EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000020630 (Gene tree)
Gene ID: 108434587
Gene Symbol: ovol1a
Alias: ovol1|sb:cb956|zgc:171804
Full Name: putative transcription factor Ovo-like 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 7407 bases
Position: chrKV575448.1:141236-148642
Accession: 108434587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000014684	zf-C2H2	PF00096.26	1.3e-14	1	3
ENSPNAP00000014684	zf-C2H2	PF00096.26	1.3e-14	2	3
ENSPNAP00000014684	zf-C2H2	PF00096.26	1.3e-14	3	3
ENSPNAP00000014684	zf-met	PF12874.7	5.6e-05	1	2
ENSPNAP00000014684	zf-met	PF12874.7	5.6e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000022655	-	2453	XM_017709828	ENSPNAP00000014684	321 (aa)	XP_017565317	UPI00081446F4

Gene Model

Click here to download ENSPNAG00000020630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000020630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000020630	ovol1a	55	33.871	ENSPNAG00000026181	prdm5	52	36.471
ENSPNAG00000020630	ovol1a	65	37.607	ENSPNAG00000016025	-	85	37.607
ENSPNAG00000020630	ovol1a	82	35.088	ENSPNAG00000012206	-	92	35.088
ENSPNAG00000020630	ovol1a	53	34.483	ENSPNAG00000002287	-	83	36.752
ENSPNAG00000020630	ovol1a	71	38.235	ENSPNAG00000002209	-	91	38.235
ENSPNAG00000020630	ovol1a	71	39.831	ENSPNAG00000012154	-	90	39.831
ENSPNAG00000020630	ovol1a	61	40.351	ENSPNAG00000029386	-	76	40.351
ENSPNAG00000020630	ovol1a	61	31.395	ENSPNAG00000023191	-	53	35.294
ENSPNAG00000020630	ovol1a	66	38.462	ENSPNAG00000016045	-	70	38.462
ENSPNAG00000020630	ovol1a	63	33.043	ENSPNAG00000000066	-	77	33.043
ENSPNAG00000020630	ovol1a	80	35.802	ENSPNAG00000010317	-	80	35.802
ENSPNAG00000020630	ovol1a	70	34.188	ENSPNAG00000005829	-	79	36.752
ENSPNAG00000020630	ovol1a	89	47.059	ENSPNAG00000016198	ovol1b	96	47.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000020630	ovol1a	96	46.203	ENSAMXG00000041879	ovol1b	96	46.203	Astyanax_mexicanus
ENSPNAG00000020630	ovol1a	99	86.687	ENSAMXG00000011046	ovol1a	99	86.997	Astyanax_mexicanus
ENSPNAG00000020630	ovol1a	99	72.981	ENSDARG00000076472	ovol1a	100	72.981	Danio_rerio
ENSPNAG00000020630	ovol1a	96	51.792	ENSDARG00000078256	ovol1b	99	51.792	Danio_rerio
ENSPNAG00000020630	ovol1a	99	61.449	ENSELUG00000000343	ovol1a	99	61.739	Esox_lucius
ENSPNAG00000020630	ovol1a	100	57.465	ENSFHEG00000002773	-	100	59.889	Fundulus_heteroclitus
ENSPNAG00000020630	ovol1a	100	51.077	ENSGACG00000018794	ovol1a	100	52.615	Gasterosteus_aculeatus
ENSPNAG00000020630	ovol1a	100	58.960	ENSHCOG00000015860	ovol1a	100	58.960	Hippocampus_comes
ENSPNAG00000020630	ovol1a	100	56.571	ENSKMAG00000002605	-	100	58.000	Kryptolebias_marmoratus
ENSPNAG00000020630	ovol1a	100	55.153	ENSMAMG00000009768	ovol1a	100	57.182	Mastacembelus_armatus
ENSPNAG00000020630	ovol1a	100	58.640	ENSMALG00000008421	ovol1a	100	58.640	Monopterus_albus
ENSPNAG00000020630	ovol1a	100	61.162	ENSPKIG00000024718	ovol1a	100	61.162	Paramormyrops_kingsleyae
ENSPNAG00000020630	ovol1a	100	55.556	ENSPFOG00000008841	-	100	57.143	Poecilia_formosa
ENSPNAG00000020630	ovol1a	100	52.419	ENSSDUG00000009846	ovol1a	100	55.342	Seriola_dumerili
ENSPNAG00000020630	ovol1a	64	55.093	ENSXCOG00000006461	-	77	55.093	Xiphophorus_couchianus