EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000020182 (Gene tree)
Gene ID: 108433439
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 32893 bases
Position: chrKV575421.1:205932-238824
Accession: 108433439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000014198	Suf	PF05843.14	1.5e-84	1	1
ENSPNAP00000032560	Suf	PF05843.14	1.6e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000022058	-	2895	XM_017707998	ENSPNAP00000032560	716 (aa)	XP_017563487	UPI0008142023
ENSPNAT00000022037	-	1824	-	ENSPNAP00000014198	607 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000020182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000020182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000020182	cstf3	100	92.050	ENSG00000176102	CSTF3	100	92.050	Homo_sapiens
ENSPNAG00000020182	cstf3	100	95.397	ENSAPOG00000014054	cstf3	100	95.397	Acanthochromis_polyacanthus
ENSPNAG00000020182	cstf3	99	92.525	ENSAMEG00000007187	CSTF3	98	92.525	Ailuropoda_melanoleuca
ENSPNAG00000020182	cstf3	100	82.372	ENSACIG00000005539	cstf3	100	90.064	Amphilophus_citrinellus
ENSPNAG00000020182	cstf3	100	95.397	ENSAOCG00000010930	cstf3	100	95.397	Amphiprion_ocellaris
ENSPNAG00000020182	cstf3	100	95.397	ENSAPEG00000007903	cstf3	100	95.397	Amphiprion_percula
ENSPNAG00000020182	cstf3	100	94.979	ENSATEG00000000190	cstf3	100	94.979	Anabas_testudineus
ENSPNAG00000020182	cstf3	99	92.373	ENSAPLG00000007217	CSTF3	100	92.373	Anas_platyrhynchos
ENSPNAG00000020182	cstf3	100	91.922	ENSACAG00000002823	CSTF3	100	91.922	Anolis_carolinensis
ENSPNAG00000020182	cstf3	100	92.050	ENSANAG00000020699	CSTF3	95	97.222	Aotus_nancymaae
ENSPNAG00000020182	cstf3	98	95.455	ENSACLG00000007820	cstf3	100	94.700	Astatotilapia_calliptera
ENSPNAG00000020182	cstf3	100	96.792	ENSAMXG00000014198	cstf3	100	96.792	Astyanax_mexicanus
ENSPNAG00000020182	cstf3	100	92.050	ENSBTAG00000008617	CSTF3	100	92.433	Bos_taurus
ENSPNAG00000020182	cstf3	97	47.914	WBGene00006307	suf-1	99	47.914	Caenorhabditis_elegans
ENSPNAG00000020182	cstf3	100	92.050	ENSCJAG00000005533	CSTF3	100	92.050	Callithrix_jacchus
ENSPNAG00000020182	cstf3	100	92.190	ENSCAFG00000007264	CSTF3	100	92.190	Canis_familiaris
ENSPNAG00000020182	cstf3	99	92.666	ENSCAFG00020002715	CSTF3	99	92.666	Canis_lupus_dingo
ENSPNAG00000020182	cstf3	98	91.181	ENSCHIG00000016418	CSTF3	100	91.840	Capra_hircus
ENSPNAG00000020182	cstf3	99	92.666	ENSTSYG00000000451	CSTF3	99	97.778	Carlito_syrichta
ENSPNAG00000020182	cstf3	83	89.598	ENSCAPG00000010958	CSTF3	98	89.598	Cavia_aperea
ENSPNAG00000020182	cstf3	100	91.911	ENSCPOG00000005545	CSTF3	100	92.146	Cavia_porcellus
ENSPNAG00000020182	cstf3	100	92.050	ENSCCAG00000024790	CSTF3	96	97.778	Cebus_capucinus
ENSPNAG00000020182	cstf3	100	92.050	ENSCATG00000007080	CSTF3	100	92.050	Cercocebus_atys
ENSPNAG00000020182	cstf3	100	92.050	ENSCLAG00000016179	CSTF3	100	92.050	Chinchilla_lanigera
ENSPNAG00000020182	cstf3	78	98.496	ENSCHOG00000002497	CSTF3	79	98.496	Choloepus_hoffmanni
ENSPNAG00000020182	cstf3	100	92.061	ENSCPBG00000006753	CSTF3	100	92.061	Chrysemys_picta_bellii
ENSPNAG00000020182	cstf3	99	62.079	ENSCING00000006401	-	98	62.219	Ciona_intestinalis
ENSPNAG00000020182	cstf3	98	61.744	ENSCSAVG00000004851	-	100	61.744	Ciona_savignyi
ENSPNAG00000020182	cstf3	100	92.050	ENSCANG00000035468	CSTF3	100	92.050	Colobus_angolensis_palliatus
ENSPNAG00000020182	cstf3	100	91.771	ENSCGRG00001014773	Cstf3	100	91.771	Cricetulus_griseus_chok1gshd
ENSPNAG00000020182	cstf3	100	91.771	ENSCGRG00000004142	Cstf3	100	91.771	Cricetulus_griseus_crigri
ENSPNAG00000020182	cstf3	100	94.553	ENSCSEG00000014283	cstf3	100	94.553	Cynoglossus_semilaevis
ENSPNAG00000020182	cstf3	100	93.724	ENSCVAG00000019739	cstf3	100	93.724	Cyprinodon_variegatus
ENSPNAG00000020182	cstf3	100	95.391	ENSDARG00000018904	cstf3	100	95.391	Danio_rerio
ENSPNAG00000020182	cstf3	99	92.437	ENSDNOG00000007366	CSTF3	99	92.437	Dasypus_novemcinctus
ENSPNAG00000020182	cstf3	99	85.190	ENSDORG00000005898	Cstf3	99	85.190	Dipodomys_ordii
ENSPNAG00000020182	cstf3	98	56.985	FBgn0003559	su(f)	98	56.985	Drosophila_melanogaster
ENSPNAG00000020182	cstf3	96	83.445	ENSETEG00000017097	CSTF3	90	86.604	Echinops_telfairi
ENSPNAG00000020182	cstf3	84	74.461	ENSEBUG00000015459	cstf3	96	74.461	Eptatretus_burgeri
ENSPNAG00000020182	cstf3	98	92.714	ENSEASG00005019884	CSTF3	97	97.566	Equus_asinus_asinus
ENSPNAG00000020182	cstf3	98	92.714	ENSECAG00000023338	CSTF3	97	97.566	Equus_caballus
ENSPNAG00000020182	cstf3	100	86.611	ENSEEUG00000015167	CSTF3	100	86.611	Erinaceus_europaeus
ENSPNAG00000020182	cstf3	100	93.584	ENSELUG00000023393	cstf3	100	93.584	Esox_lucius
ENSPNAG00000020182	cstf3	100	92.190	ENSFCAG00000030711	CSTF3	100	92.190	Felis_catus
ENSPNAG00000020182	cstf3	93	93.835	ENSFALG00000010764	CSTF3	100	90.783	Ficedula_albicollis
ENSPNAG00000020182	cstf3	100	92.050	ENSFDAG00000012082	CSTF3	100	92.050	Fukomys_damarensis
ENSPNAG00000020182	cstf3	100	93.166	ENSFHEG00000020623	cstf3	100	93.166	Fundulus_heteroclitus
ENSPNAG00000020182	cstf3	100	93.454	ENSGMOG00000012275	cstf3	100	93.454	Gadus_morhua
ENSPNAG00000020182	cstf3	100	91.783	ENSGALG00000011685	CSTF3	100	91.783	Gallus_gallus
ENSPNAG00000020182	cstf3	100	93.863	ENSGAFG00000002181	cstf3	100	93.863	Gambusia_affinis
ENSPNAG00000020182	cstf3	100	94.700	ENSGACG00000015997	cstf3	100	94.700	Gasterosteus_aculeatus
ENSPNAG00000020182	cstf3	100	92.201	ENSGAGG00000006200	CSTF3	100	92.201	Gopherus_agassizii
ENSPNAG00000020182	cstf3	99	86.883	ENSGGOG00000026591	CSTF3	96	92.889	Gorilla_gorilla
ENSPNAG00000020182	cstf3	98	95.455	ENSHBUG00000016656	cstf3	100	94.700	Haplochromis_burtoni
ENSPNAG00000020182	cstf3	100	92.050	ENSHGLG00000017834	CSTF3	100	92.050	Heterocephalus_glaber_female
ENSPNAG00000020182	cstf3	100	92.050	ENSHGLG00100018042	CSTF3	100	92.050	Heterocephalus_glaber_male
ENSPNAG00000020182	cstf3	98	92.057	ENSHCOG00000015218	cstf3	100	91.353	Hippocampus_comes
ENSPNAG00000020182	cstf3	100	95.112	ENSIPUG00000013170	CSTF3	100	95.112	Ictalurus_punctatus
ENSPNAG00000020182	cstf3	100	92.050	ENSSTOG00000013306	CSTF3	100	92.050	Ictidomys_tridecemlineatus
ENSPNAG00000020182	cstf3	99	82.652	ENSJJAG00000018430	Cstf3	98	82.652	Jaculus_jaculus
ENSPNAG00000020182	cstf3	100	93.305	ENSKMAG00000010916	cstf3	100	93.305	Kryptolebias_marmoratus
ENSPNAG00000020182	cstf3	100	94.282	ENSLBEG00000002306	cstf3	100	94.282	Labrus_bergylta
ENSPNAG00000020182	cstf3	100	91.899	ENSLACG00000017296	CSTF3	100	91.899	Latimeria_chalumnae
ENSPNAG00000020182	cstf3	100	94.840	ENSLOCG00000004415	cstf3	100	94.840	Lepisosteus_oculatus
ENSPNAG00000020182	cstf3	100	92.050	ENSLAFG00000008712	CSTF3	100	92.050	Loxodonta_africana
ENSPNAG00000020182	cstf3	100	92.050	ENSMFAG00000029516	CSTF3	100	92.050	Macaca_fascicularis
ENSPNAG00000020182	cstf3	100	92.050	ENSMMUG00000002542	CSTF3	100	92.050	Macaca_mulatta
ENSPNAG00000020182	cstf3	100	92.050	ENSMNEG00000021807	CSTF3	100	92.050	Macaca_nemestrina
ENSPNAG00000020182	cstf3	100	92.050	ENSMLEG00000039594	CSTF3	97	95.556	Mandrillus_leucophaeus
ENSPNAG00000020182	cstf3	100	94.979	ENSMAMG00000020423	cstf3	100	94.979	Mastacembelus_armatus
ENSPNAG00000020182	cstf3	98	95.455	ENSMZEG00005012082	cstf3	100	94.700	Maylandia_zebra
ENSPNAG00000020182	cstf3	100	91.643	ENSMGAG00000001383	CSTF3	100	91.643	Meleagris_gallopavo
ENSPNAG00000020182	cstf3	100	91.632	ENSMAUG00000002487	Cstf3	100	91.632	Mesocricetus_auratus
ENSPNAG00000020182	cstf3	100	92.050	ENSMICG00000004784	CSTF3	100	92.050	Microcebus_murinus
ENSPNAG00000020182	cstf3	100	91.771	ENSMOCG00000017583	Cstf3	100	91.771	Microtus_ochrogaster
ENSPNAG00000020182	cstf3	99	94.625	ENSMMOG00000016026	cstf3	94	94.625	Mola_mola
ENSPNAG00000020182	cstf3	100	79.916	ENSMODG00000025205	-	100	79.916	Monodelphis_domestica
ENSPNAG00000020182	cstf3	100	91.771	ENSMODG00000009745	-	100	91.771	Monodelphis_domestica
ENSPNAG00000020182	cstf3	100	94.700	ENSMALG00000012050	cstf3	100	94.700	Monopterus_albus
ENSPNAG00000020182	cstf3	100	91.771	MGP_CAROLIEiJ_G0024026	Cstf3	100	91.771	Mus_caroli
ENSPNAG00000020182	cstf3	100	91.771	ENSMUSG00000027176	Cstf3	100	91.771	Mus_musculus
ENSPNAG00000020182	cstf3	100	91.771	MGP_PahariEiJ_G0025464	Cstf3	100	91.771	Mus_pahari
ENSPNAG00000020182	cstf3	100	91.771	MGP_SPRETEiJ_G0024939	Cstf3	100	91.771	Mus_spretus
ENSPNAG00000020182	cstf3	100	92.050	ENSMPUG00000011457	CSTF3	100	92.050	Mustela_putorius_furo
ENSPNAG00000020182	cstf3	100	89.400	ENSMLUG00000026022	-	100	89.400	Myotis_lucifugus
ENSPNAG00000020182	cstf3	99	92.666	ENSMLUG00000003073	-	99	92.666	Myotis_lucifugus
ENSPNAG00000020182	cstf3	100	91.632	ENSNGAG00000010677	Cstf3	100	91.632	Nannospalax_galili
ENSPNAG00000020182	cstf3	100	87.340	ENSNBRG00000007345	cstf3	100	95.032	Neolamprologus_brichardi
ENSPNAG00000020182	cstf3	100	92.050	ENSNLEG00000017901	CSTF3	97	95.333	Nomascus_leucogenys
ENSPNAG00000020182	cstf3	73	90.822	ENSMEUG00000005640	-	100	90.822	Notamacropus_eugenii
ENSPNAG00000020182	cstf3	67	90.667	ENSOPRG00000000199	-	67	90.667	Ochotona_princeps
ENSPNAG00000020182	cstf3	100	91.911	ENSODEG00000016737	-	100	91.911	Octodon_degus
ENSPNAG00000020182	cstf3	99	73.871	ENSODEG00000006311	-	97	79.717	Octodon_degus
ENSPNAG00000020182	cstf3	98	95.455	ENSONIG00000005563	cstf3	100	94.700	Oreochromis_niloticus
ENSPNAG00000020182	cstf3	100	84.051	ENSOANG00000015140	CSTF3	100	90.923	Ornithorhynchus_anatinus
ENSPNAG00000020182	cstf3	100	91.771	ENSOCUG00000015417	CSTF3	100	91.771	Oryctolagus_cuniculus
ENSPNAG00000020182	cstf3	100	92.179	ENSORLG00000009762	cstf3	100	92.179	Oryzias_latipes
ENSPNAG00000020182	cstf3	100	92.179	ENSORLG00020005540	cstf3	100	92.179	Oryzias_latipes_hni
ENSPNAG00000020182	cstf3	100	92.039	ENSORLG00015003551	cstf3	100	92.039	Oryzias_latipes_hsok
ENSPNAG00000020182	cstf3	100	93.156	ENSOMEG00000003848	cstf3	100	93.156	Oryzias_melastigma
ENSPNAG00000020182	cstf3	100	91.528	ENSOGAG00000010229	CSTF3	100	91.528	Otolemur_garnettii
ENSPNAG00000020182	cstf3	100	84.480	ENSOARG00000017271	CSTF3	99	91.913	Ovis_aries
ENSPNAG00000020182	cstf3	99	89.281	ENSPPAG00000027358	CSTF3	99	89.281	Pan_paniscus
ENSPNAG00000020182	cstf3	100	92.190	ENSPPRG00000016852	CSTF3	100	92.190	Panthera_pardus
ENSPNAG00000020182	cstf3	100	92.190	ENSPTIG00000008716	CSTF3	100	92.190	Panthera_tigris_altaica
ENSPNAG00000020182	cstf3	100	92.050	ENSPTRG00000003485	CSTF3	100	92.050	Pan_troglodytes
ENSPNAG00000020182	cstf3	100	92.050	ENSPANG00000013722	CSTF3	97	95.556	Papio_anubis
ENSPNAG00000020182	cstf3	100	94.413	ENSPKIG00000023648	cstf3	100	94.413	Paramormyrops_kingsleyae
ENSPNAG00000020182	cstf3	100	92.061	ENSPSIG00000009173	CSTF3	100	92.061	Pelodiscus_sinensis
ENSPNAG00000020182	cstf3	76	96.709	ENSPMGG00000000164	cstf3	99	96.709	Periophthalmus_magnuspinnatus
ENSPNAG00000020182	cstf3	100	91.771	ENSPEMG00000011481	Cstf3	100	91.771	Peromyscus_maniculatus_bairdii
ENSPNAG00000020182	cstf3	99	79.073	ENSPMAG00000007282	cstf3	99	79.213	Petromyzon_marinus
ENSPNAG00000020182	cstf3	100	76.880	ENSPCIG00000030419	-	90	77.159	Phascolarctos_cinereus
ENSPNAG00000020182	cstf3	99	89.859	ENSPCIG00000026406	-	100	91.200	Phascolarctos_cinereus
ENSPNAG00000020182	cstf3	100	94.142	ENSPFOG00000017239	cstf3	100	94.142	Poecilia_formosa
ENSPNAG00000020182	cstf3	100	94.142	ENSPLAG00000009456	cstf3	100	94.142	Poecilia_latipinna
ENSPNAG00000020182	cstf3	100	94.142	ENSPMEG00000010320	cstf3	100	94.142	Poecilia_mexicana
ENSPNAG00000020182	cstf3	100	94.003	ENSPREG00000013549	cstf3	100	94.003	Poecilia_reticulata
ENSPNAG00000020182	cstf3	100	92.050	ENSPPYG00000003375	CSTF3	100	92.050	Pongo_abelii
ENSPNAG00000020182	cstf3	71	96.864	ENSPCAG00000008025	-	71	96.864	Procavia_capensis
ENSPNAG00000020182	cstf3	100	86.890	ENSPCOG00000014417	CSTF3	100	86.890	Propithecus_coquereli
ENSPNAG00000020182	cstf3	100	87.029	ENSPVAG00000002350	CSTF3	100	87.029	Pteropus_vampyrus
ENSPNAG00000020182	cstf3	98	95.455	ENSPNYG00000018259	cstf3	100	94.700	Pundamilia_nyererei
ENSPNAG00000020182	cstf3	100	84.000	ENSRNOG00000012089	Cstf3	100	91.360	Rattus_norvegicus
ENSPNAG00000020182	cstf3	99	91.255	ENSRBIG00000044258	CSTF3	100	91.840	Rhinopithecus_bieti
ENSPNAG00000020182	cstf3	100	92.050	ENSRROG00000043450	CSTF3	100	92.050	Rhinopithecus_roxellana
ENSPNAG00000020182	cstf3	100	92.050	ENSSBOG00000024764	CSTF3	98	97.778	Saimiri_boliviensis_boliviensis
ENSPNAG00000020182	cstf3	100	82.148	ENSSHAG00000003135	-	99	82.148	Sarcophilus_harrisii
ENSPNAG00000020182	cstf3	100	91.353	ENSSHAG00000018128	-	100	91.353	Sarcophilus_harrisii
ENSPNAG00000020182	cstf3	100	94.274	ENSSFOG00015022133	cstf3	100	94.274	Scleropages_formosus
ENSPNAG00000020182	cstf3	100	94.840	ENSSMAG00000002197	cstf3	100	94.840	Scophthalmus_maximus
ENSPNAG00000020182	cstf3	100	95.258	ENSSDUG00000020426	cstf3	100	95.258	Seriola_dumerili
ENSPNAG00000020182	cstf3	100	95.119	ENSSLDG00000025649	cstf3	100	95.119	Seriola_lalandi_dorsalis
ENSPNAG00000020182	cstf3	100	91.632	ENSSARG00000000391	CSTF3	100	91.632	Sorex_araneus
ENSPNAG00000020182	cstf3	96	91.896	ENSSPUG00000010546	CSTF3	100	91.896	Sphenodon_punctatus
ENSPNAG00000020182	cstf3	100	95.537	ENSSPAG00000004958	cstf3	100	95.537	Stegastes_partitus
ENSPNAG00000020182	cstf3	99	91.620	ENSSSCG00000040954	CSTF3	100	91.620	Sus_scrofa
ENSPNAG00000020182	cstf3	99	91.949	ENSTGUG00000005010	CSTF3	100	91.949	Taeniopygia_guttata
ENSPNAG00000020182	cstf3	100	93.863	ENSTRUG00000004959	cstf3	100	93.863	Takifugu_rubripes
ENSPNAG00000020182	cstf3	99	94.093	ENSTNIG00000013811	cstf3	99	94.093	Tetraodon_nigroviridis
ENSPNAG00000020182	cstf3	100	81.600	ENSTBEG00000001544	CSTF3	90	89.252	Tupaia_belangeri
ENSPNAG00000020182	cstf3	100	89.121	ENSTTRG00000016366	CSTF3	100	89.121	Tursiops_truncatus
ENSPNAG00000020182	cstf3	99	92.384	ENSUMAG00000018971	CSTF3	100	91.520	Ursus_maritimus
ENSPNAG00000020182	cstf3	100	91.911	ENSVPAG00000007800	CSTF3	100	91.911	Vicugna_pacos
ENSPNAG00000020182	cstf3	99	92.666	ENSVVUG00000014938	CSTF3	100	91.840	Vulpes_vulpes
ENSPNAG00000020182	cstf3	97	72.787	ENSXETG00000021399	cstf3	100	77.023	Xenopus_tropicalis
ENSPNAG00000020182	cstf3	66	43.093	ENSXETG00000017946	-	99	43.093	Xenopus_tropicalis
ENSPNAG00000020182	cstf3	100	86.378	ENSXCOG00000011741	cstf3	100	94.071	Xiphophorus_couchianus
ENSPNAG00000020182	cstf3	100	94.142	ENSXMAG00000009545	cstf3	100	94.142	Xiphophorus_maculatus