EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000019887 (Gene tree)
Gene ID: 108428323
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 16-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2657 bases
Position: chrKV575346.1:2808582-2811238
Accession: 108428323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013982	zf-C2H2	PF00096.26	1.2e-21	1	4
ENSPNAP00000013982	zf-C2H2	PF00096.26	1.2e-21	2	4
ENSPNAP00000013982	zf-C2H2	PF00096.26	1.2e-21	3	4
ENSPNAP00000013982	zf-C2H2	PF00096.26	1.2e-21	4	4
ENSPNAP00000013982	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000021774	-	1140	XM_017699238	ENSPNAP00000013982	379 (aa)	XP_017554727	UPI000814B0BE

Gene Model

Click here to download ENSPNAG00000019887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000019887	-	61	47.619	ENSPNAG00000009741	-	91	48.750
ENSPNAG00000019887	-	59	51.064	ENSPNAG00000028765	-	83	51.064
ENSPNAG00000019887	-	68	52.727	ENSPNAG00000000066	-	65	52.727
ENSPNAG00000019887	-	92	32.629	ENSPNAG00000003616	si:dkey-7l6.3	99	32.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000019887	-	50	72.222	ENSAPOG00000022184	-	97	41.146	Acanthochromis_polyacanthus
ENSPNAG00000019887	-	52	56.410	ENSAPOG00000009709	-	53	56.410	Acanthochromis_polyacanthus
ENSPNAG00000019887	-	97	43.411	ENSAOCG00000022836	-	97	43.411	Amphiprion_ocellaris
ENSPNAG00000019887	-	97	43.411	ENSAPEG00000003776	-	97	43.411	Amphiprion_percula
ENSPNAG00000019887	-	98	52.055	ENSAMXG00000030697	-	55	52.055	Astyanax_mexicanus
ENSPNAG00000019887	-	52	43.137	ENSCVAG00000021152	-	58	43.373	Cyprinodon_variegatus
ENSPNAG00000019887	-	97	44.944	ENSFHEG00000014608	-	51	45.783	Fundulus_heteroclitus
ENSPNAG00000019887	-	52	42.857	ENSMAMG00000002083	-	94	46.789	Mastacembelus_armatus
ENSPNAG00000019887	-	98	51.818	ENSMMOG00000009252	-	88	51.818	Mola_mola
ENSPNAG00000019887	-	96	51.887	ENSSFOG00015006083	-	91	51.887	Scleropages_formosus
ENSPNAG00000019887	-	53	53.086	ENSSMAG00000013663	-	87	58.974	Scophthalmus_maximus
ENSPNAG00000019887	-	70	48.235	ENSSPAG00000008950	-	50	73.034	Stegastes_partitus
ENSPNAG00000019887	-	97	46.429	ENSSPAG00000018010	-	97	47.436	Stegastes_partitus
ENSPNAG00000019887	-	52	52.727	ENSTRUG00000021167	-	70	52.727	Takifugu_rubripes