EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000020897 (Gene tree)
Gene ID: 108442314
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12731 bases
Position: chrKV575751.1:104373-117103
Accession: 108442314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000014920	Exo_endo_phos	PF03372.23	1e-18	1	1
ENSPNAP00000032747	Exo_endo_phos	PF03372.23	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000022948	-	2883	-	ENSPNAP00000014920	298 (aa)	-	-
ENSPNAT00000022969	-	1664	XM_017722298	ENSPNAP00000032747	318 (aa)	XP_017577787	-

Gene Model

Click here to download ENSPNAG00000020897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000020897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000020897	apex1	96	65.424	ENSG00000100823	APEX1	98	64.479	Homo_sapiens
ENSPNAG00000020897	apex1	93	84.058	ENSAPOG00000017002	apex1	90	86.131	Acanthochromis_polyacanthus
ENSPNAG00000020897	apex1	96	64.068	ENSAMEG00000005418	APEX1	93	65.203	Ailuropoda_melanoleuca
ENSPNAG00000020897	apex1	85	89.328	ENSACIG00000010653	apex1	90	89.057	Amphilophus_citrinellus
ENSPNAG00000020897	apex1	96	84.211	ENSAOCG00000009649	apex1	92	84.266	Amphiprion_ocellaris
ENSPNAG00000020897	apex1	96	84.561	ENSAPEG00000021453	apex1	92	84.615	Amphiprion_percula
ENSPNAG00000020897	apex1	96	84.912	ENSATEG00000002883	apex1	99	78.413	Anabas_testudineus
ENSPNAG00000020897	apex1	85	75.099	ENSACAG00000008099	APEX1	91	69.966	Anolis_carolinensis
ENSPNAG00000020897	apex1	93	66.434	ENSANAG00000030117	APEX1	93	65.878	Aotus_nancymaae
ENSPNAG00000020897	apex1	84	90.837	ENSACLG00000018441	apex1	92	86.014	Astatotilapia_calliptera
ENSPNAG00000020897	apex1	96	93.056	ENSAMXG00000034699	apex1	96	90.333	Astyanax_mexicanus
ENSPNAG00000020897	apex1	96	63.390	ENSBTAG00000002745	APEX1	93	64.527	Bos_taurus
ENSPNAG00000020897	apex1	87	44.275	WBGene00001372	exo-3	95	43.478	Caenorhabditis_elegans
ENSPNAG00000020897	apex1	96	65.763	ENSCJAG00000009726	APEX1	93	65.878	Callithrix_jacchus
ENSPNAG00000020897	apex1	96	65.085	ENSCAFG00000032033	APEX1	93	65.203	Canis_familiaris
ENSPNAG00000020897	apex1	96	65.085	ENSCAFG00020014377	-	93	65.203	Canis_lupus_dingo
ENSPNAG00000020897	apex1	56	60.116	ENSCAFG00020023002	-	96	60.116	Canis_lupus_dingo
ENSPNAG00000020897	apex1	73	59.817	ENSCHIG00000014537	-	85	58.197	Capra_hircus
ENSPNAG00000020897	apex1	96	63.390	ENSCHIG00000007298	-	93	64.527	Capra_hircus
ENSPNAG00000020897	apex1	96	64.068	ENSTSYG00000034813	APEX1	93	64.189	Carlito_syrichta
ENSPNAG00000020897	apex1	82	62.151	ENSCAPG00000016235	APEX1	82	69.484	Cavia_aperea
ENSPNAG00000020897	apex1	96	65.763	ENSCPOG00000030909	APEX1	93	65.878	Cavia_porcellus
ENSPNAG00000020897	apex1	96	65.763	ENSCCAG00000033056	-	93	65.878	Cebus_capucinus
ENSPNAG00000020897	apex1	96	55.932	ENSCCAG00000031931	-	92	56.081	Cebus_capucinus
ENSPNAG00000020897	apex1	96	65.424	ENSCATG00000015580	APEX1	93	65.541	Cercocebus_atys
ENSPNAG00000020897	apex1	96	66.102	ENSCLAG00000001002	APEX1	93	66.216	Chinchilla_lanigera
ENSPNAG00000020897	apex1	96	65.763	ENSCSAG00000016685	-	93	65.878	Chlorocebus_sabaeus
ENSPNAG00000020897	apex1	96	65.763	ENSCSAG00000016670	-	93	65.878	Chlorocebus_sabaeus
ENSPNAG00000020897	apex1	96	70.205	ENSCPBG00000009567	APEX1	95	68.421	Chrysemys_picta_bellii
ENSPNAG00000020897	apex1	80	60.338	ENSCING00000008137	-	81	57.255	Ciona_intestinalis
ENSPNAG00000020897	apex1	93	48.780	ENSCSAVG00000007144	-	95	52.846	Ciona_savignyi
ENSPNAG00000020897	apex1	96	65.085	ENSCANG00000030726	APEX1	93	65.203	Colobus_angolensis_palliatus
ENSPNAG00000020897	apex1	93	65.035	ENSCGRG00001017046	Apex1	93	64.189	Cricetulus_griseus_chok1gshd
ENSPNAG00000020897	apex1	93	65.035	ENSCGRG00000008984	Apex1	93	64.189	Cricetulus_griseus_crigri
ENSPNAG00000020897	apex1	96	81.053	ENSCSEG00000017499	apex1	92	81.119	Cynoglossus_semilaevis
ENSPNAG00000020897	apex1	96	84.561	ENSCVAG00000022075	apex1	92	84.615	Cyprinodon_variegatus
ENSPNAG00000020897	apex1	96	85.017	ENSDARG00000045843	apex1	100	86.387	Danio_rerio
ENSPNAG00000020897	apex1	96	61.356	ENSDNOG00000042234	APEX1	88	62.500	Dasypus_novemcinctus
ENSPNAG00000020897	apex1	96	65.085	ENSDORG00000001616	Apex1	93	65.203	Dipodomys_ordii
ENSPNAG00000020897	apex1	96	65.085	ENSETEG00000004855	-	93	66.216	Echinops_telfairi
ENSPNAG00000020897	apex1	71	58.019	ENSEBUG00000000622	-	83	57.674	Eptatretus_burgeri
ENSPNAG00000020897	apex1	96	66.102	ENSEASG00005017489	APEX1	68	66.216	Equus_asinus_asinus
ENSPNAG00000020897	apex1	96	66.102	ENSECAG00000022325	APEX1	76	66.216	Equus_caballus
ENSPNAG00000020897	apex1	85	69.020	ENSEEUG00000012569	APEX1	93	68.165	Erinaceus_europaeus
ENSPNAG00000020897	apex1	96	87.153	ENSELUG00000021706	apex1	96	84.667	Esox_lucius
ENSPNAG00000020897	apex1	96	66.327	ENSFCAG00000030869	APEX1	93	66.216	Felis_catus
ENSPNAG00000020897	apex1	96	67.119	ENSFDAG00000006120	APEX1	93	67.230	Fukomys_damarensis
ENSPNAG00000020897	apex1	96	84.561	ENSFHEG00000009031	apex1	77	84.615	Fundulus_heteroclitus
ENSPNAG00000020897	apex1	96	77.544	ENSGMOG00000007943	apex1	92	77.622	Gadus_morhua
ENSPNAG00000020897	apex1	96	85.965	ENSGAFG00000005311	apex1	92	86.014	Gambusia_affinis
ENSPNAG00000020897	apex1	96	83.509	ENSGACG00000019497	apex1	100	80.669	Gasterosteus_aculeatus
ENSPNAG00000020897	apex1	96	70.548	ENSGAGG00000014999	APEX1	96	68.627	Gopherus_agassizii
ENSPNAG00000020897	apex1	96	65.085	ENSGGOG00000002128	APEX1	93	65.203	Gorilla_gorilla
ENSPNAG00000020897	apex1	96	85.965	ENSHBUG00000005894	apex1	92	86.014	Haplochromis_burtoni
ENSPNAG00000020897	apex1	96	66.780	ENSHGLG00000002848	APEX1	93	66.892	Heterocephalus_glaber_female
ENSPNAG00000020897	apex1	96	66.780	ENSHGLG00100017878	APEX1	93	66.892	Heterocephalus_glaber_male
ENSPNAG00000020897	apex1	95	84.507	ENSHCOG00000009961	apex1	92	83.972	Hippocampus_comes
ENSPNAG00000020897	apex1	93	91.367	ENSIPUG00000005799	apex1	96	87.960	Ictalurus_punctatus
ENSPNAG00000020897	apex1	96	65.424	ENSSTOG00000010096	APEX1	93	66.554	Ictidomys_tridecemlineatus
ENSPNAG00000020897	apex1	85	59.608	ENSJJAG00000020465	-	90	56.584	Jaculus_jaculus
ENSPNAG00000020897	apex1	96	64.746	ENSJJAG00000012067	-	93	64.865	Jaculus_jaculus
ENSPNAG00000020897	apex1	96	57.823	ENSJJAG00000003660	-	95	58.609	Jaculus_jaculus
ENSPNAG00000020897	apex1	96	84.561	ENSKMAG00000021171	apex1	92	84.615	Kryptolebias_marmoratus
ENSPNAG00000020897	apex1	93	85.145	ENSLBEG00000010248	apex1	92	84.266	Labrus_bergylta
ENSPNAG00000020897	apex1	96	75.000	ENSLACG00000008617	APEX1	98	71.753	Latimeria_chalumnae
ENSPNAG00000020897	apex1	96	81.034	ENSLOCG00000015516	apex1	92	80.822	Lepisosteus_oculatus
ENSPNAG00000020897	apex1	85	69.804	ENSLAFG00000021872	APEX1	93	64.407	Loxodonta_africana
ENSPNAG00000020897	apex1	96	65.085	ENSMFAG00000002565	APEX1	93	65.203	Macaca_fascicularis
ENSPNAG00000020897	apex1	96	65.085	ENSMMUG00000048039	APEX1	93	65.203	Macaca_mulatta
ENSPNAG00000020897	apex1	96	65.085	ENSMNEG00000036944	APEX1	93	65.203	Macaca_nemestrina
ENSPNAG00000020897	apex1	96	65.424	ENSMLEG00000042125	APEX1	93	65.541	Mandrillus_leucophaeus
ENSPNAG00000020897	apex1	93	86.957	ENSMAMG00000023526	apex1	92	85.664	Mastacembelus_armatus
ENSPNAG00000020897	apex1	84	90.837	ENSMZEG00005014187	apex1	92	86.014	Maylandia_zebra
ENSPNAG00000020897	apex1	93	64.912	ENSMAUG00000013994	Apex1	93	64.068	Mesocricetus_auratus
ENSPNAG00000020897	apex1	96	64.407	ENSMICG00000043554	APEX1	93	64.527	Microcebus_murinus
ENSPNAG00000020897	apex1	96	64.407	ENSMOCG00000013721	Apex1	93	64.527	Microtus_ochrogaster
ENSPNAG00000020897	apex1	96	84.965	ENSMMOG00000010031	apex1	90	85.017	Mola_mola
ENSPNAG00000020897	apex1	85	67.843	ENSMODG00000007125	APEX1	93	63.758	Monodelphis_domestica
ENSPNAG00000020897	apex1	86	81.641	ENSMALG00000011699	apex1	71	81.579	Monopterus_albus
ENSPNAG00000020897	apex1	96	65.763	MGP_CAROLIEiJ_G0019209	Apex1	100	62.011	Mus_caroli
ENSPNAG00000020897	apex1	96	65.763	ENSMUSG00000035960	Apex1	100	63.889	Mus_musculus
ENSPNAG00000020897	apex1	96	65.424	MGP_PahariEiJ_G0030232	Apex1	100	61.453	Mus_pahari
ENSPNAG00000020897	apex1	96	65.763	MGP_SPRETEiJ_G0020101	Apex1	100	62.011	Mus_spretus
ENSPNAG00000020897	apex1	96	64.646	ENSMLUG00000028957	APEX1	93	64.765	Myotis_lucifugus
ENSPNAG00000020897	apex1	96	50.784	ENSNGAG00000021748	-	99	50.784	Nannospalax_galili
ENSPNAG00000020897	apex1	96	65.085	ENSNGAG00000002725	-	93	65.203	Nannospalax_galili
ENSPNAG00000020897	apex1	84	91.235	ENSNBRG00000005334	apex1	84	86.364	Neolamprologus_brichardi
ENSPNAG00000020897	apex1	96	65.085	ENSNLEG00000010839	APEX1	93	65.203	Nomascus_leucogenys
ENSPNAG00000020897	apex1	96	63.356	ENSMEUG00000014519	APEX1	93	63.481	Notamacropus_eugenii
ENSPNAG00000020897	apex1	96	64.966	ENSOPRG00000014029	APEX1	93	65.085	Ochotona_princeps
ENSPNAG00000020897	apex1	92	49.648	ENSODEG00000004777	-	96	51.370	Octodon_degus
ENSPNAG00000020897	apex1	96	65.763	ENSODEG00000001703	-	93	65.878	Octodon_degus
ENSPNAG00000020897	apex1	91	54.122	ENSODEG00000006583	-	88	54.122	Octodon_degus
ENSPNAG00000020897	apex1	85	90.909	ENSONIG00000012089	apex1	92	86.014	Oreochromis_niloticus
ENSPNAG00000020897	apex1	84	69.600	ENSOANG00000008836	APEX1	77	63.259	Ornithorhynchus_anatinus
ENSPNAG00000020897	apex1	96	66.102	ENSOCUG00000005022	APEX1	93	66.216	Oryctolagus_cuniculus
ENSPNAG00000020897	apex1	96	86.364	ENSORLG00000012378	apex1	92	86.411	Oryzias_latipes
ENSPNAG00000020897	apex1	96	86.364	ENSORLG00020021371	apex1	92	86.411	Oryzias_latipes_hni
ENSPNAG00000020897	apex1	96	86.364	ENSORLG00015020089	apex1	92	86.411	Oryzias_latipes_hsok
ENSPNAG00000020897	apex1	96	87.063	ENSOMEG00000018876	apex1	92	87.108	Oryzias_melastigma
ENSPNAG00000020897	apex1	96	64.746	ENSOGAG00000013335	-	93	64.865	Otolemur_garnettii
ENSPNAG00000020897	apex1	85	59.608	ENSOGAG00000029355	-	90	58.304	Otolemur_garnettii
ENSPNAG00000020897	apex1	96	61.017	ENSOARG00000001876	-	96	62.162	Ovis_aries
ENSPNAG00000020897	apex1	96	63.390	ENSOARG00000019740	-	93	64.527	Ovis_aries
ENSPNAG00000020897	apex1	92	56.679	ENSOARG00000014424	-	93	55.172	Ovis_aries
ENSPNAG00000020897	apex1	96	65.424	ENSPPAG00000038760	APEX1	93	65.541	Pan_paniscus
ENSPNAG00000020897	apex1	96	65.424	ENSPPRG00000011794	APEX1	93	65.541	Panthera_pardus
ENSPNAG00000020897	apex1	96	66.102	ENSPTIG00000014829	APEX1	93	66.216	Panthera_tigris_altaica
ENSPNAG00000020897	apex1	96	65.424	ENSPTRG00000006093	APEX1	93	65.541	Pan_troglodytes
ENSPNAG00000020897	apex1	96	65.424	ENSPANG00000022757	APEX1	93	65.541	Papio_anubis
ENSPNAG00000020897	apex1	84	88.800	ENSPKIG00000003504	apex1	96	83.444	Paramormyrops_kingsleyae
ENSPNAG00000020897	apex1	82	76.230	ENSPMGG00000016596	apex1	75	73.930	Periophthalmus_magnuspinnatus
ENSPNAG00000020897	apex1	96	64.746	ENSPEMG00000019097	Apex1	93	64.865	Peromyscus_maniculatus_bairdii
ENSPNAG00000020897	apex1	89	72.119	ENSPMAG00000007275	-	96	70.213	Petromyzon_marinus
ENSPNAG00000020897	apex1	85	66.667	ENSPCIG00000023274	APEX1	93	62.963	Phascolarctos_cinereus
ENSPNAG00000020897	apex1	96	85.965	ENSPFOG00000004178	apex1	92	86.014	Poecilia_formosa
ENSPNAG00000020897	apex1	96	85.965	ENSPLAG00000012779	apex1	92	86.014	Poecilia_latipinna
ENSPNAG00000020897	apex1	96	85.965	ENSPMEG00000019623	apex1	92	86.014	Poecilia_mexicana
ENSPNAG00000020897	apex1	96	84.561	ENSPREG00000014298	apex1	92	84.615	Poecilia_reticulata
ENSPNAG00000020897	apex1	96	65.188	ENSPPYG00000005565	APEX1	93	65.203	Pongo_abelii
ENSPNAG00000020897	apex1	96	63.729	ENSPCAG00000010376	APEX1	93	63.851	Procavia_capensis
ENSPNAG00000020897	apex1	96	64.746	ENSPCOG00000021564	APEX1	93	64.865	Propithecus_coquereli
ENSPNAG00000020897	apex1	96	64.983	ENSPVAG00000010736	APEX1	93	65.101	Pteropus_vampyrus
ENSPNAG00000020897	apex1	84	91.235	ENSPNYG00000023940	apex1	92	86.364	Pundamilia_nyererei
ENSPNAG00000020897	apex1	96	65.085	ENSRNOG00000009663	Apex1	93	65.203	Rattus_norvegicus
ENSPNAG00000020897	apex1	96	65.424	ENSRBIG00000038325	APEX1	92	65.541	Rhinopithecus_bieti
ENSPNAG00000020897	apex1	96	57.292	ENSSBOG00000031372	-	92	57.439	Saimiri_boliviensis_boliviensis
ENSPNAG00000020897	apex1	96	65.763	ENSSBOG00000018921	-	93	65.878	Saimiri_boliviensis_boliviensis
ENSPNAG00000020897	apex1	85	65.891	ENSSHAG00000013524	APEX1	93	61.462	Sarcophilus_harrisii
ENSPNAG00000020897	apex1	96	83.217	ENSSFOG00015001948	apex1	93	82.986	Scleropages_formosus
ENSPNAG00000020897	apex1	85	88.142	ENSSMAG00000013348	apex1	92	82.818	Scophthalmus_maximus
ENSPNAG00000020897	apex1	96	85.263	ENSSDUG00000016377	apex1	92	85.315	Seriola_dumerili
ENSPNAG00000020897	apex1	96	85.263	ENSSLDG00000023005	apex1	92	85.315	Seriola_lalandi_dorsalis
ENSPNAG00000020897	apex1	87	72.587	ENSSPUG00000000531	APEX1	92	70.330	Sphenodon_punctatus
ENSPNAG00000020897	apex1	96	82.807	ENSSPAG00000000458	apex1	92	82.918	Stegastes_partitus
ENSPNAG00000020897	apex1	96	63.729	ENSSSCG00000040060	-	93	65.203	Sus_scrofa
ENSPNAG00000020897	apex1	70	47.222	ENSSSCG00000039705	-	79	47.222	Sus_scrofa
ENSPNAG00000020897	apex1	70	57.895	ENSTGUG00000014378	APEX1	90	57.547	Taeniopygia_guttata
ENSPNAG00000020897	apex1	85	87.352	ENSTRUG00000004268	apex1	87	82.517	Takifugu_rubripes
ENSPNAG00000020897	apex1	96	82.807	ENSTNIG00000005778	apex1	99	77.597	Tetraodon_nigroviridis
ENSPNAG00000020897	apex1	96	62.373	ENSTBEG00000006405	APEX1	96	61.889	Tupaia_belangeri
ENSPNAG00000020897	apex1	71	66.351	ENSTTRG00000007860	APEX1	90	66.509	Tursiops_truncatus
ENSPNAG00000020897	apex1	96	65.085	ENSUAMG00000010457	APEX1	93	65.203	Ursus_americanus
ENSPNAG00000020897	apex1	96	65.085	ENSUMAG00000009178	APEX1	93	65.203	Ursus_maritimus
ENSPNAG00000020897	apex1	72	63.721	ENSVPAG00000005083	APEX1	91	63.721	Vicugna_pacos
ENSPNAG00000020897	apex1	96	64.746	ENSVVUG00000009010	APEX1	93	64.865	Vulpes_vulpes
ENSPNAG00000020897	apex1	96	69.863	ENSXETG00000024773	apex1	96	68.750	Xenopus_tropicalis
ENSPNAG00000020897	apex1	96	85.965	ENSXCOG00000015233	apex1	92	86.014	Xiphophorus_couchianus
ENSPNAG00000020897	apex1	96	85.965	ENSXMAG00000006195	apex1	92	86.014	Xiphophorus_maculatus