EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000020962 (Gene tree)
Gene ID: 108432315
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 48168 bases
Position: chrKV575402.1:607057-655224
Accession: 108432315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000014861	Val_tRNA-synt_C	PF10458.9	1.3e-05	1	1
ENSPNAP00000032731	Val_tRNA-synt_C	PF10458.9	1.5e-05	1	1
ENSPNAP00000014861	tRNA-synt_1g	PF09334.11	1e-12	1	1
ENSPNAP00000032731	tRNA-synt_1g	PF09334.11	1.4e-12	1	1
ENSPNAP00000014861	Anticodon_1	PF08264.13	9.9e-36	1	1
ENSPNAP00000032731	Anticodon_1	PF08264.13	3.2e-35	1	1
ENSPNAP00000014861	tRNA-synt_1	PF00133.22	1.9e-206	1	1
ENSPNAP00000032731	tRNA-synt_1	PF00133.22	3.7e-206	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000022895	-	3522	-	ENSPNAP00000014861	1173 (aa)	-	-
ENSPNAT00000037508	-	5087	XM_017706065	ENSPNAP00000032731	1274 (aa)	XP_017561554	-

Gene Model

Click here to download ENSPNAG00000020962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000020962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000020962	vars	83	50.856	ENSPNAG00000026793	vars2	92	51.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000020962	vars	100	64.313	ENSG00000204394	VARS	99	72.393	Homo_sapiens
ENSPNAG00000020962	vars	94	84.341	ENSAPOG00000020691	vars	96	83.844	Acanthochromis_polyacanthus
ENSPNAG00000020962	vars	94	84.341	ENSAPOG00000020921	vars	96	83.844	Acanthochromis_polyacanthus
ENSPNAG00000020962	vars	100	65.116	ENSAMEG00000006417	VARS	100	65.194	Ailuropoda_melanoleuca
ENSPNAG00000020962	vars	100	83.229	ENSACIG00000013752	vars	100	82.995	Amphilophus_citrinellus
ENSPNAG00000020962	vars	100	84.910	ENSAOCG00000002447	vars	99	84.676	Amphiprion_ocellaris
ENSPNAG00000020962	vars	100	84.910	ENSAPEG00000010638	vars	99	84.676	Amphiprion_percula
ENSPNAG00000020962	vars	100	81.206	ENSATEG00000020219	vars	100	81.206	Anabas_testudineus
ENSPNAG00000020962	vars	89	81.390	ENSACAG00000029133	-	99	70.895	Anolis_carolinensis
ENSPNAG00000020962	vars	100	64.546	ENSANAG00000015453	VARS	100	64.701	Aotus_nancymaae
ENSPNAG00000020962	vars	100	83.997	ENSACLG00000025699	vars	97	83.763	Astatotilapia_calliptera
ENSPNAG00000020962	vars	94	89.185	ENSAMXG00000017716	vars	95	89.185	Astyanax_mexicanus
ENSPNAG00000020962	vars	100	65.167	ENSBTAG00000005631	VARS	100	65.477	Bos_taurus
ENSPNAG00000020962	vars	100	64.286	ENSCJAG00000002604	VARS	100	64.441	Callithrix_jacchus
ENSPNAG00000020962	vars	100	64.624	ENSCAFG00000000636	VARS	100	64.601	Canis_familiaris
ENSPNAG00000020962	vars	94	66.088	ENSCAFG00020020790	VARS	96	66.061	Canis_lupus_dingo
ENSPNAG00000020962	vars	100	65.167	ENSCHIG00000011008	VARS	100	65.477	Capra_hircus
ENSPNAG00000020962	vars	100	64.779	ENSTSYG00000001567	VARS	100	64.779	Carlito_syrichta
ENSPNAG00000020962	vars	90	68.852	ENSCAPG00000013736	VARS	97	68.517	Cavia_aperea
ENSPNAG00000020962	vars	100	64.884	ENSCPOG00000000870	VARS	100	64.856	Cavia_porcellus
ENSPNAG00000020962	vars	100	64.313	ENSCCAG00000035656	VARS	100	64.469	Cebus_capucinus
ENSPNAG00000020962	vars	100	64.701	ENSCATG00000022394	VARS	100	64.934	Cercocebus_atys
ENSPNAG00000020962	vars	93	64.134	ENSCLAG00000009470	VARS	97	63.659	Chinchilla_lanigera
ENSPNAG00000020962	vars	100	64.469	ENSCSAG00000008784	VARS	100	64.624	Chlorocebus_sabaeus
ENSPNAG00000020962	vars	83	75.464	ENSCPBG00000007943	VARS	96	75.464	Chrysemys_picta_bellii
ENSPNAG00000020962	vars	100	64.624	ENSCANG00000033570	VARS	100	64.779	Colobus_angolensis_palliatus
ENSPNAG00000020962	vars	100	65.089	ENSCGRG00001005686	Vars	100	65.322	Cricetulus_griseus_chok1gshd
ENSPNAG00000020962	vars	93	63.300	ENSCGRG00000013352	Vars	78	63.547	Cricetulus_griseus_crigri
ENSPNAG00000020962	vars	100	78.717	ENSCSEG00000019652	vars	100	79.030	Cynoglossus_semilaevis
ENSPNAG00000020962	vars	100	84.543	ENSCVAG00000022398	vars	100	83.919	Cyprinodon_variegatus
ENSPNAG00000020962	vars	100	86.824	ENSDARG00000044575	vars	100	86.902	Danio_rerio
ENSPNAG00000020962	vars	87	69.792	ENSDORG00000016433	Vars	93	71.660	Dipodomys_ordii
ENSPNAG00000020962	vars	69	74.864	ENSETEG00000003824	VARS	77	74.864	Echinops_telfairi
ENSPNAG00000020962	vars	62	65.981	ENSEBUG00000004637	vars	100	66.255	Eptatretus_burgeri
ENSPNAG00000020962	vars	56	73.693	ENSEBUG00000007086	vars	83	73.693	Eptatretus_burgeri
ENSPNAG00000020962	vars	100	65.015	ENSEASG00005015673	VARS	100	65.170	Equus_asinus_asinus
ENSPNAG00000020962	vars	100	65.170	ENSECAG00000014620	VARS	100	65.015	Equus_caballus
ENSPNAG00000020962	vars	72	70.927	ENSEEUG00000004116	VARS	73	70.927	Erinaceus_europaeus
ENSPNAG00000020962	vars	100	83.268	ENSELUG00000006550	vars	97	83.268	Esox_lucius
ENSPNAG00000020962	vars	100	65.167	ENSFCAG00000004510	VARS	100	65.066	Felis_catus
ENSPNAG00000020962	vars	87	71.156	ENSFDAG00000011401	VARS	100	70.268	Fukomys_damarensis
ENSPNAG00000020962	vars	100	83.450	ENSFHEG00000010672	vars	100	82.826	Fundulus_heteroclitus
ENSPNAG00000020962	vars	100	79.037	ENSGMOG00000014908	vars	100	79.517	Gadus_morhua
ENSPNAG00000020962	vars	100	84.412	ENSGAFG00000021630	vars	100	83.997	Gambusia_affinis
ENSPNAG00000020962	vars	100	80.564	ENSGACG00000009601	vars	100	80.878	Gasterosteus_aculeatus
ENSPNAG00000020962	vars	50	58.411	ENSGAGG00000006508	-	91	59.813	Gopherus_agassizii
ENSPNAG00000020962	vars	100	64.624	ENSGGOG00000011364	VARS	100	64.701	Gorilla_gorilla
ENSPNAG00000020962	vars	100	84.075	ENSHBUG00000017151	vars	97	83.841	Haplochromis_burtoni
ENSPNAG00000020962	vars	100	64.934	ENSHGLG00000011646	VARS	100	64.779	Heterocephalus_glaber_female
ENSPNAG00000020962	vars	93	61.633	ENSHGLG00100018062	VARS	99	61.905	Heterocephalus_glaber_male
ENSPNAG00000020962	vars	99	80.986	ENSHCOG00000012198	vars	97	84.109	Hippocampus_comes
ENSPNAG00000020962	vars	100	88.226	ENSIPUG00000005218	vars	100	88.226	Ictalurus_punctatus
ENSPNAG00000020962	vars	100	64.701	ENSSTOG00000013112	VARS	100	64.701	Ictidomys_tridecemlineatus
ENSPNAG00000020962	vars	100	52.660	ENSJJAG00000015343	-	99	54.073	Jaculus_jaculus
ENSPNAG00000020962	vars	100	63.861	ENSJJAG00000019749	-	100	64.053	Jaculus_jaculus
ENSPNAG00000020962	vars	100	81.754	ENSKMAG00000009455	vars	100	81.989	Kryptolebias_marmoratus
ENSPNAG00000020962	vars	100	84.770	ENSLBEG00000010341	vars	100	80.251	Labrus_bergylta
ENSPNAG00000020962	vars	91	72.806	ENSLACG00000015232	VARS	99	66.612	Latimeria_chalumnae
ENSPNAG00000020962	vars	100	75.039	ENSLOCG00000004240	vars	100	75.430	Lepisosteus_oculatus
ENSPNAG00000020962	vars	100	64.236	ENSLAFG00000023090	VARS	100	64.158	Loxodonta_africana
ENSPNAG00000020962	vars	100	64.546	ENSMFAG00000001032	VARS	100	64.779	Macaca_fascicularis
ENSPNAG00000020962	vars	100	64.546	ENSMMUG00000006828	VARS	100	64.779	Macaca_mulatta
ENSPNAG00000020962	vars	100	64.546	ENSMNEG00000042072	VARS	100	64.779	Macaca_nemestrina
ENSPNAG00000020962	vars	100	64.624	ENSMLEG00000039307	VARS	100	64.856	Mandrillus_leucophaeus
ENSPNAG00000020962	vars	100	84.910	ENSMAMG00000003949	vars	100	84.832	Mastacembelus_armatus
ENSPNAG00000020962	vars	100	84.075	ENSMZEG00005018327	vars	97	83.997	Maylandia_zebra
ENSPNAG00000020962	vars	100	65.012	ENSMAUG00000006715	Vars	100	65.244	Mesocricetus_auratus
ENSPNAG00000020962	vars	100	64.788	ENSMICG00000003548	VARS	100	64.783	Microcebus_murinus
ENSPNAG00000020962	vars	100	65.088	ENSMOCG00000015404	Vars	100	65.088	Microtus_ochrogaster
ENSPNAG00000020962	vars	100	80.456	ENSMMOG00000015801	vars	100	80.456	Mola_mola
ENSPNAG00000020962	vars	100	65.373	ENSMODG00000015204	-	100	65.528	Monodelphis_domestica
ENSPNAG00000020962	vars	99	83.750	ENSMALG00000022532	vars	99	83.594	Monopterus_albus
ENSPNAG00000020962	vars	100	65.376	MGP_CAROLIEiJ_G0021491	Vars	100	65.400	Mus_caroli
ENSPNAG00000020962	vars	100	65.089	ENSMUSG00000007029	Vars	100	65.244	Mus_musculus
ENSPNAG00000020962	vars	100	65.221	MGP_PahariEiJ_G0020486	Vars	100	65.244	Mus_pahari
ENSPNAG00000020962	vars	100	65.167	MGP_SPRETEiJ_G0022396	Vars	100	65.322	Mus_spretus
ENSPNAG00000020962	vars	100	65.167	ENSMPUG00000010821	VARS	100	65.167	Mustela_putorius_furo
ENSPNAG00000020962	vars	78	67.294	ENSMLUG00000013126	VARS	100	67.031	Myotis_lucifugus
ENSPNAG00000020962	vars	100	65.298	ENSNGAG00000012151	Vars	100	65.221	Nannospalax_galili
ENSPNAG00000020962	vars	100	83.841	ENSNBRG00000020520	vars	100	83.607	Neolamprologus_brichardi
ENSPNAG00000020962	vars	100	64.391	ENSNLEG00000006351	VARS	100	64.624	Nomascus_leucogenys
ENSPNAG00000020962	vars	97	72.811	ENSMEUG00000011378	VARS	96	73.038	Notamacropus_eugenii
ENSPNAG00000020962	vars	100	64.856	ENSOPRG00000003607	VARS	100	64.934	Ochotona_princeps
ENSPNAG00000020962	vars	100	64.496	ENSODEG00000017681	VARS	100	64.313	Octodon_degus
ENSPNAG00000020962	vars	100	83.605	ENSONIG00000013064	vars	100	85.851	Oreochromis_niloticus
ENSPNAG00000020962	vars	77	67.020	ENSOANG00000005400	VARS	98	66.784	Ornithorhynchus_anatinus
ENSPNAG00000020962	vars	100	63.538	ENSOCUG00000022463	VARS	100	63.223	Oryctolagus_cuniculus
ENSPNAG00000020962	vars	100	82.844	ENSORLG00000013063	vars	100	82.686	Oryzias_latipes
ENSPNAG00000020962	vars	100	83.463	ENSORLG00020003504	vars	100	83.229	Oryzias_latipes_hni
ENSPNAG00000020962	vars	100	83.607	ENSORLG00015009001	vars	100	83.372	Oryzias_latipes_hsok
ENSPNAG00000020962	vars	100	83.607	ENSOMEG00000015016	vars	100	83.372	Oryzias_melastigma
ENSPNAG00000020962	vars	100	64.313	ENSOGAG00000007515	VARS	100	64.236	Otolemur_garnettii
ENSPNAG00000020962	vars	100	64.546	ENSPPAG00000034012	VARS	100	64.701	Pan_paniscus
ENSPNAG00000020962	vars	100	65.322	ENSPPRG00000014855	VARS	100	65.221	Panthera_pardus
ENSPNAG00000020962	vars	85	69.753	ENSPTIG00000010462	VARS	93	69.625	Panthera_tigris_altaica
ENSPNAG00000020962	vars	100	64.546	ENSPTRG00000017985	VARS	100	64.701	Pan_troglodytes
ENSPNAG00000020962	vars	100	63.166	ENSPANG00000014565	VARS	100	63.398	Papio_anubis
ENSPNAG00000020962	vars	100	82.087	ENSPKIG00000016304	vars	100	82.243	Paramormyrops_kingsleyae
ENSPNAG00000020962	vars	100	81.676	ENSPMGG00000023909	vars	100	81.676	Periophthalmus_magnuspinnatus
ENSPNAG00000020962	vars	100	65.167	ENSPEMG00000006639	Vars	100	65.322	Peromyscus_maniculatus_bairdii
ENSPNAG00000020962	vars	100	65.089	ENSPCIG00000018553	VARS	100	65.167	Phascolarctos_cinereus
ENSPNAG00000020962	vars	100	84.256	ENSPFOG00000015690	vars	100	83.919	Poecilia_formosa
ENSPNAG00000020962	vars	100	84.334	ENSPLAG00000009590	vars	100	83.997	Poecilia_latipinna
ENSPNAG00000020962	vars	100	84.256	ENSPMEG00000004708	vars	100	83.919	Poecilia_mexicana
ENSPNAG00000020962	vars	95	88.308	ENSPREG00000013264	vars	99	88.308	Poecilia_reticulata
ENSPNAG00000020962	vars	100	62.917	ENSPPYG00000016460	VARS	100	63.072	Pongo_abelii
ENSPNAG00000020962	vars	86	67.972	ENSPCAG00000013565	VARS	86	68.149	Procavia_capensis
ENSPNAG00000020962	vars	100	65.012	ENSPCOG00000010942	VARS	100	64.856	Propithecus_coquereli
ENSPNAG00000020962	vars	95	69.378	ENSPVAG00000012403	VARS	100	62.607	Pteropus_vampyrus
ENSPNAG00000020962	vars	100	84.153	ENSPNYG00000022511	vars	100	83.919	Pundamilia_nyererei
ENSPNAG00000020962	vars	100	64.756	ENSRNOG00000000867	Vars	100	64.856	Rattus_norvegicus
ENSPNAG00000020962	vars	100	64.546	ENSRBIG00000041669	VARS	100	64.701	Rhinopithecus_bieti
ENSPNAG00000020962	vars	100	64.546	ENSRROG00000045490	VARS	100	64.701	Rhinopithecus_roxellana
ENSPNAG00000020962	vars	100	64.236	ENSSBOG00000035402	VARS	100	64.391	Saimiri_boliviensis_boliviensis
ENSPNAG00000020962	vars	100	64.479	ENSSHAG00000006937	VARS	100	65.123	Sarcophilus_harrisii
ENSPNAG00000020962	vars	100	81.045	ENSSFOG00015014272	vars	99	86.687	Scleropages_formosus
ENSPNAG00000020962	vars	100	82.697	ENSSMAG00000009596	vars	99	82.826	Scophthalmus_maximus
ENSPNAG00000020962	vars	100	85.012	ENSSDUG00000014177	vars	100	84.934	Seriola_dumerili
ENSPNAG00000020962	vars	100	84.699	ENSSLDG00000025316	vars	100	84.621	Seriola_lalandi_dorsalis
ENSPNAG00000020962	vars	100	84.050	ENSSPAG00000017068	vars	100	83.972	Stegastes_partitus
ENSPNAG00000020962	vars	100	65.477	ENSSSCG00000038950	VARS	100	65.167	Sus_scrofa
ENSPNAG00000020962	vars	82	77.238	ENSTRUG00000012307	vars	98	76.945	Takifugu_rubripes
ENSPNAG00000020962	vars	100	81.109	ENSTNIG00000008011	vars	100	81.030	Tetraodon_nigroviridis
ENSPNAG00000020962	vars	100	58.960	ENSTTRG00000014128	VARS	100	59.193	Tursiops_truncatus
ENSPNAG00000020962	vars	100	63.313	ENSUAMG00000010424	VARS	100	63.390	Ursus_americanus
ENSPNAG00000020962	vars	100	60.202	ENSUMAG00000013486	VARS	98	65.116	Ursus_maritimus
ENSPNAG00000020962	vars	100	65.015	ENSVVUG00000021323	VARS	100	64.524	Vulpes_vulpes
ENSPNAG00000020962	vars	100	64.031	ENSXETG00000024076	vars	100	64.003	Xenopus_tropicalis
ENSPNAG00000020962	vars	100	82.358	ENSXCOG00000019172	vars	100	82.123	Xiphophorus_couchianus
ENSPNAG00000020962	vars	100	84.100	ENSXMAG00000010927	vars	100	83.685	Xiphophorus_maculatus