EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000019415 (Gene tree)
Gene ID
108440650
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Minus strand
Length
16032 bases
Position
chrKV575650.1:301063-317094
Accession
108440650
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000013531RRM_1PF00076.225.3e-4613
ENSPNAP00000013531RRM_1PF00076.225.3e-4623
ENSPNAP00000013531RRM_1PF00076.225.3e-4633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000021158-1617XM_017719634ENSPNAP00000013531538 (aa)XP_017575123-
Gene Model
Click here to download ENSPNAG00000019415's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019415's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000019415puf60b5236.283ENSPNAG00000007182-6436.283
ENSPNAG00000019415puf60b9080.118ENSPNAG00000019909puf60a9981.102
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000019415puf60b9178.794ENSG00000179950PUF6010080.556Homo_sapiens
ENSPNAG00000019415puf60b9081.275ENSAPOG00000001713puf60b9881.836Acanthochromis_polyacanthus
ENSPNAG00000019415puf60b9175.095ENSAMEG00000006406PUF609971.629Ailuropoda_melanoleuca
ENSPNAG00000019415puf60b8979.922ENSACIG00000021705puf60b10080.312Amphilophus_citrinellus
ENSPNAG00000019415puf60b8972.819ENSACIG00000003263-10073.737Amphilophus_citrinellus
ENSPNAG00000019415puf60b9075.629ENSAOCG00000015558-9875.483Amphiprion_ocellaris
ENSPNAG00000019415puf60b9180.671ENSAOCG00000005395puf60b9981.225Amphiprion_ocellaris
ENSPNAG00000019415puf60b8975.403ENSAPEG00000001836-10076.471Amphiprion_percula
ENSPNAG00000019415puf60b9078.884ENSAPEG00000011923puf60b9879.441Amphiprion_percula
ENSPNAG00000019415puf60b9175.145ENSATEG00000006303-9975.577Anabas_testudineus
ENSPNAG00000019415puf60b9078.958ENSATEG00000001730puf60b9879.344Anabas_testudineus
ENSPNAG00000019415puf60b9075.475ENSAPLG00000010150PUF609977.524Anas_platyrhynchos
ENSPNAG00000019415puf60b8974.570ENSACAG00000001645PUF609975.368Anolis_carolinensis
ENSPNAG00000019415puf60b9674.101ENSANAG00000018626PUF609880.079Aotus_nancymaae
ENSPNAG00000019415puf60b8983.065ENSACLG00000004462puf60b10083.065Astatotilapia_calliptera
ENSPNAG00000019415puf60b8989.495ENSAMXG00000041030puf60b10089.495Astyanax_mexicanus
ENSPNAG00000019415puf60b9080.276ENSAMXG00000036570puf60a9881.262Astyanax_mexicanus
ENSPNAG00000019415puf60b9176.893ENSBTAG00000037493PUF609977.672Bos_taurus
ENSPNAG00000019415puf60b6752.747WBGene00004389rnp-67554.054Caenorhabditis_elegans
ENSPNAG00000019415puf60b9178.794ENSCJAG00000021485PUF609877.481Callithrix_jacchus
ENSPNAG00000019415puf60b9176.699ENSCAFG00000001400PUF609876.980Canis_familiaris
ENSPNAG00000019415puf60b9176.699ENSCAFG00020018754PUF609877.481Canis_lupus_dingo
ENSPNAG00000019415puf60b9174.436ENSCHIG00000001618PUF609174.821Capra_hircus
ENSPNAG00000019415puf60b9075.822ENSTSYG00000011912PUF6010077.927Carlito_syrichta
ENSPNAG00000019415puf60b9072.353ENSCPOG00000014613PUF609972.029Cavia_porcellus
ENSPNAG00000019415puf60b9676.623ENSCCAG00000007744PUF609877.481Cebus_capucinus
ENSPNAG00000019415puf60b9178.794ENSCATG00000035405PUF609877.481Cercocebus_atys
ENSPNAG00000019415puf60b9176.699ENSCLAG00000009154PUF609976.277Chinchilla_lanigera
ENSPNAG00000019415puf60b8977.457ENSCSAG00000008878PUF6010077.927Chlorocebus_sabaeus
ENSPNAG00000019415puf60b9074.618ENSCPBG00000005595PUF609877.333Chrysemys_picta_bellii
ENSPNAG00000019415puf60b5661.420ENSCING00000002156-8861.250Ciona_intestinalis
ENSPNAG00000019415puf60b8748.381ENSCING00000008436-9548.337Ciona_intestinalis
ENSPNAG00000019415puf60b8751.731ENSCSAVG00000001385-9951.758Ciona_savignyi
ENSPNAG00000019415puf60b8748.093ENSCSAVG00000004765-9748.734Ciona_savignyi
ENSPNAG00000019415puf60b6285.470ENSCANG00000041843PUF609876.386Colobus_angolensis_palliatus
ENSPNAG00000019415puf60b9077.668ENSCGRG00001017442Puf609976.460Cricetulus_griseus_chok1gshd
ENSPNAG00000019415puf60b9174.436ENSCGRG00000003717Puf609277.672Cricetulus_griseus_crigri
ENSPNAG00000019415puf60b9078.764ENSCSEG00000019887puf60b9278.805Cynoglossus_semilaevis
ENSPNAG00000019415puf60b8972.782ENSCSEG00000014845-8973.948Cynoglossus_semilaevis
ENSPNAG00000019415puf60b8078.652ENSCVAG00000001560-9379.287Cyprinodon_variegatus
ENSPNAG00000019415puf60b8982.460ENSCVAG00000009386puf60b10082.863Cyprinodon_variegatus
ENSPNAG00000019415puf60b8983.300ENSDARG00000001241puf60b10094.800Danio_rerio
ENSPNAG00000019415puf60b8978.462ENSDARG00000032175puf60a10084.979Danio_rerio
ENSPNAG00000019415puf60b8860.895ENSDNOG00000043278PUF609063.495Dasypus_novemcinctus
ENSPNAG00000019415puf60b9176.893ENSDORG00000004585Puf609977.164Dipodomys_ordii
ENSPNAG00000019415puf60b8263.390FBgn0028577hfp9949.541Drosophila_melanogaster
ENSPNAG00000019415puf60b8769.772ENSEBUG00000005470-9267.787Eptatretus_burgeri
ENSPNAG00000019415puf60b8759.747ENSEBUG00000014291puf60b8161.191Eptatretus_burgeri
ENSPNAG00000019415puf60b9176.699ENSEASG00005009695PUF609877.481Equus_asinus_asinus
ENSPNAG00000019415puf60b9176.699ENSECAG00000024681PUF609976.111Equus_caballus
ENSPNAG00000019415puf60b8982.236ENSELUG00000018443-10082.236Esox_lucius
ENSPNAG00000019415puf60b9077.273ENSELUG00000006507puf60b9976.909Esox_lucius
ENSPNAG00000019415puf60b9176.699ENSFCAG00000001045PUF6010077.927Felis_catus
ENSPNAG00000019415puf60b9165.666ENSFALG00000001136PUF609967.730Ficedula_albicollis
ENSPNAG00000019415puf60b9077.120ENSFDAG00000017177PUF609975.912Fukomys_damarensis
ENSPNAG00000019415puf60b8982.460ENSFHEG00000020046puf60b10082.863Fundulus_heteroclitus
ENSPNAG00000019415puf60b8575.460ENSFHEG00000021687PUF6010076.701Fundulus_heteroclitus
ENSPNAG00000019415puf60b9066.994ENSGMOG00000006392puf60b9966.928Gadus_morhua
ENSPNAG00000019415puf60b5878.779ENSGALG00000039901PUF609481.924Gallus_gallus
ENSPNAG00000019415puf60b8978.163ENSGAFG00000004334-10078.163Gambusia_affinis
ENSPNAG00000019415puf60b9278.195ENSGAFG00000021040puf60b10080.117Gambusia_affinis
ENSPNAG00000019415puf60b9168.031ENSGACG00000001484-10067.735Gasterosteus_aculeatus
ENSPNAG00000019415puf60b9067.052ENSGACG00000004717puf60b9867.052Gasterosteus_aculeatus
ENSPNAG00000019415puf60b9077.120ENSGAGG00000013289PUF609179.921Gopherus_agassizii
ENSPNAG00000019415puf60b9178.794ENSGGOG00000004646PUF609877.481Gorilla_gorilla
ENSPNAG00000019415puf60b8983.065ENSHBUG00000015118puf60b10083.065Haplochromis_burtoni
ENSPNAG00000019415puf60b8978.270ENSHBUG00000009634-10079.000Haplochromis_burtoni
ENSPNAG00000019415puf60b9077.120ENSHGLG00000006111PUF609975.912Heterocephalus_glaber_female
ENSPNAG00000019415puf60b9077.120ENSHGLG00100012362PUF609975.912Heterocephalus_glaber_male
ENSPNAG00000019415puf60b8976.641ENSHCOG00000015541puf60b10078.571Hippocampus_comes
ENSPNAG00000019415puf60b8767.623ENSHCOG00000000378-9965.753Hippocampus_comes
ENSPNAG00000019415puf60b9278.363ENSIPUG00000002453puf60a9978.947Ictalurus_punctatus
ENSPNAG00000019415puf60b8986.733ENSIPUG00000004660puf60b10086.733Ictalurus_punctatus
ENSPNAG00000019415puf60b9174.248ENSSTOG00000025037PUF609874.643Ictidomys_tridecemlineatus
ENSPNAG00000019415puf60b9176.893ENSJJAG00000001076Puf609877.164Jaculus_jaculus
ENSPNAG00000019415puf60b8973.359ENSKMAG00000010106-10073.552Kryptolebias_marmoratus
ENSPNAG00000019415puf60b8980.312ENSKMAG00000016745puf60b10080.507Kryptolebias_marmoratus
ENSPNAG00000019415puf60b9084.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSPNAG00000019415puf60b6073.547ENSLACG00000005456PUF609376.081Latimeria_chalumnae
ENSPNAG00000019415puf60b9179.655ENSLOCG00000010106puf60b9979.655Lepisosteus_oculatus
ENSPNAG00000019415puf60b9073.996ENSLAFG00000022929PUF609376.527Loxodonta_africana
ENSPNAG00000019415puf60b9178.794ENSMFAG00000043373PUF609976.880Macaca_fascicularis
ENSPNAG00000019415puf60b9178.794ENSMMUG00000013558PUF609877.481Macaca_mulatta
ENSPNAG00000019415puf60b9178.794ENSMNEG00000031099PUF609877.481Macaca_nemestrina
ENSPNAG00000019415puf60b8980.080ENSMLEG00000040009PUF6010080.556Mandrillus_leucophaeus
ENSPNAG00000019415puf60b9175.432ENSMAMG00000019476-9975.862Mastacembelus_armatus
ENSPNAG00000019415puf60b9177.885ENSMAMG00000010394puf60b9978.269Mastacembelus_armatus
ENSPNAG00000019415puf60b9175.287ENSMZEG00005019425-9976.000Maylandia_zebra
ENSPNAG00000019415puf60b8983.065ENSMZEG00005018515puf60b10083.065Maylandia_zebra
ENSPNAG00000019415puf60b9075.000ENSMGAG00000013070PUF609582.267Meleagris_gallopavo
ENSPNAG00000019415puf60b6182.421ENSMAUG00000014267-9879.587Mesocricetus_auratus
ENSPNAG00000019415puf60b8565.773ENSMAUG00000018549-9566.042Mesocricetus_auratus
ENSPNAG00000019415puf60b9672.093ENSMICG00000012226PUF609977.481Microcebus_murinus
ENSPNAG00000019415puf60b9077.668ENSMOCG00000018780Puf609976.460Microtus_ochrogaster
ENSPNAG00000019415puf60b8979.183ENSMMOG00000004217puf60b10079.183Mola_mola
ENSPNAG00000019415puf60b9071.400ENSMMOG00000018059-9976.235Mola_mola
ENSPNAG00000019415puf60b9077.470ENSMODG00000009161PUF609480.079Monodelphis_domestica
ENSPNAG00000019415puf60b9173.896ENSMALG00000000200-9973.321Monopterus_albus
ENSPNAG00000019415puf60b9072.745ENSMALG00000006797puf60b9871.961Monopterus_albus
ENSPNAG00000019415puf60b9077.318MGP_CAROLIEiJ_G0019910Puf609976.095Mus_caroli
ENSPNAG00000019415puf60b9077.318ENSMUSG00000002524Puf609976.095Mus_musculus
ENSPNAG00000019415puf60b9077.318MGP_PahariEiJ_G0019920Puf609976.095Mus_pahari
ENSPNAG00000019415puf60b9077.318MGP_SPRETEiJ_G0020812Puf609976.095Mus_spretus
ENSPNAG00000019415puf60b9174.060ENSMPUG00000008137PUF609674.464Mustela_putorius_furo
ENSPNAG00000019415puf60b9074.308ENSMLUG00000013032-9876.923Myotis_lucifugus
ENSPNAG00000019415puf60b9174.528ENSMLUG00000000238-9774.910Myotis_lucifugus
ENSPNAG00000019415puf60b9176.893ENSNGAG00000000712Puf6010078.119Nannospalax_galili
ENSPNAG00000019415puf60b9175.432ENSNBRG00000017223-9976.145Neolamprologus_brichardi
ENSPNAG00000019415puf60b7078.624ENSNBRG00000013047puf60b9579.115Neolamprologus_brichardi
ENSPNAG00000019415puf60b9178.794ENSNLEG00000002156PUF609880.079Nomascus_leucogenys
ENSPNAG00000019415puf60b6687.365ENSOPRG00000002147PUF607287.365Ochotona_princeps
ENSPNAG00000019415puf60b6593.750ENSODEG00000014024-9893.750Octodon_degus
ENSPNAG00000019415puf60b8755.599ENSODEG00000015513-9855.556Octodon_degus
ENSPNAG00000019415puf60b9079.730ENSONIG00000006247puf60b9880.116Oreochromis_niloticus
ENSPNAG00000019415puf60b9075.530ENSONIG00000014030-9876.245Oreochromis_niloticus
ENSPNAG00000019415puf60b8764.848ENSOANG00000006962PUF609864.646Ornithorhynchus_anatinus
ENSPNAG00000019415puf60b9181.621ENSORLG00000012279puf60b9981.854Oryzias_latipes
ENSPNAG00000019415puf60b8977.597ENSORLG00000028655-9978.499Oryzias_latipes
ENSPNAG00000019415puf60b9074.904ENSORLG00020018144-9975.763Oryzias_latipes_hni
ENSPNAG00000019415puf60b9178.967ENSORLG00020007333puf6010079.961Oryzias_latipes_hni
ENSPNAG00000019415puf60b9178.667ENSORLG00015007718puf60b10079.417Oryzias_latipes_hsok
ENSPNAG00000019415puf60b9074.904ENSORLG00015016833-9975.763Oryzias_latipes_hsok
ENSPNAG00000019415puf60b8982.077ENSOMEG00000001643puf60b10082.520Oryzias_melastigma
ENSPNAG00000019415puf60b9376.538ENSOMEG00000022185-9876.923Oryzias_melastigma
ENSPNAG00000019415puf60b9174.248ENSOGAG00000006259PUF609874.643Otolemur_garnettii
ENSPNAG00000019415puf60b9075.882ENSOARG00000016235PUF609877.176Ovis_aries
ENSPNAG00000019415puf60b9178.794ENSPPAG00000029933PUF609976.836Pan_paniscus
ENSPNAG00000019415puf60b8977.932ENSPPRG00000003257PUF6010080.556Panthera_pardus
ENSPNAG00000019415puf60b9079.406ENSPTIG00000009795PUF609878.077Panthera_tigris_altaica
ENSPNAG00000019415puf60b9178.599ENSPTRG00000043963-9877.290Pan_troglodytes
ENSPNAG00000019415puf60b9178.599ENSPTRG00000020670PUF609976.648Pan_troglodytes
ENSPNAG00000019415puf60b9178.794ENSPANG00000021936PUF609877.481Papio_anubis
ENSPNAG00000019415puf60b9183.730ENSPKIG00000012204puf60b9983.532Paramormyrops_kingsleyae
ENSPNAG00000019415puf60b9181.018ENSPKIG00000004295puf60a10083.929Paramormyrops_kingsleyae
ENSPNAG00000019415puf60b9074.905ENSPSIG00000004679PUF609976.952Pelodiscus_sinensis
ENSPNAG00000019415puf60b8981.048ENSPMGG00000013444puf60b10081.048Periophthalmus_magnuspinnatus
ENSPNAG00000019415puf60b9077.668ENSPEMG00000008820Puf609976.460Peromyscus_maniculatus_bairdii
ENSPNAG00000019415puf60b9276.255ENSPCIG00000020270PUF609976.792Phascolarctos_cinereus
ENSPNAG00000019415puf60b9082.236ENSPFOG00000019217puf60b9982.635Poecilia_formosa
ENSPNAG00000019415puf60b9175.000ENSPFOG00000011118-9975.240Poecilia_formosa
ENSPNAG00000019415puf60b9274.194ENSPLAG00000017025-9374.194Poecilia_latipinna
ENSPNAG00000019415puf60b8982.460ENSPLAG00000010754puf60b10082.863Poecilia_latipinna
ENSPNAG00000019415puf60b9274.335ENSPMEG00000009767-9374.573Poecilia_mexicana
ENSPNAG00000019415puf60b8982.460ENSPMEG00000000838puf60b10082.863Poecilia_mexicana
ENSPNAG00000019415puf60b8982.688ENSPREG00000005440puf60b10083.096Poecilia_reticulata
ENSPNAG00000019415puf60b6280.274ENSPPYG00000018951-9474.699Pongo_abelii
ENSPNAG00000019415puf60b6278.962ENSPCAG00000014837PUF609876.145Procavia_capensis
ENSPNAG00000019415puf60b9176.505ENSPCOG00000027981PUF609977.290Propithecus_coquereli
ENSPNAG00000019415puf60b8984.810ENSPVAG00000016167PUF608184.810Pteropus_vampyrus
ENSPNAG00000019415puf60b9175.287ENSPNYG00000004273-9976.000Pundamilia_nyererei
ENSPNAG00000019415puf60b8979.922ENSPNYG00000002556puf60b10080.312Pundamilia_nyererei
ENSPNAG00000019415puf60b9077.318ENSRNOG00000009960Puf609976.095Rattus_norvegicus
ENSPNAG00000019415puf60b9178.794ENSRBIG00000035274PUF609877.481Rhinopithecus_bieti
ENSPNAG00000019415puf60b9178.794ENSRROG00000029360PUF609877.481Rhinopithecus_roxellana
ENSPNAG00000019415puf60b9672.482ENSSBOG00000027089PUF609678.600Saimiri_boliviensis_boliviensis
ENSPNAG00000019415puf60b8072.824ENSSHAG00000006668PUF609075.636Sarcophilus_harrisii
ENSPNAG00000019415puf60b8983.299ENSSFOG00015019619puf60b10083.299Scleropages_formosus
ENSPNAG00000019415puf60b9174.270ENSSFOG00015019371puf60a9879.675Scleropages_formosus
ENSPNAG00000019415puf60b6989.899ENSSMAG00000016381puf60b7489.899Scophthalmus_maximus
ENSPNAG00000019415puf60b8775.644ENSSDUG00000007048-9775.889Seriola_dumerili
ENSPNAG00000019415puf60b8980.448ENSSDUG00000009935puf60b10080.855Seriola_dumerili
ENSPNAG00000019415puf60b9178.095ENSSLDG00000024011puf60b9979.271Seriola_lalandi_dorsalis
ENSPNAG00000019415puf60b8976.357ENSSLDG00000007366-10076.789Seriola_lalandi_dorsalis
ENSPNAG00000019415puf60b5776.970ENSSPUG00000013518PUF609276.970Sphenodon_punctatus
ENSPNAG00000019415puf60b9176.628ENSSPAG00000012144puf60b9979.079Stegastes_partitus
ENSPNAG00000019415puf60b8975.681ENSSPAG00000020285-10076.117Stegastes_partitus
ENSPNAG00000019415puf60b8977.932ENSSSCG00000038800PUF609780.556Sus_scrofa
ENSPNAG00000019415puf60b9072.275ENSTGUG00000012797-9974.713Taeniopygia_guttata
ENSPNAG00000019415puf60b9079.344ENSTRUG00000005420puf60b9979.271Takifugu_rubripes
ENSPNAG00000019415puf60b8977.172ENSTRUG00000008843-10077.172Takifugu_rubripes
ENSPNAG00000019415puf60b9072.868ENSTNIG00000003069-9972.868Tetraodon_nigroviridis
ENSPNAG00000019415puf60b9079.344ENSTNIG00000013675puf60b9979.344Tetraodon_nigroviridis
ENSPNAG00000019415puf60b5179.452ENSTBEG00000002751-9783.162Tupaia_belangeri
ENSPNAG00000019415puf60b6760.345ENSTBEG00000001899-10061.207Tupaia_belangeri
ENSPNAG00000019415puf60b8975.337ENSTTRG00000017088PUF6010076.967Tursiops_truncatus
ENSPNAG00000019415puf60b9176.699ENSUAMG00000024917PUF609877.481Ursus_americanus
ENSPNAG00000019415puf60b9174.763ENSUMAG00000000272PUF609475.047Ursus_maritimus
ENSPNAG00000019415puf60b9176.699ENSVVUG00000022527PUF6010077.927Vulpes_vulpes
ENSPNAG00000019415puf60b9077.075ENSXETG00000012469puf609979.882Xenopus_tropicalis
ENSPNAG00000019415puf60b8982.460ENSXCOG00000012355puf60b10082.863Xiphophorus_couchianus
ENSPNAG00000019415puf60b9176.634ENSXMAG00000010507-9976.786Xiphophorus_maculatus
ENSPNAG00000019415puf60b9280.777ENSXMAG00000001862puf60b10080.117Xiphophorus_maculatus

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