EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000020260 (Gene tree)
Gene ID: 108429539
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: protein strawberry notch homolog 2-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 81725 bases
Position: chrKV575360.1:1879112-1960836
Accession: 108429539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000014302	ResIII	PF04851.15	6.8e-08	1	1
ENSPNAP00000014335	ResIII	PF04851.15	6.9e-08	1	1
ENSPNAP00000032369	ResIII	PF04851.15	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000022237	-	4800	XM_017701355	ENSPNAP00000032369	1440 (aa)	XP_017556844	UPI0008145E36
ENSPNAT00000022187	-	4529	XM_017701358	ENSPNAP00000014302	1364 (aa)	XP_017556847	UPI0008148BBB
ENSPNAT00000022179	-	4194	XM_017701357	ENSPNAP00000014335	1368 (aa)	XP_017556846	UPI0008148A29

Gene Model

Click here to download ENSPNAG00000020260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000020260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000020260	si:ch73-63e15.2	74	60.511	ENSPNAG00000015622	sbno1	69	67.206
ENSPNAG00000020260	si:ch73-63e15.2	84	79.481	ENSPNAG00000026609	sbno2a	99	70.309

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000020260	si:ch73-63e15.2	83	69.013	ENSG00000064932	SBNO2	88	69.031	Homo_sapiens
ENSPNAG00000020260	si:ch73-63e15.2	87	80.613	ENSAPOG00000003185	si:ch73-63e15.2	91	79.470	Acanthochromis_polyacanthus
ENSPNAG00000020260	si:ch73-63e15.2	86	82.561	ENSAOCG00000016581	si:ch73-63e15.2	93	83.263	Amphiprion_ocellaris
ENSPNAG00000020260	si:ch73-63e15.2	86	82.645	ENSAPEG00000008862	si:ch73-63e15.2	79	82.645	Amphiprion_percula
ENSPNAG00000020260	si:ch73-63e15.2	84	82.891	ENSATEG00000023838	si:ch73-63e15.2	99	78.689	Anabas_testudineus
ENSPNAG00000020260	si:ch73-63e15.2	82	72.610	ENSAPLG00000007158	SBNO2	90	71.983	Anas_platyrhynchos
ENSPNAG00000020260	si:ch73-63e15.2	84	68.601	ENSANAG00000026685	SBNO2	93	65.997	Aotus_nancymaae
ENSPNAG00000020260	si:ch73-63e15.2	89	77.635	ENSACLG00000005090	si:ch73-63e15.2	83	76.039	Astatotilapia_calliptera
ENSPNAG00000020260	si:ch73-63e15.2	97	71.269	ENSAMXG00000018868	sbno2a	98	78.637	Astyanax_mexicanus
ENSPNAG00000020260	si:ch73-63e15.2	100	85.974	ENSAMXG00000015881	si:ch73-63e15.2	99	85.860	Astyanax_mexicanus
ENSPNAG00000020260	si:ch73-63e15.2	83	69.013	ENSBTAG00000020780	SBNO2	88	69.151	Bos_taurus
ENSPNAG00000020260	si:ch73-63e15.2	82	69.486	ENSCAFG00000019543	SBNO2	90	66.267	Canis_familiaris
ENSPNAG00000020260	si:ch73-63e15.2	82	69.486	ENSCAFG00020017115	SBNO2	96	66.267	Canis_lupus_dingo
ENSPNAG00000020260	si:ch73-63e15.2	82	69.531	ENSCHIG00000026127	SBNO2	90	66.133	Capra_hircus
ENSPNAG00000020260	si:ch73-63e15.2	81	67.748	ENSCAPG00000005731	SBNO2	94	67.748	Cavia_aperea
ENSPNAG00000020260	si:ch73-63e15.2	82	67.391	ENSCPOG00000007477	SBNO2	86	67.476	Cavia_porcellus
ENSPNAG00000020260	si:ch73-63e15.2	84	68.771	ENSCCAG00000037518	SBNO2	90	68.739	Cebus_capucinus
ENSPNAG00000020260	si:ch73-63e15.2	83	68.942	ENSCATG00000037046	SBNO2	89	68.574	Cercocebus_atys
ENSPNAG00000020260	si:ch73-63e15.2	83	69.111	ENSCLAG00000010178	SBNO2	99	69.251	Chinchilla_lanigera
ENSPNAG00000020260	si:ch73-63e15.2	83	68.686	ENSCSAG00000012317	SBNO2	90	65.947	Chlorocebus_sabaeus
ENSPNAG00000020260	si:ch73-63e15.2	82	69.939	ENSCPBG00000008920	SBNO2	91	69.926	Chrysemys_picta_bellii
ENSPNAG00000020260	si:ch73-63e15.2	79	68.962	ENSCANG00000036745	SBNO2	96	68.901	Colobus_angolensis_palliatus
ENSPNAG00000020260	si:ch73-63e15.2	82	67.247	ENSCGRG00001023960	Sbno2	90	64.401	Cricetulus_griseus_chok1gshd
ENSPNAG00000020260	si:ch73-63e15.2	82	68.494	ENSCGRG00000011984	Sbno2	90	65.590	Cricetulus_griseus_crigri
ENSPNAG00000020260	si:ch73-63e15.2	86	76.865	ENSCSEG00000006856	si:ch73-63e15.2	94	82.214	Cynoglossus_semilaevis
ENSPNAG00000020260	si:ch73-63e15.2	91	75.915	ENSCVAG00000005663	si:ch73-63e15.2	88	75.915	Cyprinodon_variegatus
ENSPNAG00000020260	si:ch73-63e15.2	91	72.514	ENSDARG00000098801	sbno2a	96	71.991	Danio_rerio
ENSPNAG00000020260	si:ch73-63e15.2	100	73.658	ENSDARG00000016188	SBNO2	89	78.681	Danio_rerio
ENSPNAG00000020260	si:ch73-63e15.2	82	69.599	ENSDORG00000002916	Sbno2	91	66.479	Dipodomys_ordii
ENSPNAG00000020260	si:ch73-63e15.2	83	68.675	ENSEASG00005021621	SBNO2	89	68.986	Equus_asinus_asinus
ENSPNAG00000020260	si:ch73-63e15.2	83	68.589	ENSECAG00000011827	SBNO2	89	68.986	Equus_caballus
ENSPNAG00000020260	si:ch73-63e15.2	100	71.790	ENSELUG00000020457	si:ch73-63e15.2	90	77.099	Esox_lucius
ENSPNAG00000020260	si:ch73-63e15.2	83	71.880	ENSFALG00000013988	SBNO2	92	67.877	Ficedula_albicollis
ENSPNAG00000020260	si:ch73-63e15.2	80	67.229	ENSFDAG00000015186	SBNO2	86	67.082	Fukomys_damarensis
ENSPNAG00000020260	si:ch73-63e15.2	85	81.586	ENSFHEG00000022262	si:ch73-63e15.2	88	75.227	Fundulus_heteroclitus
ENSPNAG00000020260	si:ch73-63e15.2	82	82.076	ENSGMOG00000007542	si:ch73-63e15.2	95	82.076	Gadus_morhua
ENSPNAG00000020260	si:ch73-63e15.2	84	72.288	ENSGALG00000037522	SBNO2	85	71.586	Gallus_gallus
ENSPNAG00000020260	si:ch73-63e15.2	85	80.799	ENSGAFG00000004860	si:ch73-63e15.2	93	82.137	Gambusia_affinis
ENSPNAG00000020260	si:ch73-63e15.2	82	81.723	ENSGACG00000013190	si:ch73-63e15.2	95	81.732	Gasterosteus_aculeatus
ENSPNAG00000020260	si:ch73-63e15.2	84	72.265	ENSGAGG00000008348	SBNO2	87	71.562	Gopherus_agassizii
ENSPNAG00000020260	si:ch73-63e15.2	89	77.858	ENSHBUG00000010742	si:ch73-63e15.2	82	78.180	Haplochromis_burtoni
ENSPNAG00000020260	si:ch73-63e15.2	82	68.996	ENSHGLG00000008739	SBNO2	91	65.020	Heterocephalus_glaber_female
ENSPNAG00000020260	si:ch73-63e15.2	83	68.557	ENSHGLG00100005269	SBNO2	99	68.690	Heterocephalus_glaber_male
ENSPNAG00000020260	si:ch73-63e15.2	88	76.615	ENSHCOG00000000884	si:ch73-63e15.2	98	73.668	Hippocampus_comes
ENSPNAG00000020260	si:ch73-63e15.2	100	80.739	ENSIPUG00000000537	si:ch73-63e15.2	99	81.060	Ictalurus_punctatus
ENSPNAG00000020260	si:ch73-63e15.2	84	79.352	ENSIPUG00000019672	sbno2	99	75.965	Ictalurus_punctatus
ENSPNAG00000020260	si:ch73-63e15.2	82	68.527	ENSSTOG00000025832	SBNO2	88	67.382	Ictidomys_tridecemlineatus
ENSPNAG00000020260	si:ch73-63e15.2	82	66.061	ENSJJAG00000017397	Sbno2	91	63.775	Jaculus_jaculus
ENSPNAG00000020260	si:ch73-63e15.2	86	81.197	ENSKMAG00000005541	si:ch73-63e15.2	80	80.285	Kryptolebias_marmoratus
ENSPNAG00000020260	si:ch73-63e15.2	86	80.952	ENSLBEG00000025016	si:ch73-63e15.2	97	82.458	Labrus_bergylta
ENSPNAG00000020260	si:ch73-63e15.2	99	74.799	ENSLOCG00000004643	si:ch73-63e15.2	90	79.355	Lepisosteus_oculatus
ENSPNAG00000020260	si:ch73-63e15.2	80	66.307	ENSLAFG00000008824	SBNO2	96	62.643	Loxodonta_africana
ENSPNAG00000020260	si:ch73-63e15.2	83	67.720	ENSMFAG00000040030	SBNO2	91	67.720	Macaca_fascicularis
ENSPNAG00000020260	si:ch73-63e15.2	83	68.596	ENSMMUG00000010886	SBNO2	88	68.142	Macaca_mulatta
ENSPNAG00000020260	si:ch73-63e15.2	84	68.421	ENSMNEG00000039927	SBNO2	89	68.857	Macaca_nemestrina
ENSPNAG00000020260	si:ch73-63e15.2	76	69.537	ENSMLEG00000038556	SBNO2	98	66.696	Mandrillus_leucophaeus
ENSPNAG00000020260	si:ch73-63e15.2	84	82.806	ENSMAMG00000018758	si:ch73-63e15.2	76	82.806	Mastacembelus_armatus
ENSPNAG00000020260	si:ch73-63e15.2	89	77.778	ENSMZEG00005010682	si:ch73-63e15.2	83	76.172	Maylandia_zebra
ENSPNAG00000020260	si:ch73-63e15.2	83	72.355	ENSMGAG00000003801	SBNO2	90	71.734	Meleagris_gallopavo
ENSPNAG00000020260	si:ch73-63e15.2	83	68.362	ENSMAUG00000008034	Sbno2	95	63.498	Mesocricetus_auratus
ENSPNAG00000020260	si:ch73-63e15.2	89	66.371	ENSMICG00000013071	SBNO2	93	66.450	Microcebus_murinus
ENSPNAG00000020260	si:ch73-63e15.2	83	68.675	ENSMOCG00000010504	Sbno2	91	65.969	Microtus_ochrogaster
ENSPNAG00000020260	si:ch73-63e15.2	83	70.421	ENSMODG00000005382	SBNO2	90	66.057	Monodelphis_domestica
ENSPNAG00000020260	si:ch73-63e15.2	68	76.890	ENSMALG00000021831	si:ch73-63e15.2	97	76.101	Monopterus_albus
ENSPNAG00000020260	si:ch73-63e15.2	83	68.103	ENSMUSG00000035673	Sbno2	99	65.966	Mus_musculus
ENSPNAG00000020260	si:ch73-63e15.2	83	68.103	MGP_PahariEiJ_G0030976	Sbno2	90	65.804	Mus_pahari
ENSPNAG00000020260	si:ch73-63e15.2	83	68.362	MGP_SPRETEiJ_G0016381	Sbno2	97	66.047	Mus_spretus
ENSPNAG00000020260	si:ch73-63e15.2	70	71.602	ENSMPUG00000008747	SBNO2	99	67.128	Mustela_putorius_furo
ENSPNAG00000020260	si:ch73-63e15.2	82	68.210	ENSNGAG00000004308	Sbno2	93	64.815	Nannospalax_galili
ENSPNAG00000020260	si:ch73-63e15.2	79	82.466	ENSNBRG00000022968	si:ch73-63e15.2	97	85.954	Neolamprologus_brichardi
ENSPNAG00000020260	si:ch73-63e15.2	79	67.290	ENSNLEG00000001305	SBNO2	90	67.290	Nomascus_leucogenys
ENSPNAG00000020260	si:ch73-63e15.2	68	66.242	ENSMEUG00000013511	-	77	65.532	Notamacropus_eugenii
ENSPNAG00000020260	si:ch73-63e15.2	80	69.522	ENSOPRG00000017238	SBNO2	94	68.794	Ochotona_princeps
ENSPNAG00000020260	si:ch73-63e15.2	82	67.795	ENSODEG00000011822	SBNO2	90	65.404	Octodon_degus
ENSPNAG00000020260	si:ch73-63e15.2	89	78.100	ENSONIG00000002490	si:ch73-63e15.2	98	77.893	Oreochromis_niloticus
ENSPNAG00000020260	si:ch73-63e15.2	83	81.787	ENSORLG00000000913	si:ch73-63e15.2	78	82.282	Oryzias_latipes
ENSPNAG00000020260	si:ch73-63e15.2	83	81.700	ENSORLG00020010978	si:ch73-63e15.2	78	82.195	Oryzias_latipes_hni
ENSPNAG00000020260	si:ch73-63e15.2	83	82.134	ENSORLG00015000202	si:ch73-63e15.2	78	82.627	Oryzias_latipes_hsok
ENSPNAG00000020260	si:ch73-63e15.2	86	79.553	ENSOMEG00000000359	si:ch73-63e15.2	80	78.776	Oryzias_melastigma
ENSPNAG00000020260	si:ch73-63e15.2	82	67.072	ENSOARG00000011130	SBNO2	93	63.869	Ovis_aries
ENSPNAG00000020260	si:ch73-63e15.2	83	68.051	ENSPPAG00000032482	SBNO2	91	68.020	Pan_paniscus
ENSPNAG00000020260	si:ch73-63e15.2	83	68.974	ENSPTRG00000010185	SBNO2	89	68.942	Pan_troglodytes
ENSPNAG00000020260	si:ch73-63e15.2	83	65.444	ENSPANG00000009658	SBNO2	88	65.444	Papio_anubis
ENSPNAG00000020260	si:ch73-63e15.2	73	79.382	ENSPKIG00000009707	-	85	79.272	Paramormyrops_kingsleyae
ENSPNAG00000020260	si:ch73-63e15.2	99	71.520	ENSPKIG00000024201	si:ch73-63e15.2	86	80.884	Paramormyrops_kingsleyae
ENSPNAG00000020260	si:ch73-63e15.2	69	74.542	ENSPSIG00000002852	SBNO2	99	73.802	Pelodiscus_sinensis
ENSPNAG00000020260	si:ch73-63e15.2	87	76.910	ENSPMGG00000014375	si:ch73-63e15.2	93	75.810	Periophthalmus_magnuspinnatus
ENSPNAG00000020260	si:ch73-63e15.2	82	67.456	ENSPEMG00000024122	Sbno2	90	64.605	Peromyscus_maniculatus_bairdii
ENSPNAG00000020260	si:ch73-63e15.2	82	70.614	ENSPCIG00000011264	SBNO2	89	66.560	Phascolarctos_cinereus
ENSPNAG00000020260	si:ch73-63e15.2	85	80.900	ENSPFOG00000004096	si:ch73-63e15.2	99	79.688	Poecilia_formosa
ENSPNAG00000020260	si:ch73-63e15.2	85	81.810	ENSPLAG00000014653	si:ch73-63e15.2	78	82.152	Poecilia_latipinna
ENSPNAG00000020260	si:ch73-63e15.2	85	81.810	ENSPMEG00000002129	si:ch73-63e15.2	91	83.475	Poecilia_mexicana
ENSPNAG00000020260	si:ch73-63e15.2	85	80.714	ENSPREG00000006755	si:ch73-63e15.2	79	78.822	Poecilia_reticulata
ENSPNAG00000020260	si:ch73-63e15.2	88	62.756	ENSPCAG00000012256	SBNO2	87	63.356	Procavia_capensis
ENSPNAG00000020260	si:ch73-63e15.2	83	62.823	ENSPCOG00000015216	SBNO2	93	59.871	Propithecus_coquereli
ENSPNAG00000020260	si:ch73-63e15.2	89	79.028	ENSPNYG00000019926	si:ch73-63e15.2	81	79.352	Pundamilia_nyererei
ENSPNAG00000020260	si:ch73-63e15.2	83	68.448	ENSRNOG00000013987	Sbno2	90	68.268	Rattus_norvegicus
ENSPNAG00000020260	si:ch73-63e15.2	81	65.035	ENSRBIG00000009740	SBNO2	92	65.096	Rhinopithecus_bieti
ENSPNAG00000020260	si:ch73-63e15.2	73	73.054	ENSRROG00000044671	SBNO2	87	72.542	Rhinopithecus_roxellana
ENSPNAG00000020260	si:ch73-63e15.2	84	68.259	ENSSBOG00000023562	SBNO2	92	66.722	Saimiri_boliviensis_boliviensis
ENSPNAG00000020260	si:ch73-63e15.2	81	70.149	ENSSHAG00000010241	SBNO2	98	69.904	Sarcophilus_harrisii
ENSPNAG00000020260	si:ch73-63e15.2	98	68.701	ENSSFOG00015005861	si:ch73-63e15.2	99	78.454	Scleropages_formosus
ENSPNAG00000020260	si:ch73-63e15.2	86	81.803	ENSSMAG00000012489	si:ch73-63e15.2	77	81.803	Scophthalmus_maximus
ENSPNAG00000020260	si:ch73-63e15.2	86	82.378	ENSSDUG00000003527	si:ch73-63e15.2	77	82.378	Seriola_dumerili
ENSPNAG00000020260	si:ch73-63e15.2	86	81.956	ENSSLDG00000004623	si:ch73-63e15.2	77	81.956	Seriola_lalandi_dorsalis
ENSPNAG00000020260	si:ch73-63e15.2	87	82.348	ENSSPAG00000017717	si:ch73-63e15.2	79	82.348	Stegastes_partitus
ENSPNAG00000020260	si:ch73-63e15.2	83	69.502	ENSSSCG00000030042	SBNO2	90	69.502	Sus_scrofa
ENSPNAG00000020260	si:ch73-63e15.2	80	81.851	ENSTRUG00000018193	si:ch73-63e15.2	86	81.851	Takifugu_rubripes
ENSPNAG00000020260	si:ch73-63e15.2	75	70.190	ENSUAMG00000006568	SBNO2	91	74.838	Ursus_americanus
ENSPNAG00000020260	si:ch73-63e15.2	82	69.573	ENSVVUG00000022823	SBNO2	89	66.347	Vulpes_vulpes
ENSPNAG00000020260	si:ch73-63e15.2	75	75.758	ENSXETG00000021579	sbno2	90	76.162	Xenopus_tropicalis
ENSPNAG00000020260	si:ch73-63e15.2	72	81.780	ENSXCOG00000009209	si:ch73-63e15.2	94	81.867	Xiphophorus_couchianus
ENSPNAG00000020260	si:ch73-63e15.2	85	81.640	ENSXMAG00000012091	si:ch73-63e15.2	83	83.065	Xiphophorus_maculatus