EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000019554 (Gene tree)
Gene ID: 108440096
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC108440096
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 9487 bases
Position: chrKV575626.1:716816-726302
Accession: 108440096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013707	Sua5_yciO_yrdC	PF01300.18	7.3e-31	1	1
ENSPNAP00000013681	Sua5_yciO_yrdC	PF01300.18	7.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000021350	-	3919	XM_017718820	ENSPNAP00000013681	885 (aa)	XP_017574309	UPI000814ABC6
ENSPNAT00000021417	-	3936	-	ENSPNAP00000013707	888 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000019554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000019554	si:ch211-153b23.4	97	68.641	ENSAPOG00000006178	si:ch211-153b23.4	97	68.641	Acanthochromis_polyacanthus
ENSPNAG00000019554	si:ch211-153b23.4	92	71.270	ENSAPOG00000006144	si:ch211-153b23.4	94	71.270	Acanthochromis_polyacanthus
ENSPNAG00000019554	si:ch211-153b23.4	94	72.859	ENSACIG00000006997	si:ch211-153b23.4	97	72.859	Amphilophus_citrinellus
ENSPNAG00000019554	si:ch211-153b23.4	58	32.258	ENSAOCG00000010974	si:ch211-153b23.3	59	32.258	Amphiprion_ocellaris
ENSPNAG00000019554	si:ch211-153b23.4	91	70.720	ENSAOCG00000010999	si:ch211-153b23.4	98	70.720	Amphiprion_ocellaris
ENSPNAG00000019554	si:ch211-153b23.4	95	70.238	ENSAPEG00000014665	si:ch211-153b23.4	98	70.238	Amphiprion_percula
ENSPNAG00000019554	si:ch211-153b23.4	58	32.000	ENSAPEG00000014700	si:ch211-153b23.3	59	32.000	Amphiprion_percula
ENSPNAG00000019554	si:ch211-153b23.4	98	72.945	ENSATEG00000004948	si:ch211-153b23.4	99	72.945	Anabas_testudineus
ENSPNAG00000019554	si:ch211-153b23.4	93	61.064	ENSAPLG00000013596	-	99	61.064	Anas_platyrhynchos
ENSPNAG00000019554	si:ch211-153b23.4	97	70.302	ENSACLG00000005471	si:ch211-153b23.4	97	70.302	Astatotilapia_calliptera
ENSPNAG00000019554	si:ch211-153b23.4	96	83.039	ENSAMXG00000013879	si:ch211-153b23.4	99	83.039	Astyanax_mexicanus
ENSPNAG00000019554	si:ch211-153b23.4	95	70.498	ENSCSEG00000014838	si:ch211-153b23.4	98	71.170	Cynoglossus_semilaevis
ENSPNAG00000019554	si:ch211-153b23.4	92	72.750	ENSCVAG00000021145	si:ch211-153b23.4	100	72.750	Cyprinodon_variegatus
ENSPNAG00000019554	si:ch211-153b23.4	58	33.141	ENSCVAG00000021124	si:ch211-153b23.3	58	33.141	Cyprinodon_variegatus
ENSPNAG00000019554	si:ch211-153b23.4	99	74.659	ENSDARG00000077169	si:ch211-153b23.4	99	74.659	Danio_rerio
ENSPNAG00000019554	si:ch211-153b23.4	97	68.366	ENSELUG00000004961	si:ch211-153b23.4	96	68.366	Esox_lucius
ENSPNAG00000019554	si:ch211-153b23.4	92	58.017	ENSFALG00000011343	-	94	58.017	Ficedula_albicollis
ENSPNAG00000019554	si:ch211-153b23.4	58	32.567	ENSFHEG00000010030	si:ch211-153b23.3	58	32.567	Fundulus_heteroclitus
ENSPNAG00000019554	si:ch211-153b23.4	83	70.386	ENSFHEG00000009888	si:ch211-153b23.4	82	70.386	Fundulus_heteroclitus
ENSPNAG00000019554	si:ch211-153b23.4	91	73.599	ENSFHEG00000010001	si:ch211-153b23.4	100	73.599	Fundulus_heteroclitus
ENSPNAG00000019554	si:ch211-153b23.4	88	71.538	ENSGAFG00000007442	si:ch211-153b23.4	93	71.538	Gambusia_affinis
ENSPNAG00000019554	si:ch211-153b23.4	58	33.459	ENSGAFG00000007455	si:ch211-153b23.3	59	33.459	Gambusia_affinis
ENSPNAG00000019554	si:ch211-153b23.4	94	71.651	ENSGACG00000018253	si:ch211-153b23.4	98	71.651	Gasterosteus_aculeatus
ENSPNAG00000019554	si:ch211-153b23.4	79	64.706	ENSGAGG00000024601	-	93	64.706	Gopherus_agassizii
ENSPNAG00000019554	si:ch211-153b23.4	76	72.889	ENSHBUG00000000013	si:ch211-153b23.4	89	72.889	Haplochromis_burtoni
ENSPNAG00000019554	si:ch211-153b23.4	95	82.241	ENSIPUG00000015205	si:ch211-153b23.4	99	82.241	Ictalurus_punctatus
ENSPNAG00000019554	si:ch211-153b23.4	95	72.447	ENSKMAG00000006919	-	96	72.447	Kryptolebias_marmoratus
ENSPNAG00000019554	si:ch211-153b23.4	92	73.716	ENSKMAG00000006829	si:ch211-153b23.4	99	73.716	Kryptolebias_marmoratus
ENSPNAG00000019554	si:ch211-153b23.4	99	71.167	ENSLBEG00000026309	si:ch211-153b23.4	99	71.167	Labrus_bergylta
ENSPNAG00000019554	si:ch211-153b23.4	59	32.184	ENSLBEG00000026324	si:ch211-153b23.3	56	32.314	Labrus_bergylta
ENSPNAG00000019554	si:ch211-153b23.4	94	64.636	ENSLACG00000017592	si:ch211-153b23.4	100	64.636	Latimeria_chalumnae
ENSPNAG00000019554	si:ch211-153b23.4	93	74.178	ENSMAMG00000009358	si:ch211-153b23.4	100	74.178	Mastacembelus_armatus
ENSPNAG00000019554	si:ch211-153b23.4	92	74.296	ENSMAMG00000009277	si:ch211-153b23.4	98	74.296	Mastacembelus_armatus
ENSPNAG00000019554	si:ch211-153b23.4	93	71.620	ENSMZEG00005011433	si:ch211-153b23.4	99	71.620	Maylandia_zebra
ENSPNAG00000019554	si:ch211-153b23.4	93	60.848	ENSMGAG00000005478	-	99	60.848	Meleagris_gallopavo
ENSPNAG00000019554	si:ch211-153b23.4	92	73.366	ENSMMOG00000004425	si:ch211-153b23.4	100	73.366	Mola_mola
ENSPNAG00000019554	si:ch211-153b23.4	90	72.466	ENSNBRG00000013392	si:ch211-153b23.4	100	72.466	Neolamprologus_brichardi
ENSPNAG00000019554	si:ch211-153b23.4	97	70.945	ENSONIG00000017875	si:ch211-153b23.4	98	70.945	Oreochromis_niloticus
ENSPNAG00000019554	si:ch211-153b23.4	98	69.275	ENSORLG00000006169	si:ch211-153b23.4	99	69.275	Oryzias_latipes
ENSPNAG00000019554	si:ch211-153b23.4	98	69.505	ENSORLG00020009905	si:ch211-153b23.4	99	69.505	Oryzias_latipes_hni
ENSPNAG00000019554	si:ch211-153b23.4	99	69.371	ENSORLG00015003709	si:ch211-153b23.4	99	69.371	Oryzias_latipes_hsok
ENSPNAG00000019554	si:ch211-153b23.4	94	72.115	ENSOMEG00000007682	si:ch211-153b23.4	98	70.616	Oryzias_melastigma
ENSPNAG00000019554	si:ch211-153b23.4	98	71.528	ENSPKIG00000025681	si:ch211-153b23.4	99	71.528	Paramormyrops_kingsleyae
ENSPNAG00000019554	si:ch211-153b23.4	100	67.119	ENSPKIG00000014429	si:ch211-153b23.4	100	67.366	Paramormyrops_kingsleyae
ENSPNAG00000019554	si:ch211-153b23.4	93	59.036	ENSPMGG00000001313	si:ch211-153b23.4	92	59.157	Periophthalmus_magnuspinnatus
ENSPNAG00000019554	si:ch211-153b23.4	79	73.759	ENSPFOG00000012164	si:ch211-153b23.4	99	73.759	Poecilia_formosa
ENSPNAG00000019554	si:ch211-153b23.4	58	33.459	ENSPFOG00000012289	si:ch211-153b23.3	59	33.459	Poecilia_formosa
ENSPNAG00000019554	si:ch211-153b23.4	58	32.892	ENSPLAG00000016320	si:ch211-153b23.3	59	32.892	Poecilia_latipinna
ENSPNAG00000019554	si:ch211-153b23.4	91	72.119	ENSPLAG00000016295	si:ch211-153b23.4	100	72.119	Poecilia_latipinna
ENSPNAG00000019554	si:ch211-153b23.4	58	32.957	ENSPMEG00000008884	si:ch211-153b23.3	59	32.957	Poecilia_mexicana
ENSPNAG00000019554	si:ch211-153b23.4	89	71.914	ENSPMEG00000007538	si:ch211-153b23.4	96	71.914	Poecilia_mexicana
ENSPNAG00000019554	si:ch211-153b23.4	93	71.498	ENSPNYG00000000250	si:ch211-153b23.4	99	71.498	Pundamilia_nyererei
ENSPNAG00000019554	si:ch211-153b23.4	99	73.160	ENSSFOG00015010891	si:ch211-153b23.4	99	73.160	Scleropages_formosus
ENSPNAG00000019554	si:ch211-153b23.4	95	70.760	ENSSFOG00015003920	-	97	70.760	Scleropages_formosus
ENSPNAG00000019554	si:ch211-153b23.4	94	73.830	ENSSMAG00000010067	si:ch211-153b23.4	96	73.830	Scophthalmus_maximus
ENSPNAG00000019554	si:ch211-153b23.4	76	71.917	ENSSDUG00000006931	si:ch211-153b23.4	92	71.917	Seriola_dumerili
ENSPNAG00000019554	si:ch211-153b23.4	92	73.613	ENSSDUG00000006671	si:ch211-153b23.4	100	73.613	Seriola_dumerili
ENSPNAG00000019554	si:ch211-153b23.4	82	72.333	ENSSDUG00000006842	si:ch211-153b23.4	91	72.333	Seriola_dumerili
ENSPNAG00000019554	si:ch211-153b23.4	92	61.369	ENSTGUG00000005499	-	99	61.369	Taeniopygia_guttata
ENSPNAG00000019554	si:ch211-153b23.4	91	72.559	ENSTRUG00000003247	si:ch211-153b23.4	99	72.559	Takifugu_rubripes
ENSPNAG00000019554	si:ch211-153b23.4	58	34.275	ENSTRUG00000020530	si:ch211-153b23.3	59	34.275	Takifugu_rubripes
ENSPNAG00000019554	si:ch211-153b23.4	93	71.429	ENSTNIG00000008958	si:ch211-153b23.4	99	71.429	Tetraodon_nigroviridis
ENSPNAG00000019554	si:ch211-153b23.4	97	54.689	ENSXETG00000004489	-	96	54.689	Xenopus_tropicalis
ENSPNAG00000019554	si:ch211-153b23.4	95	70.630	ENSXMAG00000009416	-	99	70.630	Xiphophorus_maculatus
ENSPNAG00000019554	si:ch211-153b23.4	92	72.716	ENSXMAG00000021388	si:ch211-153b23.4	99	72.530	Xiphophorus_maculatus
ENSPNAG00000019554	si:ch211-153b23.4	58	33.208	ENSXMAG00000029318	si:ch211-153b23.3	59	33.208	Xiphophorus_maculatus