EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000020475 (Gene tree)
Gene ID: 108429533
Gene Symbol: rab11ba
Alias: rab11b|wu:fb07g11|zgc:55760
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 6294 bases
Position: chrKV575360.1:1705558-1711851
Accession: 108429533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000032483	MMR_HSR1	PF01926.23	3.6e-07	1	1
ENSPNAP00000032490	MMR_HSR1	PF01926.23	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000022462	-	802	XM_017701341	ENSPNAP00000032483	218 (aa)	XP_017556830	UPI000814A6EC
ENSPNAT00000022458	-	768	-	ENSPNAP00000032490	255 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000020475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000020475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000020475	rab11ba	89	38.071	ENSPNAG00000017856	zgc:101559	82	38.071
ENSPNAG00000020475	rab11ba	88	34.715	ENSPNAG00000005519	-	88	34.715
ENSPNAG00000020475	rab11ba	72	35.849	ENSPNAG00000024254	rabl2	70	36.025
ENSPNAG00000020475	rab11ba	81	46.591	ENSPNAG00000014046	-	91	45.109
ENSPNAG00000020475	rab11ba	83	34.872	ENSPNAG00000021994	rab36	75	34.518
ENSPNAG00000020475	rab11ba	89	32.500	ENSPNAG00000028379	rab6ba	92	32.500
ENSPNAG00000020475	rab11ba	100	97.706	ENSPNAG00000006431	-	100	97.706
ENSPNAG00000020475	rab11ba	74	32.353	ENSPNAG00000028497	si:cabz01085950.1	82	32.353
ENSPNAG00000020475	rab11ba	79	46.552	ENSPNAG00000013897	rab39ba	82	46.552
ENSPNAG00000020475	rab11ba	87	42.932	ENSPNAG00000010760	rab30	95	42.932
ENSPNAG00000020475	rab11ba	74	38.922	ENSPNAG00000017938	RAB9A	76	38.922
ENSPNAG00000020475	rab11ba	99	82.028	ENSPNAG00000029085	rab11al	99	82.028
ENSPNAG00000020475	rab11ba	63	30.070	ENSPNAG00000009887	arl4ab	72	30.070
ENSPNAG00000020475	rab11ba	94	30.986	ENSPNAG00000003179	rab34a	80	30.986
ENSPNAG00000020475	rab11ba	74	36.310	ENSPNAG00000014146	-	79	36.310
ENSPNAG00000020475	rab11ba	75	43.636	ENSPNAG00000015031	rab12	83	37.963
ENSPNAG00000020475	rab11ba	74	32.317	ENSPNAG00000013747	mras	82	34.091
ENSPNAG00000020475	rab11ba	74	44.444	ENSPNAG00000011215	rab15	76	44.444
ENSPNAG00000020475	rab11ba	100	64.384	ENSPNAG00000006569	rab25b	100	64.384
ENSPNAG00000020475	rab11ba	76	46.988	ENSPNAG00000015810	RAB15	80	46.988
ENSPNAG00000020475	rab11ba	79	39.326	ENSPNAG00000007277	RAB9A	82	39.326
ENSPNAG00000020475	rab11ba	80	45.763	ENSPNAG00000013589	rab39bb	83	45.763
ENSPNAG00000020475	rab11ba	78	46.199	ENSPNAG00000002404	rab18b	83	46.199
ENSPNAG00000020475	rab11ba	85	37.186	ENSPNAG00000020583	zgc:100918	97	37.186
ENSPNAG00000020475	rab11ba	68	35.333	ENSPNAG00000014085	hrasa	85	36.420
ENSPNAG00000020475	rab11ba	100	87.615	ENSPNAG00000014863	rab11a	100	87.615
ENSPNAG00000020475	rab11ba	89	32.161	ENSPNAG00000010157	rab6bb	91	32.663
ENSPNAG00000020475	rab11ba	74	33.136	ENSPNAG00000017466	rab38b	80	33.136
ENSPNAG00000020475	rab11ba	72	30.000	ENSPNAG00000025213	arl11	89	30.000
ENSPNAG00000020475	rab11ba	95	38.278	ENSPNAG00000016567	rab42a	98	38.278
ENSPNAG00000020475	rab11ba	74	34.146	ENSPNAG00000026295	si:ch73-116o1.2	82	35.795
ENSPNAG00000020475	rab11ba	70	34.839	ENSPNAG00000028629	kras	87	35.928
ENSPNAG00000020475	rab11ba	80	52.299	ENSPNAG00000014363	-	81	52.299
ENSPNAG00000020475	rab11ba	75	47.239	ENSPNAG00000002218	-	92	41.748
ENSPNAG00000020475	rab11ba	76	54.217	ENSPNAG00000013004	rab1ba	84	53.571
ENSPNAG00000020475	rab11ba	72	40.491	ENSPNAG00000016600	-	78	40.491
ENSPNAG00000020475	rab11ba	91	38.889	ENSPNAG00000003227	rab3c	91	38.889
ENSPNAG00000020475	rab11ba	75	41.818	ENSPNAG00000021675	-	77	41.818
ENSPNAG00000020475	rab11ba	57	36.000	ENSPNAG00000008867	rab20	50	36.000
ENSPNAG00000020475	rab11ba	74	31.792	ENSPNAG00000007710	rasl11a	68	31.792
ENSPNAG00000020475	rab11ba	72	38.217	ENSPNAG00000021737	rab41	74	38.217
ENSPNAG00000020475	rab11ba	74	43.478	ENSPNAG00000015161	rab22a	82	43.478
ENSPNAG00000020475	rab11ba	72	40.491	ENSPNAG00000015164	-	78	40.491
ENSPNAG00000020475	rab11ba	82	38.587	ENSPNAG00000022929	rab33a	59	38.587
ENSPNAG00000020475	rab11ba	94	41.748	ENSPNAG00000023223	rab5aa	90	41.748
ENSPNAG00000020475	rab11ba	81	46.023	ENSPNAG00000004189	rab13	93	46.023
ENSPNAG00000020475	rab11ba	65	35.172	ENSPNAG00000015040	rab34b	66	37.179
ENSPNAG00000020475	rab11ba	95	45.933	ENSPNAG00000013863	rab1ab	88	47.000
ENSPNAG00000020475	rab11ba	68	36.184	ENSPNAG00000018361	rras	85	37.195
ENSPNAG00000020475	rab11ba	84	50.000	ENSPNAG00000029574	zgc:171927	85	50.000
ENSPNAG00000020475	rab11ba	78	54.971	ENSPNAG00000011193	rab2a	81	54.971
ENSPNAG00000020475	rab11ba	78	38.674	ENSPNAG00000029115	rab33ba	81	38.674
ENSPNAG00000020475	rab11ba	68	35.333	ENSPNAG00000000584	hrasb	85	36.420
ENSPNAG00000020475	rab11ba	96	46.411	ENSPNAG00000012540	-	99	46.411
ENSPNAG00000020475	rab11ba	78	45.614	ENSPNAG00000011548	rab18a	85	45.614
ENSPNAG00000020475	rab11ba	73	36.250	ENSPNAG00000024728	rab23	79	35.583
ENSPNAG00000020475	rab11ba	99	64.055	ENSPNAG00000000694	rab25a	100	64.055
ENSPNAG00000020475	rab11ba	80	45.402	ENSPNAG00000018986	si:dkey-16l2.16	98	41.627
ENSPNAG00000020475	rab11ba	94	41.627	ENSPNAG00000028138	rab5c	88	41.627
ENSPNAG00000020475	rab11ba	73	35.000	ENSPNAG00000004728	rheb	89	34.146
ENSPNAG00000020475	rab11ba	94	42.233	ENSPNAG00000009496	rab5ab	90	41.262
ENSPNAG00000020475	rab11ba	78	41.477	ENSPNAG00000018132	rab9b	77	41.477

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000020475	rab11ba	100	97.248	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
ENSPNAG00000020475	rab11ba	99	95.890	ENSAMEG00000004955	RAB11B	99	95.890	Ailuropoda_melanoleuca
ENSPNAG00000020475	rab11ba	86	90.374	ENSACIG00000024374	rab11ba	77	90.374	Amphilophus_citrinellus
ENSPNAG00000020475	rab11ba	100	94.495	ENSAOCG00000018050	rab11ba	100	94.495	Amphiprion_ocellaris
ENSPNAG00000020475	rab11ba	100	94.037	ENSAPEG00000009177	rab11ba	100	94.037	Amphiprion_percula
ENSPNAG00000020475	rab11ba	100	95.413	ENSATEG00000023730	rab11ba	100	95.413	Anabas_testudineus
ENSPNAG00000020475	rab11ba	100	97.248	ENSANAG00000037616	RAB11B	100	97.248	Aotus_nancymaae
ENSPNAG00000020475	rab11ba	99	85.253	ENSACLG00000018852	-	99	83.857	Astatotilapia_calliptera
ENSPNAG00000020475	rab11ba	100	93.119	ENSACLG00000005420	rab11ba	100	93.119	Astatotilapia_calliptera
ENSPNAG00000020475	rab11ba	99	80.093	WBGene00004274	rab-11.1	99	80.093	Caenorhabditis_elegans
ENSPNAG00000020475	rab11ba	100	97.248	ENSCJAG00000010778	RAB11B	100	97.248	Callithrix_jacchus
ENSPNAG00000020475	rab11ba	100	97.248	ENSCAFG00000032060	RAB11B	100	97.248	Canis_familiaris
ENSPNAG00000020475	rab11ba	100	97.248	ENSCAFG00020022184	RAB11B	100	97.248	Canis_lupus_dingo
ENSPNAG00000020475	rab11ba	100	97.248	ENSTSYG00000014758	RAB11B	100	97.248	Carlito_syrichta
ENSPNAG00000020475	rab11ba	100	97.248	ENSCPOG00000030154	RAB11B	100	97.248	Cavia_porcellus
ENSPNAG00000020475	rab11ba	100	97.248	ENSCCAG00000031042	RAB11B	100	97.248	Cebus_capucinus
ENSPNAG00000020475	rab11ba	100	97.248	ENSCLAG00000003207	RAB11B	100	97.248	Chinchilla_lanigera
ENSPNAG00000020475	rab11ba	100	97.248	ENSCSAG00000008024	RAB11B	100	97.248	Chlorocebus_sabaeus
ENSPNAG00000020475	rab11ba	100	83.028	ENSCHOG00000013525	RAB11B	100	83.028	Choloepus_hoffmanni
ENSPNAG00000020475	rab11ba	100	84.404	ENSCING00000009526	-	100	84.404	Ciona_intestinalis
ENSPNAG00000020475	rab11ba	100	97.248	ENSCANG00000040517	RAB11B	100	97.248	Colobus_angolensis_palliatus
ENSPNAG00000020475	rab11ba	100	97.248	ENSCGRG00001013827	Rab11b	100	97.248	Cricetulus_griseus_chok1gshd
ENSPNAG00000020475	rab11ba	100	97.248	ENSCGRG00000010967	Rab11b	100	97.248	Cricetulus_griseus_crigri
ENSPNAG00000020475	rab11ba	100	94.495	ENSCSEG00000007121	rab11ba	84	94.495	Cynoglossus_semilaevis
ENSPNAG00000020475	rab11ba	100	97.706	ENSDARG00000041878	rab11ba	100	97.706	Danio_rerio
ENSPNAG00000020475	rab11ba	100	97.248	ENSDNOG00000014618	RAB11B	97	97.248	Dasypus_novemcinctus
ENSPNAG00000020475	rab11ba	100	95.413	ENSDNOG00000004134	-	100	95.413	Dasypus_novemcinctus
ENSPNAG00000020475	rab11ba	100	96.330	ENSDORG00000006304	Rab11b	100	96.330	Dipodomys_ordii
ENSPNAG00000020475	rab11ba	100	92.202	ENSEBUG00000011775	rab11ba	99	92.195	Eptatretus_burgeri
ENSPNAG00000020475	rab11ba	100	80.734	ENSEBUG00000015447	-	100	80.734	Eptatretus_burgeri
ENSPNAG00000020475	rab11ba	66	99.301	ENSEEUG00000009165	-	100	99.301	Erinaceus_europaeus
ENSPNAG00000020475	rab11ba	89	92.268	ENSELUG00000019240	-	99	92.268	Esox_lucius
ENSPNAG00000020475	rab11ba	100	97.706	ENSFCAG00000015216	RAB11B	100	97.706	Felis_catus
ENSPNAG00000020475	rab11ba	100	97.248	ENSFDAG00000019872	RAB11B	100	97.248	Fukomys_damarensis
ENSPNAG00000020475	rab11ba	100	94.037	ENSFHEG00000022642	rab11ba	100	94.037	Fundulus_heteroclitus
ENSPNAG00000020475	rab11ba	100	93.578	ENSGMOG00000007390	rab11ba	99	93.578	Gadus_morhua
ENSPNAG00000020475	rab11ba	100	94.495	ENSGAFG00000005679	rab11ba	100	94.495	Gambusia_affinis
ENSPNAG00000020475	rab11ba	100	98.165	ENSGAGG00000012557	-	100	98.165	Gopherus_agassizii
ENSPNAG00000020475	rab11ba	100	97.248	ENSHGLG00000014984	RAB11B	100	97.248	Heterocephalus_glaber_female
ENSPNAG00000020475	rab11ba	100	96.789	ENSHGLG00100003638	RAB11B	100	96.789	Heterocephalus_glaber_male
ENSPNAG00000020475	rab11ba	100	97.248	ENSSTOG00000031571	RAB11B	100	97.248	Ictidomys_tridecemlineatus
ENSPNAG00000020475	rab11ba	100	97.248	ENSJJAG00000018891	Rab11b	100	97.248	Jaculus_jaculus
ENSPNAG00000020475	rab11ba	100	94.954	ENSKMAG00000006082	-	100	94.954	Kryptolebias_marmoratus
ENSPNAG00000020475	rab11ba	100	95.413	ENSLBEG00000006087	rab11ba	100	95.413	Labrus_bergylta
ENSPNAG00000020475	rab11ba	78	100.000	ENSLACG00000016974	RAB11B	99	100.000	Latimeria_chalumnae
ENSPNAG00000020475	rab11ba	100	97.248	ENSLAFG00000013598	RAB11B	100	97.248	Loxodonta_africana
ENSPNAG00000020475	rab11ba	100	97.248	ENSMNEG00000039759	-	100	97.248	Macaca_nemestrina
ENSPNAG00000020475	rab11ba	100	94.495	ENSMAMG00000018556	rab11ba	100	94.495	Mastacembelus_armatus
ENSPNAG00000020475	rab11ba	100	93.119	ENSMZEG00005010947	rab11ba	100	93.119	Maylandia_zebra
ENSPNAG00000020475	rab11ba	99	85.253	ENSMZEG00005019251	-	99	83.857	Maylandia_zebra
ENSPNAG00000020475	rab11ba	100	96.789	ENSMAUG00000021579	Rab11b	100	96.789	Mesocricetus_auratus
ENSPNAG00000020475	rab11ba	100	97.248	ENSMOCG00000012667	Rab11b	100	97.248	Microtus_ochrogaster
ENSPNAG00000020475	rab11ba	100	92.202	ENSMALG00000021949	rab11ba	100	92.202	Monopterus_albus
ENSPNAG00000020475	rab11ba	100	97.248	MGP_CAROLIEiJ_G0021415	Rab11b	100	97.248	Mus_caroli
ENSPNAG00000020475	rab11ba	100	96.330	ENSMUSG00000077450	Rab11b	100	96.330	Mus_musculus
ENSPNAG00000020475	rab11ba	100	97.248	MGP_PahariEiJ_G0020420	Rab11b	100	97.248	Mus_pahari
ENSPNAG00000020475	rab11ba	100	97.248	MGP_SPRETEiJ_G0022327	Rab11b	100	97.248	Mus_spretus
ENSPNAG00000020475	rab11ba	100	97.248	ENSMPUG00000007263	RAB11B	100	97.248	Mustela_putorius_furo
ENSPNAG00000020475	rab11ba	100	92.760	ENSMLUG00000002308	-	100	92.760	Myotis_lucifugus
ENSPNAG00000020475	rab11ba	100	97.248	ENSNGAG00000015757	Rab11b	100	97.248	Nannospalax_galili
ENSPNAG00000020475	rab11ba	100	93.578	ENSNBRG00000023898	rab11ba	84	93.578	Neolamprologus_brichardi
ENSPNAG00000020475	rab11ba	100	97.248	ENSNLEG00000001733	RAB11B	100	97.248	Nomascus_leucogenys
ENSPNAG00000020475	rab11ba	100	97.248	ENSODEG00000011371	RAB11B	100	97.248	Octodon_degus
ENSPNAG00000020475	rab11ba	100	94.037	ENSONIG00000002535	rab11ba	100	94.037	Oreochromis_niloticus
ENSPNAG00000020475	rab11ba	74	97.516	ENSOCUG00000028208	RAB11B	64	97.516	Oryctolagus_cuniculus
ENSPNAG00000020475	rab11ba	99	94.931	ENSORLG00000015307	rab11ba	99	94.931	Oryzias_latipes
ENSPNAG00000020475	rab11ba	99	94.931	ENSORLG00020020816	rab11ba	99	94.931	Oryzias_latipes_hni
ENSPNAG00000020475	rab11ba	99	95.370	ENSORLG00015016946	rab11ba	89	88.655	Oryzias_latipes_hsok
ENSPNAG00000020475	rab11ba	99	94.931	ENSOMEG00000002581	rab11ba	99	94.931	Oryzias_melastigma
ENSPNAG00000020475	rab11ba	100	97.248	ENSOGAG00000003227	RAB11B	99	97.248	Otolemur_garnettii
ENSPNAG00000020475	rab11ba	100	97.248	ENSOARG00000003801	RAB11B	97	97.248	Ovis_aries
ENSPNAG00000020475	rab11ba	83	95.000	ENSPPRG00000010160	RAB11B	88	95.000	Panthera_pardus
ENSPNAG00000020475	rab11ba	100	97.248	ENSPEMG00000014536	Rab11b	100	97.248	Peromyscus_maniculatus_bairdii
ENSPNAG00000020475	rab11ba	94	80.000	ENSPMAG00000009335	-	100	80.000	Petromyzon_marinus
ENSPNAG00000020475	rab11ba	100	94.954	ENSPFOG00000006159	rab11ba	100	94.954	Poecilia_formosa
ENSPNAG00000020475	rab11ba	100	94.954	ENSPLAG00000014243	rab11ba	100	94.954	Poecilia_latipinna
ENSPNAG00000020475	rab11ba	100	94.954	ENSPMEG00000007917	rab11ba	76	94.545	Poecilia_mexicana
ENSPNAG00000020475	rab11ba	100	94.954	ENSPREG00000006357	rab11ba	79	94.545	Poecilia_reticulata
ENSPNAG00000020475	rab11ba	100	97.248	ENSPPYG00000009504	RAB11B	100	97.248	Pongo_abelii
ENSPNAG00000020475	rab11ba	100	88.532	ENSPCAG00000016118	RAB11B	100	88.532	Procavia_capensis
ENSPNAG00000020475	rab11ba	67	97.260	ENSPCOG00000008655	-	100	97.260	Propithecus_coquereli
ENSPNAG00000020475	rab11ba	100	97.248	ENSPCOG00000028053	RAB11B	100	97.248	Propithecus_coquereli
ENSPNAG00000020475	rab11ba	100	97.248	ENSPVAG00000009645	RAB11B	100	97.248	Pteropus_vampyrus
ENSPNAG00000020475	rab11ba	100	93.119	ENSPNYG00000019644	rab11ba	100	93.119	Pundamilia_nyererei
ENSPNAG00000020475	rab11ba	93	79.512	ENSPNYG00000023810	-	90	79.512	Pundamilia_nyererei
ENSPNAG00000020475	rab11ba	100	97.248	ENSRNOG00000007648	Rab11b	100	97.248	Rattus_norvegicus
ENSPNAG00000020475	rab11ba	100	97.248	ENSSBOG00000035094	RAB11B	100	97.248	Saimiri_boliviensis_boliviensis
ENSPNAG00000020475	rab11ba	100	94.954	ENSSDUG00000002965	rab11ba	100	94.954	Seriola_dumerili
ENSPNAG00000020475	rab11ba	100	94.954	ENSSLDG00000005221	rab11ba	100	94.954	Seriola_lalandi_dorsalis
ENSPNAG00000020475	rab11ba	100	94.037	ENSSPAG00000017313	rab11ba	100	94.037	Stegastes_partitus
ENSPNAG00000020475	rab11ba	100	97.248	ENSSSCG00000013600	RAB11B	100	97.248	Sus_scrofa
ENSPNAG00000020475	rab11ba	59	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSPNAG00000020475	rab11ba	100	97.248	ENSTTRG00000009758	RAB11B	100	97.248	Tursiops_truncatus
ENSPNAG00000020475	rab11ba	88	83.770	ENSUMAG00000014594	RAB11B	91	81.443	Ursus_maritimus
ENSPNAG00000020475	rab11ba	100	97.248	ENSVVUG00000025210	RAB11B	100	97.248	Vulpes_vulpes
ENSPNAG00000020475	rab11ba	100	94.495	ENSXETG00000021890	rab11b.2	99	94.495	Xenopus_tropicalis
ENSPNAG00000020475	rab11ba	61	98.496	ENSXCOG00000009194	-	98	98.496	Xiphophorus_couchianus
ENSPNAG00000020475	rab11ba	100	94.495	ENSXMAG00000013416	rab11ba	100	94.495	Xiphophorus_maculatus