_melastigma
ENSPNAG00000019337msi19980.769ENSOGAG00000003847MSI19980.769Otolemur_garnettii
ENSPNAG00000019337msi19480.909ENSOARG00000012097MSI110080.909Ovis_aries
ENSPNAG00000019337msi19483.537ENSPPAG00000043073MSI110083.537Pan_paniscus
ENSPNAG00000019337msi110082.597ENSPPRG00000000370MSI110082.597Panthera_pardus
ENSPNAG00000019337msi19484.566ENSPTIG00000008913MSI110084.566Panthera_tigris_altaica
ENSPNAG00000019337msi110082.597ENSPTRG00000005531MSI110082.597Pan_troglodytes
ENSPNAG00000019337msi110082.320ENSPANG00000006335MSI110082.320Papio_anubis
ENSPNAG00000019337msi110090.544ENSPKIG00000016497MSI110090.544Paramormyrops_kingsleyae
ENSPNAG00000019337msi110091.117ENSPKIG00000023575-10091.117Paramormyrops_kingsleyae
ENSPNAG00000019337msi17979.039ENSPSIG00000009621-10079.039Pelodiscus_sinensis
ENSPNAG00000019337msi19484.195ENSPSIG00000011608-9384.195Pelodiscus_sinensis
ENSPNAG00000019337msi15076.991ENSPSIG00000016295-9583.761Pelodiscus_sinensis
ENSPNAG00000019337msi18989.492ENSPMGG00000000514MSI19789.492Periophthalmus_magnuspinnatus
ENSPNAG00000019337msi19474.924ENSPMGG00000007743-9869.429Periophthalmus_magnuspinnatus
ENSPNAG00000019337msi19482.196ENSPEMG00000010491Msi19582.196Peromyscus_maniculatus_bairdii
ENSPNAG00000019337msi110088.319ENSPFOG00000008319-8688.319Poecilia_formosa
ENSPNAG00000019337msi110092.837ENSPFOG00000013113MSI110092.837Poecilia_formosa
ENSPNAG00000019337msi110088.319ENSPLAG00000012431-9788.319Poecilia_latipinna
ENSPNAG00000019337msi110092.837ENSPLAG00000014025-10092.837Poecilia_latipinna
ENSPNAG00000019337msi110087.749ENSPMEG00000007025-8687.749Poecilia_mexicana
ENSPNAG00000019337msi110092.837ENSPMEG00000012796MSI110092.837Poecilia_mexicana
ENSPNAG00000019337msi19090.268ENSPREG00000021416-9586.709Poecilia_reticulata
ENSPNAG00000019337msi17587.624ENSPREG00000014574-10087.624Poecilia_reticulata
ENSPNAG00000019337msi110081.768ENSPPYG00000005027MSI110081.768Pongo_abelii
ENSPNAG00000019337msi17688.832ENSPCAG00000002300MSI17288.832Procavia_capensis
ENSPNAG00000019337msi110082.597ENSPCOG00000017341MSI110082.597Propithecus_coquereli
ENSPNAG00000019337msi19468.293ENSPVAG00000002225MSI110068.293Pteropus_vampyrus
ENSPNAG00000019337msi110093.123ENSPNYG00000002529-10093.123Pundamilia_nyererei
ENSPNAG00000019337msi110089.174ENSPNYG00000004379MSI110089.174Pundamilia_nyererei
ENSPNAG00000019337msi19484.244ENSRNOG00000001156Msi110084.244Rattus_norvegicus
ENSPNAG00000019337msi19484.566ENSRBIG00000036889MSI110084.566Rhinopithecus_bieti
ENSPNAG00000019337msi19483.333ENSRROG00000041076MSI19383.333Rhinopithecus_roxellana
ENSPNAG00000019337msi19484.211ENSSBOG00000030259MSI19984.211Saimiri_boliviensis_boliviensis
ENSPNAG00000019337msi19474.510ENSSHAG00000006834MSI110074.510Sarcophilus_harrisii
ENSPNAG00000019337msi19492.097ENSSFOG00015014964-9592.097Scleropages_formosus
ENSPNAG00000019337msi19493.051ENSSFOG00015005350MSI110090.260Scleropages_formosus
ENSPNAG00000019337msi19092.953ENSSMAG00000018824MSI19892.953Scophthalmus_maximus
ENSPNAG00000019337msi19489.313ENSSMAG00000009156-7189.313Scophthalmus_maximus
ENSPNAG00000019337msi110089.174ENSSDUG00000022697-10089.174Seriola_dumerili
ENSPNAG00000019337msi110093.123ENSSDUG00000001027MSI110093.123Seriola_dumerili
ENSPNAG00000019337msi110079.710ENSSLDG00000018706-10079.710Seriola_lalandi_dorsalis
ENSPNAG00000019337msi110093.123ENSSLDG00000016832MSI110093.123Seriola_lalandi_dorsalis
ENSPNAG00000019337msi110085.470ENSSPUG00000015741MSI110085.470Sphenodon_punctatus
ENSPNAG00000019337msi15881.988ENSSPAG00000015573zgc:1107968281.988Stegastes_partitus
ENSPNAG00000019337msi19490.854ENSSPAG00000013098-10090.854Stegastes_partitus
ENSPNAG00000019337msi17581.250ENSSPAG00000014085-10081.250Stegastes_partitus
ENSPNAG00000019337msi110082.873ENSSSCG00000029365MSI110084.887Sus_scrofa
ENSPNAG00000019337msi19484.706ENSTGUG00000009534MSI110084.706Taeniopygia_guttata
ENSPNAG00000019337msi19083.000ENSTRUG00000015636-8083.000Takifugu_rubripes
ENSPNAG00000019337msi15084.536ENSTRUG00000021586-9984.536Takifugu_rubripes
ENSPNAG00000019337msi18192.130ENSTRUG00000016249MSI110082.283Takifugu_rubripes
ENSPNAG00000019337msi19960.684ENSTNIG00000019814-9960.684Tetraodon_nigroviridis
ENSPNAG00000019337msi110088.352ENSTNIG00000011469MSI110088.352Tetraodon_nigroviridis
ENSPNAG00000019337msi19474.359ENSTBEG00000007182MSI110074.359Tupaia_belangeri
ENSPNAG00000019337msi17687.970ENSTTRG00000005663MSI17887.970Tursiops_truncatus
ENSPNAG00000019337msi17187.037ENSUAMG00000015514MSI19487.037Ursus_americanus
ENSPNAG00000019337msi19381.879ENSUMAG00000006176MSI18881.879Ursus_maritimus
ENSPNAG00000019337msi19483.587ENSVVUG00000020993MSI110082.883Vulpes_vulpes
ENSPNAG00000019337msi110082.521ENSXETG00000012216msi110083.095Xenopus_tropicalis
ENSPNAG00000019337msi19472.340ENSXCOG00000017605MSI18973.701Xiphophorus_couchianus
ENSPNAG00000019337msi110092.264ENSXMAG00000027103MSI110084.384Xiphophorus_maculatus
ENSPNAG00000019337msi110088.034ENSXMAG00000018237-10088.034Xiphophorus_maculatus

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