EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000019909 (Gene tree)
Gene ID
108413493
Gene Symbol
puf60a
Alias
fc21a05|wu:fc21a05|wu:fi43a08
Full Name
poly(U)-binding-splicing factor PUF60
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
10299 bases
Position
chrKV576499.1:91844-102142
Accession
108413493
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000032166RRM_1PF00076.222.1e-4512
ENSPNAP00000032166RRM_1PF00076.222.1e-4522
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000021764-1518XM_017686024ENSPNAP00000032166505 (aa)XP_017541513-
Gene Model
Click here to download ENSPNAG00000019909's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000019909's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000019909puf60a9981.102ENSPNAG00000019415puf60b9080.118
ENSPNAG00000019909puf60a5630.814ENSPNAG00000024626pabpc1b5430.814
ENSPNAG00000019909puf60a5335.294ENSPNAG00000007182-8035.294
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000019909puf60a9985.602ENSG00000179950PUF6010085.799Homo_sapiens
ENSPNAG00000019909puf60a9988.294ENSAPOG00000001713puf60b9887.698Acanthochromis_polyacanthus
ENSPNAG00000019909puf60a9980.151ENSAMEG00000006406PUF609380.303Ailuropoda_melanoleuca
ENSPNAG00000019909puf60a9977.510ENSACIG00000003263-9977.309Amphilophus_citrinellus
ENSPNAG00000019909puf60a9985.135ENSACIG00000021705puf60b10084.913Amphilophus_citrinellus
ENSPNAG00000019909puf60a9988.294ENSAOCG00000005395puf60b9887.698Amphiprion_ocellaris
ENSPNAG00000019909puf60a9983.721ENSAOCG00000015558-9883.140Amphiprion_ocellaris
ENSPNAG00000019909puf60a9985.913ENSAPEG00000011923puf60b9885.317Amphiprion_percula
ENSPNAG00000019909puf60a9977.535ENSAPEG00000001836-9978.373Amphiprion_percula
ENSPNAG00000019909puf60a9980.814ENSATEG00000006303-9881.008Anabas_testudineus
ENSPNAG00000019909puf60a9985.249ENSATEG00000001730puf60b9885.029Anabas_testudineus
ENSPNAG00000019909puf60a9982.609ENSAPLG00000010150PUF609983.144Anas_platyrhynchos
ENSPNAG00000019909puf60a10081.835ENSACAG00000001645PUF609782.364Anolis_carolinensis
ENSPNAG00000019909puf60a10084.436ENSANAG00000018626PUF609984.630Aotus_nancymaae
ENSPNAG00000019909puf60a9988.024ENSACLG00000004462puf60b10087.625Astatotilapia_calliptera
ENSPNAG00000019909puf60a9978.947ENSAMXG00000041030puf60b10078.168Astyanax_mexicanus
ENSPNAG00000019909puf60a9999.203ENSAMXG00000036570puf60a9799.203Astyanax_mexicanus
ENSPNAG00000019909puf60a9984.766ENSBTAG00000037493PUF609982.386Bos_taurus
ENSPNAG00000019909puf60a8251.667WBGene00004389rnp-68851.623Caenorhabditis_elegans
ENSPNAG00000019909puf60a9984.961ENSCJAG00000021485PUF609982.264Callithrix_jacchus
ENSPNAG00000019909puf60a9984.961ENSCAFG00000001400PUF609385.156Canis_familiaris
ENSPNAG00000019909puf60a9984.961ENSCAFG00020018754PUF609982.264Canis_lupus_dingo
ENSPNAG00000019909puf60a9982.042ENSCHIG00000001618PUF608782.386Capra_hircus
ENSPNAG00000019909puf60a10083.174ENSTSYG00000011912PUF6010083.365Carlito_syrichta
ENSPNAG00000019909puf60a9979.845ENSCPOG00000014613PUF609479.845Cavia_porcellus
ENSPNAG00000019909puf60a9984.766ENSCCAG00000007744PUF609982.453Cebus_capucinus
ENSPNAG00000019909puf60a9984.766ENSCATG00000035405PUF609982.075Cercocebus_atys
ENSPNAG00000019909puf60a9984.961ENSCLAG00000009154PUF609285.156Chinchilla_lanigera
ENSPNAG00000019909puf60a9982.824ENSCSAG00000008878PUF6010083.174Chlorocebus_sabaeus
ENSPNAG00000019909puf60a9982.576ENSCPBG00000005595PUF609882.642Chrysemys_picta_bellii
ENSPNAG00000019909puf60a9950.566ENSCING00000008436-9849.432Ciona_intestinalis
ENSPNAG00000019909puf60a6161.830ENSCING00000002156-8761.830Ciona_intestinalis
ENSPNAG00000019909puf60a9650.816ENSCSAVG00000004765-9751.129Ciona_savignyi
ENSPNAG00000019909puf60a9653.920ENSCSAVG00000001385-9953.955Ciona_savignyi
ENSPNAG00000019909puf60a8083.293ENSCANG00000041843PUF6010081.368Colobus_angolensis_palliatus
ENSPNAG00000019909puf60a9984.766ENSCGRG00001017442Puf609284.961Cricetulus_griseus_chok1gshd
ENSPNAG00000019909puf60a9982.042ENSCGRG00000003717Puf609382.386Cricetulus_griseus_crigri
ENSPNAG00000019909puf60a9979.600ENSCSEG00000014845-8981.000Cynoglossus_semilaevis
ENSPNAG00000019909puf60a9984.866ENSCSEG00000019887puf60b9284.453Cynoglossus_semilaevis
ENSPNAG00000019909puf60a9183.836ENSCVAG00000001560-9286.395Cyprinodon_variegatus
ENSPNAG00000019909puf60a9987.500ENSCVAG00000009386puf60b10087.302Cyprinodon_variegatus
ENSPNAG00000019909puf60a9979.102ENSDARG00000001241puf60b9990.400Danio_rerio
ENSPNAG00000019909puf60a9989.333ENSDARG00000032175puf60a9988.168Danio_rerio
ENSPNAG00000019909puf60a9768.482ENSDNOG00000043278PUF607874.889Dasypus_novemcinctus
ENSPNAG00000019909puf60a9984.766ENSDORG00000004585Puf609484.961Dipodomys_ordii
ENSPNAG00000019909puf60a5865.657FBgn0028577hfp5660.252Drosophila_melanogaster
ENSPNAG00000019909puf60a9960.825ENSEBUG00000014291puf60b8463.103Eptatretus_burgeri
ENSPNAG00000019909puf60a9670.816ENSEBUG00000005470-8869.530Eptatretus_burgeri
ENSPNAG00000019909puf60a9984.961ENSEASG00005009695PUF609982.264Equus_asinus_asinus
ENSPNAG00000019909puf60a9984.961ENSECAG00000024681PUF609683.365Equus_caballus
ENSPNAG00000019909puf60a9991.833ENSELUG00000018443-9991.833Esox_lucius
ENSPNAG00000019909puf60a9982.863ENSELUG00000006507puf60b9883.271Esox_lucius
ENSPNAG00000019909puf60a9984.570ENSFCAG00000001045PUF6010082.983Felis_catus
ENSPNAG00000019909puf60a10072.693ENSFALG00000001136PUF609972.128Ficedula_albicollis
ENSPNAG00000019909puf60a9984.961ENSFDAG00000017177PUF609285.156Fukomys_damarensis
ENSPNAG00000019909puf60a9482.688ENSFHEG00000021687PUF6010082.365Fundulus_heteroclitus
ENSPNAG00000019909puf60a9987.625ENSFHEG00000020046puf60b10087.425Fundulus_heteroclitus
ENSPNAG00000019909puf60a9973.581ENSGMOG00000006392puf60b9972.211Gadus_morhua
ENSPNAG00000019909puf60a6485.174ENSGALG00000039901PUF609484.548Gallus_gallus
ENSPNAG00000019909puf60a9984.866ENSGAFG00000021040puf60b10084.720Gambusia_affinis
ENSPNAG00000019909puf60a9983.200ENSGAFG00000004334-9981.800Gambusia_affinis
ENSPNAG00000019909puf60a9971.068ENSGACG00000001484-10070.530Gasterosteus_aculeatus
ENSPNAG00000019909puf60a10073.333ENSGACG00000004717puf60b9972.710Gasterosteus_aculeatus
ENSPNAG00000019909puf60a9985.323ENSGAGG00000013289PUF609285.214Gopherus_agassizii
ENSPNAG00000019909puf60a9984.766ENSGGOG00000004646PUF609982.075Gorilla_gorilla
ENSPNAG00000019909puf60a9985.341ENSHBUG00000009634-10084.538Haplochromis_burtoni
ENSPNAG00000019909puf60a9988.024ENSHBUG00000015118puf60b10087.625Haplochromis_burtoni
ENSPNAG00000019909puf60a9984.961ENSHGLG00000006111PUF609285.156Heterocephalus_glaber_female
ENSPNAG00000019909puf60a9984.961ENSHGLG00100012362PUF609285.156Heterocephalus_glaber_male
ENSPNAG00000019909puf60a9767.589ENSHCOG00000000378-10064.366Hippocampus_comes
ENSPNAG00000019909puf60a9984.423ENSHCOG00000015541puf60b10084.808Hippocampus_comes
ENSPNAG00000019909puf60a9994.422ENSIPUG00000002453puf60a9993.625Ictalurus_punctatus
ENSPNAG00000019909puf60a9979.922ENSIPUG00000004660puf60b9978.752Ictalurus_punctatus
ENSPNAG00000019909puf60a9982.231ENSSTOG00000025037PUF609382.576Ictidomys_tridecemlineatus
ENSPNAG00000019909puf60a9984.766ENSJJAG00000001076Puf609284.961Jaculus_jaculus
ENSPNAG00000019909puf60a9984.749ENSKMAG00000016745puf60b10084.526Kryptolebias_marmoratus
ENSPNAG00000019909puf60a9978.654ENSKMAG00000010106-10077.481Kryptolebias_marmoratus
ENSPNAG00000019909puf60a9988.312ENSLBEG00000012505puf60b10088.312Labrus_bergylta
ENSPNAG00000019909puf60a7281.402ENSLACG00000005456PUF609981.522Latimeria_chalumnae
ENSPNAG00000019909puf60a9986.807ENSLOCG00000010106puf60b9886.973Lepisosteus_oculatus
ENSPNAG00000019909puf60a9981.285ENSLAFG00000022929PUF609481.629Loxodonta_africana
ENSPNAG00000019909puf60a9984.766ENSMFAG00000043373PUF609982.075Macaca_fascicularis
ENSPNAG00000019909puf60a9984.766ENSMMUG00000013558PUF609982.075Macaca_mulatta
ENSPNAG00000019909puf60a9984.766ENSMNEG00000031099PUF609982.075Macaca_nemestrina
ENSPNAG00000019909puf60a9985.602ENSMLEG00000040009PUF6010085.799Mandrillus_leucophaeus
ENSPNAG00000019909puf60a9984.971ENSMAMG00000010394puf60b9884.200Mastacembelus_armatus
ENSPNAG00000019909puf60a9982.398ENSMAMG00000019476-9882.592Mastacembelus_armatus
ENSPNAG00000019909puf60a9982.625ENSMZEG00005019425-9882.171Maylandia_zebra
ENSPNAG00000019909puf60a9988.024ENSMZEG00005018515puf60b10087.625Maylandia_zebra
ENSPNAG00000019909puf60a9982.609ENSMGAG00000013070PUF609883.144Meleagris_gallopavo
ENSPNAG00000019909puf60a9469.939ENSMAUG00000018549-9570.408Mesocricetus_auratus
ENSPNAG00000019909puf60a6787.966ENSMAUG00000014267-8987.106Mesocricetus_auratus
ENSPNAG00000019909puf60a10081.921ENSMICG00000012226PUF609982.576Microcebus_murinus
ENSPNAG00000019909puf60a9984.766ENSMOCG00000018780Puf609284.961Microtus_ochrogaster
ENSPNAG00000019909puf60a9984.749ENSMMOG00000004217puf60b10084.526Mola_mola
ENSPNAG00000019909puf60a9976.096ENSMMOG00000018059-9976.835Mola_mola
ENSPNAG00000019909puf60a9984.961ENSMODG00000009161PUF609485.156Monodelphis_domestica
ENSPNAG00000019909puf60a9977.586ENSMALG00000006797puf60b9877.351Monopterus_albus
ENSPNAG00000019909puf60a9981.783ENSMALG00000000200-9881.783Monopterus_albus
ENSPNAG00000019909puf60a9985.156MGP_CAROLIEiJ_G0019910Puf609285.352Mus_caroli
ENSPNAG00000019909puf60a9985.156ENSMUSG00000002524Puf609285.352Mus_musculus
ENSPNAG00000019909puf60a9985.156MGP_PahariEiJ_G0019920Puf609285.352Mus_pahari
ENSPNAG00000019909puf60a9985.156MGP_SPRETEiJ_G0020812Puf609285.352Mus_spretus
ENSPNAG00000019909puf60a9982.042ENSMPUG00000008137PUF609282.386Mustela_putorius_furo
ENSPNAG00000019909puf60a10081.128ENSMLUG00000013032-9980.934Myotis_lucifugus
ENSPNAG00000019909puf60a9981.474ENSMLUG00000000238-9381.818Myotis_lucifugus
ENSPNAG00000019909puf60a9984.766ENSNGAG00000000712Puf6010083.174Nannospalax_galili
ENSPNAG00000019909puf60a9982.625ENSNBRG00000017223-9882.171Neolamprologus_brichardi
ENSPNAG00000019909puf60a8281.798ENSNBRG00000013047puf60b9782.898Neolamprologus_brichardi
ENSPNAG00000019909puf60a10084.436ENSNLEG00000002156PUF609984.630Nomascus_leucogenys
ENSPNAG00000019909puf60a7088.849ENSOPRG00000002147PUF607288.087Ochotona_princeps
ENSPNAG00000019909puf60a9659.684ENSODEG00000015513-9558.893Octodon_degus
ENSPNAG00000019909puf60a7090.625ENSODEG00000014024-9090.625Octodon_degus
ENSPNAG00000019909puf60a9985.249ENSONIG00000006247puf60b9885.029Oreochromis_niloticus
ENSPNAG00000019909puf60a9982.819ENSONIG00000014030-9882.364Oreochromis_niloticus
ENSPNAG00000019909puf60a9768.627ENSOANG00000006962PUF609868.173Ornithorhynchus_anatinus
ENSPNAG00000019909puf60a9987.921ENSORLG00000012279puf60b9887.327Oryzias_latipes
ENSPNAG00000019909puf60a9979.800ENSORLG00000028655-9979.537Oryzias_latipes
ENSPNAG00000019909puf60a9985.135ENSORLG00020007333puf6010084.720Oryzias_latipes_hni
ENSPNAG00000019909puf60a9980.347ENSORLG00020018144-9880.077Oryzias_latipes_hni
ENSPNAG00000019909puf60a9980.347ENSORLG00015016833-9584.091Oryzias_latipes_hsok
ENSPNAG00000019909puf60a9984.942ENSORLG00015007718puf60b10084.526Oryzias_latipes_hsok
ENSPNAG00000019909puf60a9986.345ENSOMEG00000001643puf60b10085.341Oryzias_melastigma
ENSPNAG00000019909puf60a9984.462ENSOMEG00000022185-9683.865Oryzias_melastigma
ENSPNAG00000019909puf60a9982.231ENSOGAG00000006259PUF609382.576Otolemur_garnettii
ENSPNAG00000019909puf60a9981.034ENSOARG00000016235PUF609881.190Ovis_aries
ENSPNAG00000019909puf60a9984.766ENSPPAG00000029933PUF609982.075Pan_paniscus
ENSPNAG00000019909puf60a9985.404ENSPPRG00000003257PUF6010085.602Panthera_pardus
ENSPNAG00000019909puf60a9984.375ENSPTIG00000009795PUF609982.824Panthera_tigris_altaica
ENSPNAG00000019909puf60a9984.766ENSPTRG00000020670PUF609982.075Pan_troglodytes
ENSPNAG00000019909puf60a9984.766ENSPTRG00000043963-9882.386Pan_troglodytes
ENSPNAG00000019909puf60a9984.766ENSPANG00000021936PUF609982.075Papio_anubis
ENSPNAG00000019909puf60a9993.267ENSPKIG00000004295puf60a9989.942Paramormyrops_kingsleyae
ENSPNAG00000019909puf60a9990.693ENSPKIG00000012204puf60b9989.109Paramormyrops_kingsleyae
ENSPNAG00000019909puf60a9982.420ENSPSIG00000004679PUF609982.765Pelodiscus_sinensis
ENSPNAG00000019909puf60a9984.190ENSPMGG00000013444puf60b10083.202Periophthalmus_magnuspinnatus
ENSPNAG00000019909puf60a9984.766ENSPEMG00000008820Puf609284.961Peromyscus_maniculatus_bairdii
ENSPNAG00000019909puf60a9984.961ENSPCIG00000020270PUF609982.453Phascolarctos_cinereus
ENSPNAG00000019909puf60a9987.723ENSPFOG00000019217puf60b9987.525Poecilia_formosa
ENSPNAG00000019909puf60a9981.238ENSPFOG00000011118-9880.851Poecilia_formosa
ENSPNAG00000019909puf60a9987.625ENSPLAG00000010754puf60b10087.425Poecilia_latipinna
ENSPNAG00000019909puf60a9981.503ENSPLAG00000017025-9180.658Poecilia_latipinna
ENSPNAG00000019909puf60a9987.625ENSPMEG00000000838puf60b10087.425Poecilia_mexicana
ENSPNAG00000019909puf60a9981.625ENSPMEG00000009767-9181.238Poecilia_mexicana
ENSPNAG00000019909puf60a9985.828ENSPREG00000005440puf60b10085.629Poecilia_reticulata
ENSPNAG00000019909puf60a7979.294ENSPPYG00000018951-9579.669Pongo_abelii
ENSPNAG00000019909puf60a7980.941ENSPCAG00000014837PUF6010081.368Procavia_capensis
ENSPNAG00000019909puf60a9984.766ENSPCOG00000027981PUF609982.386Propithecus_coquereli
ENSPNAG00000019909puf60a9985.535ENSPVAG00000016167PUF608184.177Pteropus_vampyrus
ENSPNAG00000019909puf60a9985.135ENSPNYG00000002556puf60b10084.913Pundamilia_nyererei
ENSPNAG00000019909puf60a9982.625ENSPNYG00000004273-9882.171Pundamilia_nyererei
ENSPNAG00000019909puf60a9985.156ENSRNOG00000009960Puf609285.352Rattus_norvegicus
ENSPNAG00000019909puf60a9984.766ENSRBIG00000035274PUF609982.075Rhinopithecus_bieti
ENSPNAG00000019909puf60a9984.766ENSRROG00000029360PUF609982.075Rhinopithecus_roxellana
ENSPNAG00000019909puf60a9983.594ENSSBOG00000027089PUF609783.789Saimiri_boliviensis_boliviensis
ENSPNAG00000019909puf60a8980.922ENSSHAG00000006668PUF609081.303Sarcophilus_harrisii
ENSPNAG00000019909puf60a9982.411ENSSFOG00015019619puf60b10081.569Scleropages_formosus
ENSPNAG00000019909puf60a9985.793ENSSFOG00015019371puf60a9890.041Scleropages_formosus
ENSPNAG00000019909puf60a7290.909ENSSMAG00000016381puf60b7390.909Scophthalmus_maximus
ENSPNAG00000019909puf60a9985.542ENSSDUG00000009935puf60b10085.141Seriola_dumerili
ENSPNAG00000019909puf60a9880.664ENSSDUG00000007048-9781.055Seriola_dumerili
ENSPNAG00000019909puf60a9982.490ENSSLDG00000007366-9982.685Seriola_lalandi_dorsalis
ENSPNAG00000019909puf60a9985.164ENSSLDG00000024011puf60b9885.356Seriola_lalandi_dorsalis
ENSPNAG00000019909puf60a6379.154ENSSPUG00000013518PUF609278.182Sphenodon_punctatus
ENSPNAG00000019909puf60a9983.626ENSSPAG00000020285-10083.041Stegastes_partitus
ENSPNAG00000019909puf60a9985.521ENSSPAG00000012144puf60b9885.521Stegastes_partitus
ENSPNAG00000019909puf60a10084.436ENSSSCG00000038800PUF609984.630Sus_scrofa
ENSPNAG00000019909puf60a9981.714ENSTGUG00000012797-9981.298Taeniopygia_guttata
ENSPNAG00000019909puf60a9985.441ENSTRUG00000005420puf60b9884.778Takifugu_rubripes
ENSPNAG00000019909puf60a9983.735ENSTRUG00000008843-10083.534Takifugu_rubripes
ENSPNAG00000019909puf60a9985.441ENSTNIG00000013675puf60b9984.453Tetraodon_nigroviridis
ENSPNAG00000019909puf60a9978.295ENSTNIG00000003069-9978.295Tetraodon_nigroviridis
ENSPNAG00000019909puf60a7566.572ENSTBEG00000001899-10068.272Tupaia_belangeri
ENSPNAG00000019909puf60a5686.942ENSTBEG00000002751-9786.942Tupaia_belangeri
ENSPNAG00000019909puf60a9981.870ENSTTRG00000017088PUF6010082.409Tursiops_truncatus
ENSPNAG00000019909puf60a9984.961ENSUAMG00000024917PUF609982.264Ursus_americanus
ENSPNAG00000019909puf60a9977.127ENSUMAG00000000272PUF609377.273Ursus_maritimus
ENSPNAG00000019909puf60a9984.961ENSVVUG00000022527PUF6010083.365Vulpes_vulpes
ENSPNAG00000019909puf60a10082.879ENSXETG00000012469puf609983.074Xenopus_tropicalis
ENSPNAG00000019909puf60a9987.625ENSXCOG00000012355puf60b10087.425Xiphophorus_couchianus
ENSPNAG00000019909puf60a9983.466ENSXMAG00000010507-9882.470Xiphophorus_maculatus
ENSPNAG00000019909puf60a9987.723ENSXMAG00000001862puf60b10084.720Xiphophorus_maculatus

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