EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000020795 (Gene tree)
Gene ID: 108434006
Gene Symbol: spen
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 38094 bases
Position: chrKV575291.1:5657230-5695323
Accession: 108434006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000032705	RRM_5	PF13893.6	1.1e-07	1	2
ENSPNAP00000032705	RRM_5	PF13893.6	1.1e-07	2	2
ENSPNAP00000032705	RRM_1	PF00076.22	3.2e-42	1	3
ENSPNAP00000032705	RRM_1	PF00076.22	3.2e-42	2	3
ENSPNAP00000032705	RRM_1	PF00076.22	3.2e-42	3	3
ENSPNAP00000032675	RRM_1	PF00076.22	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000037483	-	12813	XM_017708925	ENSPNAP00000032705	3499 (aa)	XP_017564414	UPI00081462E3
ENSPNAT00000022822	-	909	-	ENSPNAP00000032675	302 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000020795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000020795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000020795	spen	98	73.822	ENSPNAG00000011452	si:ch1073-335m2.2	99	78.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000020795	spen	89	82.967	ENSG00000065526	SPEN	96	84.181	Homo_sapiens
ENSPNAG00000020795	spen	87	82.061	ENSAPOG00000009853	-	86	87.006	Acanthochromis_polyacanthus
ENSPNAG00000020795	spen	97	81.657	ENSAPOG00000011411	si:ch1073-335m2.2	99	81.657	Acanthochromis_polyacanthus
ENSPNAG00000020795	spen	86	77.444	ENSAMEG00000011817	SPEN	96	83.051	Ailuropoda_melanoleuca
ENSPNAG00000020795	spen	85	74.436	ENSAOCG00000008077	si:ch1073-335m2.2	99	74.436	Amphiprion_ocellaris
ENSPNAG00000020795	spen	87	70.607	ENSAOCG00000014505	-	100	57.384	Amphiprion_ocellaris
ENSPNAG00000020795	spen	97	81.657	ENSAPEG00000013515	si:ch1073-335m2.2	99	81.657	Amphiprion_percula
ENSPNAG00000020795	spen	87	70.607	ENSAPEG00000010288	-	100	57.313	Amphiprion_percula
ENSPNAG00000020795	spen	97	80.588	ENSATEG00000007674	si:ch1073-335m2.2	99	80.588	Anabas_testudineus
ENSPNAG00000020795	spen	100	57.052	ENSATEG00000005627	-	100	56.949	Anabas_testudineus
ENSPNAG00000020795	spen	77	75.314	ENSAPLG00000012618	SPEN	99	81.333	Anas_platyrhynchos
ENSPNAG00000020795	spen	77	70.866	ENSACAG00000013761	SPEN	95	47.824	Anolis_carolinensis
ENSPNAG00000020795	spen	78	75.934	ENSANAG00000034428	SPEN	96	74.854	Aotus_nancymaae
ENSPNAG00000020795	spen	88	67.547	ENSACLG00000021433	si:ch1073-335m2.2	99	81.065	Astatotilapia_calliptera
ENSPNAG00000020795	spen	87	70.927	ENSACLG00000016922	-	100	56.906	Astatotilapia_calliptera
ENSPNAG00000020795	spen	100	83.399	ENSAMXG00000012485	spen	100	83.399	Astyanax_mexicanus
ENSPNAG00000020795	spen	86	77.444	ENSBTAG00000018729	SPEN	97	83.051	Bos_taurus
ENSPNAG00000020795	spen	89	82.967	ENSCJAG00000008527	SPEN	96	84.181	Callithrix_jacchus
ENSPNAG00000020795	spen	86	78.195	ENSCAFG00000016132	-	91	84.181	Canis_familiaris
ENSPNAG00000020795	spen	86	78.195	ENSCHIG00000025070	SPEN	97	84.181	Capra_hircus
ENSPNAG00000020795	spen	80	49.976	ENSTSYG00000036016	SPEN	96	46.744	Carlito_syrichta
ENSPNAG00000020795	spen	86	78.571	ENSCCAG00000020258	SPEN	86	84.181	Cebus_capucinus
ENSPNAG00000020795	spen	84	88.148	ENSCATG00000015079	SPEN	96	84.181	Cercocebus_atys
ENSPNAG00000020795	spen	89	82.967	ENSCSAG00000000841	SPEN	96	84.181	Chlorocebus_sabaeus
ENSPNAG00000020795	spen	86	77.820	ENSCPBG00000010477	SPEN	99	84.181	Chrysemys_picta_bellii
ENSPNAG00000020795	spen	88	73.864	ENSCANG00000034547	SPEN	96	74.854	Colobus_angolensis_palliatus
ENSPNAG00000020795	spen	86	78.195	ENSCGRG00001007725	Spen	97	84.181	Cricetulus_griseus_chok1gshd
ENSPNAG00000020795	spen	68	73.934	ENSCGRG00000010581	Spen	94	81.208	Cricetulus_griseus_crigri
ENSPNAG00000020795	spen	87	70.701	ENSCSEG00000003915	-	100	60.000	Cynoglossus_semilaevis
ENSPNAG00000020795	spen	95	72.864	ENSCVAG00000009075	si:ch1073-335m2.2	99	76.879	Cyprinodon_variegatus
ENSPNAG00000020795	spen	87	68.051	ENSCVAG00000016346	-	100	54.882	Cyprinodon_variegatus
ENSPNAG00000020795	spen	100	64.090	ENSDARG00000074245	spen	100	95.556	Danio_rerio
ENSPNAG00000020795	spen	98	76.882	ENSDARG00000074332	si:ch1073-335m2.2	99	76.882	Danio_rerio
ENSPNAG00000020795	spen	98	82.418	ENSDNOG00000041948	SPEN	96	83.616	Dasypus_novemcinctus
ENSPNAG00000020795	spen	78	75.104	ENSDORG00000023909	Spen	99	80.556	Dipodomys_ordii
ENSPNAG00000020795	spen	77	76.891	ENSETEG00000016692	-	57	81.208	Echinops_telfairi
ENSPNAG00000020795	spen	67	57.919	ENSEBUG00000005464	-	64	64.249	Eptatretus_burgeri
ENSPNAG00000020795	spen	94	88.148	ENSEASG00005015911	SPEN	96	84.181	Equus_asinus_asinus
ENSPNAG00000020795	spen	94	88.148	ENSECAG00000008833	SPEN	96	84.181	Equus_caballus
ENSPNAG00000020795	spen	86	77.068	ENSEEUG00000010255	SPEN	63	86.047	Erinaceus_europaeus
ENSPNAG00000020795	spen	54	50.025	ENSFALG00000003551	SPEN	100	47.669	Ficedula_albicollis
ENSPNAG00000020795	spen	75	74.786	ENSFDAG00000010212	SPEN	91	80.556	Fukomys_damarensis
ENSPNAG00000020795	spen	95	73.367	ENSFHEG00000004544	si:ch1073-335m2.2	99	77.457	Fundulus_heteroclitus
ENSPNAG00000020795	spen	87	79.389	ENSFHEG00000013136	-	87	85.876	Fundulus_heteroclitus
ENSPNAG00000020795	spen	99	66.228	ENSGMOG00000008156	si:ch1073-335m2.2	99	76.879	Gadus_morhua
ENSPNAG00000020795	spen	97	83.696	ENSGMOG00000008397	-	96	85.876	Gadus_morhua
ENSPNAG00000020795	spen	86	77.820	ENSGALG00000036932	SPEN	99	84.181	Gallus_gallus
ENSPNAG00000020795	spen	92	72.222	ENSGAFG00000021570	si:ch1073-335m2.2	99	78.035	Gambusia_affinis
ENSPNAG00000020795	spen	87	79.771	ENSGAFG00000015819	-	87	85.876	Gambusia_affinis
ENSPNAG00000020795	spen	88	67.925	ENSGACG00000001176	si:ch1073-335m2.2	99	78.613	Gasterosteus_aculeatus
ENSPNAG00000020795	spen	87	81.955	ENSGACG00000005341	-	99	86.441	Gasterosteus_aculeatus
ENSPNAG00000020795	spen	99	73.759	ENSGAGG00000020785	SPEN	99	84.181	Gopherus_agassizii
ENSPNAG00000020795	spen	86	78.195	ENSGGOG00000012041	SPEN	96	84.181	Gorilla_gorilla
ENSPNAG00000020795	spen	90	81.065	ENSHBUG00000023253	si:ch1073-335m2.2	99	81.065	Haplochromis_burtoni
ENSPNAG00000020795	spen	87	70.607	ENSHBUG00000020626	-	100	56.922	Haplochromis_burtoni
ENSPNAG00000020795	spen	86	77.903	ENSHGLG00000019259	SPEN	76	84.181	Heterocephalus_glaber_female
ENSPNAG00000020795	spen	75	73.932	ENSHGLG00100019294	SPEN	80	80.556	Heterocephalus_glaber_male
ENSPNAG00000020795	spen	93	77.778	ENSHCOG00000006004	si:ch1073-335m2.2	99	77.778	Hippocampus_comes
ENSPNAG00000020795	spen	87	71.756	ENSHCOG00000002791	-	83	78.947	Hippocampus_comes
ENSPNAG00000020795	spen	94	71.809	ENSIPUG00000018212	si:ch1073-335m2.2	97	71.809	Ictalurus_punctatus
ENSPNAG00000020795	spen	100	73.299	ENSIPUG00000021668	spen	100	73.384	Ictalurus_punctatus
ENSPNAG00000020795	spen	75	75.107	ENSSTOG00000021428	SPEN	96	76.147	Ictidomys_tridecemlineatus
ENSPNAG00000020795	spen	86	77.444	ENSJJAG00000010882	Spen	98	83.051	Jaculus_jaculus
ENSPNAG00000020795	spen	98	71.859	ENSKMAG00000021725	si:ch1073-335m2.2	99	78.035	Kryptolebias_marmoratus
ENSPNAG00000020795	spen	87	69.329	ENSKMAG00000003882	-	100	55.054	Kryptolebias_marmoratus
ENSPNAG00000020795	spen	97	79.882	ENSLBEG00000020855	si:ch1073-335m2.2	99	81.325	Labrus_bergylta
ENSPNAG00000020795	spen	86	76.245	ENSLBEG00000019151	-	89	76.245	Labrus_bergylta
ENSPNAG00000020795	spen	84	50.831	ENSLBEG00000019129	-	100	50.701	Labrus_bergylta
ENSPNAG00000020795	spen	98	81.868	ENSLACG00000003258	SPEN	99	83.051	Latimeria_chalumnae
ENSPNAG00000020795	spen	97	85.517	ENSLOCG00000007896	si:ch1073-335m2.2	97	85.517	Lepisosteus_oculatus
ENSPNAG00000020795	spen	86	71.212	ENSLAFG00000004524	SPEN	96	80.921	Loxodonta_africana
ENSPNAG00000020795	spen	89	82.967	ENSMFAG00000041974	SPEN	96	84.181	Macaca_fascicularis
ENSPNAG00000020795	spen	89	82.967	ENSMMUG00000008026	SPEN	96	84.181	Macaca_mulatta
ENSPNAG00000020795	spen	89	82.967	ENSMNEG00000042402	SPEN	96	84.181	Macaca_nemestrina
ENSPNAG00000020795	spen	89	71.978	ENSMLEG00000039293	SPEN	96	72.881	Mandrillus_leucophaeus
ENSPNAG00000020795	spen	87	83.270	ENSMAMG00000014536	-	86	87.571	Mastacembelus_armatus
ENSPNAG00000020795	spen	97	80.117	ENSMAMG00000023870	si:ch1073-335m2.2	52	80.117	Mastacembelus_armatus
ENSPNAG00000020795	spen	89	54.374	ENSMZEG00005021491	-	99	54.374	Maylandia_zebra
ENSPNAG00000020795	spen	88	67.547	ENSMZEG00005011762	si:ch1073-335m2.2	99	81.065	Maylandia_zebra
ENSPNAG00000020795	spen	86	77.820	ENSMGAG00000005180	-	98	84.181	Meleagris_gallopavo
ENSPNAG00000020795	spen	86	77.820	ENSMAUG00000008318	Spen	97	83.616	Mesocricetus_auratus
ENSPNAG00000020795	spen	86	77.820	ENSMICG00000030994	SPEN	96	83.616	Microcebus_murinus
ENSPNAG00000020795	spen	86	77.820	ENSMOCG00000016083	Spen	97	83.616	Microtus_ochrogaster
ENSPNAG00000020795	spen	86	83.142	ENSMMOG00000017059	-	87	88.136	Mola_mola
ENSPNAG00000020795	spen	93	75.676	ENSMMOG00000021742	si:ch1073-335m2.2	95	78.613	Mola_mola
ENSPNAG00000020795	spen	86	77.903	ENSMODG00000003411	SPEN	99	84.181	Monodelphis_domestica
ENSPNAG00000020795	spen	100	57.269	ENSMALG00000008625	-	100	57.344	Monopterus_albus
ENSPNAG00000020795	spen	86	77.444	MGP_CAROLIEiJ_G0026745	Spen	97	83.051	Mus_caroli
ENSPNAG00000020795	spen	86	77.820	ENSMUSG00000040761	Spen	97	83.616	Mus_musculus
ENSPNAG00000020795	spen	86	77.444	MGP_SPRETEiJ_G0027724	Spen	97	83.051	Mus_spretus
ENSPNAG00000020795	spen	96	74.561	ENSMPUG00000016317	SPEN	96	76.147	Mustela_putorius_furo
ENSPNAG00000020795	spen	93	86.022	ENSMLUG00000010144	SPEN	96	86.022	Myotis_lucifugus
ENSPNAG00000020795	spen	86	78.195	ENSNGAG00000000641	Spen	96	84.181	Nannospalax_galili
ENSPNAG00000020795	spen	95	81.065	ENSNBRG00000005733	si:ch1073-335m2.2	99	81.065	Neolamprologus_brichardi
ENSPNAG00000020795	spen	85	52.291	ENSNBRG00000022090	-	100	52.437	Neolamprologus_brichardi
ENSPNAG00000020795	spen	78	75.519	ENSNLEG00000007652	SPEN	96	80.921	Nomascus_leucogenys
ENSPNAG00000020795	spen	90	83.333	ENSMEUG00000002422	SPEN	90	83.333	Notamacropus_eugenii
ENSPNAG00000020795	spen	77	75.210	ENSOPRG00000015800	SPEN	83	80.537	Ochotona_princeps
ENSPNAG00000020795	spen	86	77.903	ENSODEG00000016644	SPEN	99	84.181	Octodon_degus
ENSPNAG00000020795	spen	87	83.588	ENSONIG00000006573	-	98	88.430	Oreochromis_niloticus
ENSPNAG00000020795	spen	77	75.314	ENSOANG00000004165	-	99	81.744	Ornithorhynchus_anatinus
ENSPNAG00000020795	spen	88	74.227	ENSORLG00000018414	si:ch1073-335m2.2	99	78.613	Oryzias_latipes
ENSPNAG00000020795	spen	87	48.492	ENSORLG00000028894	-	100	48.294	Oryzias_latipes
ENSPNAG00000020795	spen	97	74.227	ENSORLG00020009351	si:ch1073-335m2.2	99	78.613	Oryzias_latipes_hni
ENSPNAG00000020795	spen	87	48.605	ENSORLG00020007735	-	100	48.434	Oryzias_latipes_hni
ENSPNAG00000020795	spen	88	67.203	ENSORLG00015022085	-	100	52.220	Oryzias_latipes_hsok
ENSPNAG00000020795	spen	87	80.745	ENSORLG00015005537	si:ch1073-335m2.2	99	78.613	Oryzias_latipes_hsok
ENSPNAG00000020795	spen	86	68.078	ENSOMEG00000007639	-	100	51.672	Oryzias_melastigma
ENSPNAG00000020795	spen	97	73.711	ENSOMEG00000004509	si:ch1073-335m2.2	99	78.736	Oryzias_melastigma
ENSPNAG00000020795	spen	86	78.195	ENSOGAG00000025110	SPEN	96	84.181	Otolemur_garnettii
ENSPNAG00000020795	spen	84	72.587	ENSOARG00000008477	SPEN	96	75.882	Ovis_aries
ENSPNAG00000020795	spen	88	79.870	ENSPPAG00000035690	SPEN	96	81.208	Pan_paniscus
ENSPNAG00000020795	spen	86	78.195	ENSPTRG00000000210	SPEN	96	84.181	Pan_troglodytes
ENSPNAG00000020795	spen	89	82.967	ENSPANG00000006293	SPEN	96	84.181	Papio_anubis
ENSPNAG00000020795	spen	86	84.351	ENSPKIG00000002617	SPEN	89	88.827	Paramormyrops_kingsleyae
ENSPNAG00000020795	spen	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSPNAG00000020795	spen	77	75.314	ENSPSIG00000008026	SPEN	99	81.333	Pelodiscus_sinensis
ENSPNAG00000020795	spen	86	69.318	ENSPEMG00000022997	Spen	97	79.167	Peromyscus_maniculatus_bairdii
ENSPNAG00000020795	spen	87	80.916	ENSPFOG00000024806	-	98	87.535	Poecilia_formosa
ENSPNAG00000020795	spen	88	67.925	ENSPFOG00000017986	si:ch1073-335m2.2	99	78.035	Poecilia_formosa
ENSPNAG00000020795	spen	87	79.771	ENSPLAG00000001398	-	87	85.876	Poecilia_latipinna
ENSPNAG00000020795	spen	89	73.737	ENSPLAG00000016625	si:ch1073-335m2.2	99	78.035	Poecilia_latipinna
ENSPNAG00000020795	spen	87	79.389	ENSPMEG00000006764	-	87	85.311	Poecilia_mexicana
ENSPNAG00000020795	spen	88	67.925	ENSPMEG00000002674	si:ch1073-335m2.2	99	78.035	Poecilia_mexicana
ENSPNAG00000020795	spen	87	79.389	ENSPREG00000010399	-	87	85.311	Poecilia_reticulata
ENSPNAG00000020795	spen	92	73.737	ENSPREG00000005357	si:ch1073-335m2.2	99	78.035	Poecilia_reticulata
ENSPNAG00000020795	spen	86	78.195	ENSPPYG00000001834	SPEN	96	84.181	Pongo_abelii
ENSPNAG00000020795	spen	88	67.200	ENSPCAG00000009543	SPEN	86	75.000	Procavia_capensis
ENSPNAG00000020795	spen	86	77.444	ENSPCOG00000021735	SPEN	96	83.616	Propithecus_coquereli
ENSPNAG00000020795	spen	86	77.444	ENSPVAG00000013794	SPEN	70	83.051	Pteropus_vampyrus
ENSPNAG00000020795	spen	87	70.927	ENSPNYG00000012379	-	100	56.977	Pundamilia_nyererei
ENSPNAG00000020795	spen	92	81.065	ENSPNYG00000009042	si:ch1073-335m2.2	99	81.065	Pundamilia_nyererei
ENSPNAG00000020795	spen	77	75.314	ENSRNOG00000033556	Spen	97	80.667	Rattus_norvegicus
ENSPNAG00000020795	spen	88	79.870	ENSRBIG00000039654	SPEN	96	81.208	Rhinopithecus_bieti
ENSPNAG00000020795	spen	88	79.618	ENSRROG00000035686	SPEN	96	80.921	Rhinopithecus_roxellana
ENSPNAG00000020795	spen	88	79.618	ENSSBOG00000028770	SPEN	86	80.921	Saimiri_boliviensis_boliviensis
ENSPNAG00000020795	spen	79	73.984	ENSSHAG00000004960	SPEN	97	81.267	Sarcophilus_harrisii
ENSPNAG00000020795	spen	86	74.587	ENSSFOG00015010267	si:ch1073-335m2.2	94	57.792	Scleropages_formosus
ENSPNAG00000020795	spen	86	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	100	59.142	Scleropages_formosus
ENSPNAG00000020795	spen	100	56.540	ENSSMAG00000008996	-	100	56.252	Scophthalmus_maximus
ENSPNAG00000020795	spen	88	67.925	ENSSMAG00000000125	si:ch1073-335m2.2	51	81.065	Scophthalmus_maximus
ENSPNAG00000020795	spen	97	81.657	ENSSDUG00000008416	si:ch1073-335m2.2	99	81.657	Seriola_dumerili
ENSPNAG00000020795	spen	87	83.333	ENSSDUG00000003476	-	86	88.136	Seriola_dumerili
ENSPNAG00000020795	spen	87	83.333	ENSSLDG00000012950	-	86	88.136	Seriola_lalandi_dorsalis
ENSPNAG00000020795	spen	98	72.222	ENSSLDG00000023347	si:ch1073-335m2.2	99	78.035	Seriola_lalandi_dorsalis
ENSPNAG00000020795	spen	54	47.830	ENSSPUG00000001866	-	100	46.051	Sphenodon_punctatus
ENSPNAG00000020795	spen	97	82.249	ENSSPAG00000012454	si:ch1073-335m2.2	99	82.249	Stegastes_partitus
ENSPNAG00000020795	spen	87	83.206	ENSSPAG00000006014	-	87	87.571	Stegastes_partitus
ENSPNAG00000020795	spen	86	78.195	ENSSSCG00000034484	SPEN	95	84.181	Sus_scrofa
ENSPNAG00000020795	spen	87	71.154	ENSTRUG00000024350	-	100	55.236	Takifugu_rubripes
ENSPNAG00000020795	spen	86	62.917	ENSTRUG00000021008	si:ch1073-335m2.2	100	66.063	Takifugu_rubripes
ENSPNAG00000020795	spen	97	80.473	ENSTNIG00000014666	si:ch1073-335m2.2	98	80.473	Tetraodon_nigroviridis
ENSPNAG00000020795	spen	97	78.935	ENSTNIG00000010907	-	99	88.136	Tetraodon_nigroviridis
ENSPNAG00000020795	spen	68	89.349	ENSTBEG00000003628	SPEN	67	89.349	Tupaia_belangeri
ENSPNAG00000020795	spen	72	89.349	ENSTTRG00000015704	SPEN	68	89.349	Tursiops_truncatus
ENSPNAG00000020795	spen	86	78.195	ENSUAMG00000009600	SPEN	96	84.181	Ursus_americanus
ENSPNAG00000020795	spen	79	74.286	ENSUMAG00000021641	SPEN	96	78.846	Ursus_maritimus
ENSPNAG00000020795	spen	90	100.000	ENSVVUG00000028951	SPEN	95	100.000	Vulpes_vulpes
ENSPNAG00000020795	spen	86	75.188	ENSXETG00000023114	SPEN	99	80.226	Xenopus_tropicalis
ENSPNAG00000020795	spen	96	72.500	ENSXCOG00000004516	si:ch1073-335m2.2	99	72.500	Xiphophorus_couchianus
ENSPNAG00000020795	spen	87	78.626	ENSXMAG00000021384	-	87	85.876	Xiphophorus_maculatus
ENSPNAG00000020795	spen	92	72.727	ENSXMAG00000029887	si:ch1073-335m2.2	99	78.035	Xiphophorus_maculatus