EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000019686 (Gene tree)
Gene ID: 108424964
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 3101 bases
Position: chrKV575313.1:4874832-4877932
Accession: 108424964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000032004	Gar1	PF04410.14	1.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000037097	-	744	XM_017693293	ENSPNAP00000032004	247 (aa)	XP_017548782	-

Gene Model

Click here to download ENSPNAG00000019686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000019686	gar1	57	80.851	ENSAPOG00000019754	gar1	52	94.545	Acanthochromis_polyacanthus
ENSPNAG00000019686	gar1	54	86.466	ENSAMEG00000004605	GAR1	63	87.597	Ailuropoda_melanoleuca
ENSPNAG00000019686	gar1	61	84.000	ENSCHIG00000016026	-	53	90.909	Capra_hircus
ENSPNAG00000019686	gar1	81	67.133	ENSCHIG00000011049	-	55	78.182	Capra_hircus
ENSPNAG00000019686	gar1	59	51.724	ENSCSAVG00000006355	-	53	64.762	Ciona_savignyi
ENSPNAG00000019686	gar1	54	84.211	ENSCVAG00000002103	gar1	53	93.636	Cyprinodon_variegatus
ENSPNAG00000019686	gar1	68	77.381	ENSHCOG00000008656	gar1	50	93.578	Hippocampus_comes
ENSPNAG00000019686	gar1	68	79.167	ENSIPUG00000003194	gar1	52	92.727	Ictalurus_punctatus
ENSPNAG00000019686	gar1	66	77.099	ENSLACG00000003306	GAR1	89	84.375	Latimeria_chalumnae
ENSPNAG00000019686	gar1	68	76.786	ENSMMOG00000004156	gar1	52	96.262	Mola_mola
ENSPNAG00000019686	gar1	53	94.615	ENSORLG00000020583	gar1	50	96.364	Oryzias_latipes
ENSPNAG00000019686	gar1	53	68.462	ENSRBIG00000042411	-	53	74.545	Rhinopithecus_bieti
ENSPNAG00000019686	gar1	59	69.655	ENSRROG00000044348	-	53	74.545	Rhinopithecus_roxellana
ENSPNAG00000019686	gar1	68	77.976	ENSSLDG00000023264	gar1	52	93.636	Seriola_lalandi_dorsalis
ENSPNAG00000019686	gar1	58	75.000	ENSSPUG00000008707	GAR1	61	90.000	Sphenodon_punctatus
ENSPNAG00000019686	gar1	60	79.195	ENSTNIG00000013023	gar1	63	93.636	Tetraodon_nigroviridis
ENSPNAG00000019686	gar1	55	80.292	ENSUMAG00000000776	GAR1	53	91.818	Ursus_maritimus