EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000021118 (Gene tree)
Gene ID: 108444114
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: zinc finger protein Gfi-1b-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 16708 bases
Position: chrKV575904.1:88536-105243
Accession: 108444114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000015097	zf-C2H2	PF00096.26	2.2e-25	1	5
ENSPNAP00000015097	zf-C2H2	PF00096.26	2.2e-25	2	5
ENSPNAP00000015097	zf-C2H2	PF00096.26	2.2e-25	3	5
ENSPNAP00000015097	zf-C2H2	PF00096.26	2.2e-25	4	5
ENSPNAP00000015097	zf-C2H2	PF00096.26	2.2e-25	5	5
ENSPNAP00000015097	zf-met	PF12874.7	3.4e-09	1	2
ENSPNAP00000015097	zf-met	PF12874.7	3.4e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000023202	-	6000	XM_017725095	ENSPNAP00000015097	331 (aa)	XP_017580584	UPI00081472FF

Gene Model

Click here to download ENSPNAG00000021118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000021118	gfi1b	89	43.125	ENSPNAG00000017479	-	83	43.125
ENSPNAG00000021118	gfi1b	61	44.375	ENSPNAG00000018644	-	98	44.375
ENSPNAG00000021118	gfi1b	55	42.138	ENSPNAG00000017468	-	91	42.138
ENSPNAG00000021118	gfi1b	50	47.222	ENSPNAG00000003702	-	87	43.537
ENSPNAG00000021118	gfi1b	53	45.000	ENSPNAG00000012215	-	84	45.000
ENSPNAG00000021118	gfi1b	56	45.181	ENSPNAG00000029386	-	86	45.181
ENSPNAG00000021118	gfi1b	52	33.129	ENSPNAG00000024123	snai1b	56	33.129
ENSPNAG00000021118	gfi1b	58	42.953	ENSPNAG00000011660	-	56	42.953
ENSPNAG00000021118	gfi1b	61	42.500	ENSPNAG00000002287	-	93	42.500
ENSPNAG00000021118	gfi1b	74	44.048	ENSPNAG00000000303	-	64	44.706
ENSPNAG00000021118	gfi1b	85	43.125	ENSPNAG00000002209	-	96	43.125
ENSPNAG00000021118	gfi1b	77	43.125	ENSPNAG00000018471	-	76	43.125
ENSPNAG00000021118	gfi1b	67	40.625	ENSPNAG00000012366	-	85	40.625
ENSPNAG00000021118	gfi1b	56	40.854	ENSPNAG00000026181	prdm5	72	40.854
ENSPNAG00000021118	gfi1b	64	38.095	ENSPNAG00000025211	-	68	38.095
ENSPNAG00000021118	gfi1b	60	42.254	ENSPNAG00000007072	-	90	42.254
ENSPNAG00000021118	gfi1b	79	43.125	ENSPNAG00000000783	-	87	43.125
ENSPNAG00000021118	gfi1b	75	42.336	ENSPNAG00000009741	-	73	42.336
ENSPNAG00000021118	gfi1b	54	35.616	ENSPNAG00000021304	PRDM15	56	35.616
ENSPNAG00000021118	gfi1b	60	41.353	ENSPNAG00000021863	-	90	40.523
ENSPNAG00000021118	gfi1b	72	43.125	ENSPNAG00000019534	-	86	43.125
ENSPNAG00000021118	gfi1b	69	33.036	ENSPNAG00000011679	-	66	33.036
ENSPNAG00000021118	gfi1b	56	38.415	ENSPNAG00000023191	-	78	38.415
ENSPNAG00000021118	gfi1b	64	43.827	ENSPNAG00000005857	-	87	43.827
ENSPNAG00000021118	gfi1b	50	43.333	ENSPNAG00000018409	-	84	43.333
ENSPNAG00000021118	gfi1b	62	41.885	ENSPNAG00000007265	-	95	41.885
ENSPNAG00000021118	gfi1b	50	45.946	ENSPNAG00000027880	-	53	45.946
ENSPNAG00000021118	gfi1b	100	43.011	ENSPNAG00000017138	znf236	95	40.351
ENSPNAG00000021118	gfi1b	74	43.609	ENSPNAG00000006535	znf319b	85	43.609
ENSPNAG00000021118	gfi1b	53	43.038	ENSPNAG00000012206	-	95	43.038
ENSPNAG00000021118	gfi1b	51	43.617	ENSPNAG00000006821	-	89	43.617
ENSPNAG00000021118	gfi1b	53	43.312	ENSPNAG00000007266	-	98	45.631
ENSPNAG00000021118	gfi1b	98	42.687	ENSPNAG00000014299	-	98	42.687
ENSPNAG00000021118	gfi1b	52	40.476	ENSPNAG00000009164	-	84	40.476
ENSPNAG00000021118	gfi1b	50	43.396	ENSPNAG00000007237	-	68	43.396
ENSPNAG00000021118	gfi1b	77	44.545	ENSPNAG00000028765	-	83	44.545
ENSPNAG00000021118	gfi1b	80	43.571	ENSPNAG00000003017	-	87	43.571
ENSPNAG00000021118	gfi1b	51	45.000	ENSPNAG00000017455	-	76	45.000
ENSPNAG00000021118	gfi1b	53	39.259	ENSPNAG00000010678	-	95	42.424
ENSPNAG00000021118	gfi1b	83	42.405	ENSPNAG00000025570	-	99	42.405
ENSPNAG00000021118	gfi1b	50	40.741	ENSPNAG00000004042	si:ch211-166g5.4	65	39.130
ENSPNAG00000021118	gfi1b	50	41.892	ENSPNAG00000015896	snai2	55	41.892
ENSPNAG00000021118	gfi1b	51	41.558	ENSPNAG00000000488	-	80	41.558
ENSPNAG00000021118	gfi1b	57	36.782	ENSPNAG00000005946	-	91	36.782
ENSPNAG00000021118	gfi1b	81	44.681	ENSPNAG00000012495	-	79	44.681
ENSPNAG00000021118	gfi1b	77	44.375	ENSPNAG00000005829	-	88	44.375
ENSPNAG00000021118	gfi1b	53	38.889	ENSPNAG00000022072	si:dkey-89b17.4	54	38.889
ENSPNAG00000021118	gfi1b	51	50.000	ENSPNAG00000025882	-	62	50.000
ENSPNAG00000021118	gfi1b	50	36.036	ENSPNAG00000001150	znf648	57	36.036
ENSPNAG00000021118	gfi1b	100	50.529	ENSPNAG00000028014	GFI1	100	50.529
ENSPNAG00000021118	gfi1b	52	41.139	ENSPNAG00000010752	-	80	40.909
ENSPNAG00000021118	gfi1b	56	41.250	ENSPNAG00000006039	-	90	41.250
ENSPNAG00000021118	gfi1b	70	42.500	ENSPNAG00000000066	-	91	42.500
ENSPNAG00000021118	gfi1b	82	42.073	ENSPNAG00000004784	-	53	42.073
ENSPNAG00000021118	gfi1b	50	45.946	ENSPNAG00000017415	scrt1a	53	45.946
ENSPNAG00000021118	gfi1b	55	42.500	ENSPNAG00000009184	-	80	42.500
ENSPNAG00000021118	gfi1b	81	44.375	ENSPNAG00000021075	-	95	44.375
ENSPNAG00000021118	gfi1b	60	42.500	ENSPNAG00000010317	-	86	42.500
ENSPNAG00000021118	gfi1b	52	38.776	ENSPNAG00000027229	znf341	53	38.776
ENSPNAG00000021118	gfi1b	53	39.773	ENSPNAG00000016198	ovol1b	66	39.773
ENSPNAG00000021118	gfi1b	56	45.000	ENSPNAG00000018437	-	82	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000021118	gfi1b	100	70.359	ENSAPOG00000001296	gfi1b	100	70.359	Acanthochromis_polyacanthus
ENSPNAG00000021118	gfi1b	73	81.743	ENSACIG00000002190	gfi1b	80	81.743	Amphilophus_citrinellus
ENSPNAG00000021118	gfi1b	100	70.783	ENSAOCG00000021187	gfi1b	100	70.783	Amphiprion_ocellaris
ENSPNAG00000021118	gfi1b	100	70.783	ENSAPEG00000016196	gfi1b	100	70.783	Amphiprion_percula
ENSPNAG00000021118	gfi1b	100	73.214	ENSATEG00000002534	gfi1b	100	73.214	Anabas_testudineus
ENSPNAG00000021118	gfi1b	100	60.831	ENSAPLG00000003373	GFI1B	100	60.831	Anas_platyrhynchos
ENSPNAG00000021118	gfi1b	100	68.452	ENSACLG00000027053	gfi1b	100	68.452	Astatotilapia_calliptera
ENSPNAG00000021118	gfi1b	100	88.024	ENSAMXG00000037544	GFI1B	100	88.024	Astyanax_mexicanus
ENSPNAG00000021118	gfi1b	100	60.299	ENSCAPG00000010404	GFI1B	100	60.299	Cavia_aperea
ENSPNAG00000021118	gfi1b	100	59.483	ENSCPBG00000021186	GFI1B	100	59.483	Chrysemys_picta_bellii
ENSPNAG00000021118	gfi1b	100	69.027	ENSCSEG00000001315	gfi1b	100	69.027	Cynoglossus_semilaevis
ENSPNAG00000021118	gfi1b	100	68.882	ENSCVAG00000017168	gfi1b	100	68.882	Cyprinodon_variegatus
ENSPNAG00000021118	gfi1b	100	77.015	ENSDARG00000079947	gfi1b	99	89.030	Danio_rerio
ENSPNAG00000021118	gfi1b	62	55.392	ENSEEUG00000012609	-	90	55.392	Erinaceus_europaeus
ENSPNAG00000021118	gfi1b	100	73.964	ENSELUG00000016933	gfi1b	100	73.964	Esox_lucius
ENSPNAG00000021118	gfi1b	100	57.104	ENSFALG00000001479	GFI1B	100	57.104	Ficedula_albicollis
ENSPNAG00000021118	gfi1b	100	71.772	ENSFHEG00000015138	gfi1b	100	71.772	Fundulus_heteroclitus
ENSPNAG00000021118	gfi1b	73	80.658	ENSGMOG00000019123	gfi1b	91	80.658	Gadus_morhua
ENSPNAG00000021118	gfi1b	100	60.767	ENSGALG00000003478	GFI1B	100	60.767	Gallus_gallus
ENSPNAG00000021118	gfi1b	71	85.043	ENSGAFG00000003059	gfi1b	100	85.043	Gambusia_affinis
ENSPNAG00000021118	gfi1b	100	64.624	ENSGACG00000018134	gfi1b	100	64.624	Gasterosteus_aculeatus
ENSPNAG00000021118	gfi1b	100	59.599	ENSGAGG00000021327	GFI1B	100	59.599	Gopherus_agassizii
ENSPNAG00000021118	gfi1b	100	68.452	ENSHBUG00000005451	gfi1b	100	68.452	Haplochromis_burtoni
ENSPNAG00000021118	gfi1b	100	70.958	ENSHCOG00000013713	gfi1b	100	70.958	Hippocampus_comes
ENSPNAG00000021118	gfi1b	100	80.967	ENSIPUG00000012769	gfi1b	100	80.967	Ictalurus_punctatus
ENSPNAG00000021118	gfi1b	99	55.291	ENSJJAG00000016355	Gfi1b	100	55.291	Jaculus_jaculus
ENSPNAG00000021118	gfi1b	100	68.935	ENSKMAG00000016047	gfi1b	100	68.935	Kryptolebias_marmoratus
ENSPNAG00000021118	gfi1b	100	71.257	ENSLBEG00000020297	gfi1b	99	71.257	Labrus_bergylta
ENSPNAG00000021118	gfi1b	100	61.111	ENSLACG00000012207	GFI1B	100	61.111	Latimeria_chalumnae
ENSPNAG00000021118	gfi1b	100	70.968	ENSLOCG00000005750	gfi1b	100	70.968	Lepisosteus_oculatus
ENSPNAG00000021118	gfi1b	100	60.641	ENSLAFG00000022367	GFI1B	100	60.641	Loxodonta_africana
ENSPNAG00000021118	gfi1b	100	72.156	ENSMAMG00000003040	gfi1b	100	72.156	Mastacembelus_armatus
ENSPNAG00000021118	gfi1b	99	68.657	ENSMZEG00005015594	gfi1b	99	68.657	Maylandia_zebra
ENSPNAG00000021118	gfi1b	100	61.047	ENSMGAG00000006129	GFI1B	100	61.047	Meleagris_gallopavo
ENSPNAG00000021118	gfi1b	100	70.659	ENSMMOG00000011764	gfi1b	100	70.659	Mola_mola
ENSPNAG00000021118	gfi1b	100	55.228	ENSMODG00000012600	GFI1B	100	55.228	Monodelphis_domestica
ENSPNAG00000021118	gfi1b	100	69.436	ENSMALG00000004034	gfi1b	100	69.436	Monopterus_albus
ENSPNAG00000021118	gfi1b	99	62.315	ENSNGAG00000003333	Gfi1b	100	62.315	Nannospalax_galili
ENSPNAG00000021118	gfi1b	100	68.843	ENSNBRG00000012391	gfi1b	100	68.843	Neolamprologus_brichardi
ENSPNAG00000021118	gfi1b	100	68.060	ENSONIG00000013011	gfi1b	96	87.701	Oreochromis_niloticus
ENSPNAG00000021118	gfi1b	100	61.062	ENSOANG00000014723	GFI1B	100	61.062	Ornithorhynchus_anatinus
ENSPNAG00000021118	gfi1b	100	53.392	ENSORLG00000014390	GFI1B	96	60.627	Oryzias_latipes
ENSPNAG00000021118	gfi1b	100	67.257	ENSORLG00020003719	GFI1B	100	67.257	Oryzias_latipes_hni
ENSPNAG00000021118	gfi1b	100	67.868	ENSORLG00015017142	gfi1b	100	67.868	Oryzias_latipes_hsok
ENSPNAG00000021118	gfi1b	100	67.164	ENSOMEG00000015149	GFI1B	100	67.069	Oryzias_melastigma
ENSPNAG00000021118	gfi1b	100	59.770	ENSOGAG00000008879	GFI1B	100	61.471	Otolemur_garnettii
ENSPNAG00000021118	gfi1b	100	73.256	ENSPKIG00000007643	gfi1b	100	73.256	Paramormyrops_kingsleyae
ENSPNAG00000021118	gfi1b	100	61.017	ENSPSIG00000012112	GFI1B	100	61.017	Pelodiscus_sinensis
ENSPNAG00000021118	gfi1b	99	65.294	ENSPMGG00000006021	gfi1b	99	65.294	Periophthalmus_magnuspinnatus
ENSPNAG00000021118	gfi1b	100	54.447	ENSPCIG00000019724	GFI1B	100	54.447	Phascolarctos_cinereus
ENSPNAG00000021118	gfi1b	100	69.822	ENSPFOG00000003460	gfi1b	100	69.822	Poecilia_formosa
ENSPNAG00000021118	gfi1b	100	69.186	ENSPLAG00000017181	GFI1B	100	69.186	Poecilia_latipinna
ENSPNAG00000021118	gfi1b	100	70.000	ENSPLAG00000021960	GFI1B	100	70.000	Poecilia_latipinna
ENSPNAG00000021118	gfi1b	100	69.706	ENSPMEG00000001556	GFI1B	100	69.706	Poecilia_mexicana
ENSPNAG00000021118	gfi1b	100	69.706	ENSPMEG00000019220	gfi1b	100	69.706	Poecilia_mexicana
ENSPNAG00000021118	gfi1b	100	69.412	ENSPREG00000021718	gfi1b	100	69.412	Poecilia_reticulata
ENSPNAG00000021118	gfi1b	100	67.560	ENSPNYG00000018422	gfi1b	100	67.560	Pundamilia_nyererei
ENSPNAG00000021118	gfi1b	100	50.543	ENSSHAG00000006462	GFI1B	100	50.543	Sarcophilus_harrisii
ENSPNAG00000021118	gfi1b	83	68.794	ENSSFOG00015011566	gfi1b	90	68.794	Scleropages_formosus
ENSPNAG00000021118	gfi1b	99	71.988	ENSSMAG00000015181	gfi1b	99	71.471	Scophthalmus_maximus
ENSPNAG00000021118	gfi1b	100	70.536	ENSSDUG00000011604	gfi1b	100	70.536	Seriola_dumerili
ENSPNAG00000021118	gfi1b	100	70.536	ENSSLDG00000013823	gfi1b	100	70.536	Seriola_lalandi_dorsalis
ENSPNAG00000021118	gfi1b	100	51.149	ENSSPUG00000016039	GFI1B	100	51.149	Sphenodon_punctatus
ENSPNAG00000021118	gfi1b	100	70.710	ENSSPAG00000022914	gfi1b	100	70.710	Stegastes_partitus
ENSPNAG00000021118	gfi1b	50	94.737	ENSTGUG00000005282	-	99	94.737	Taeniopygia_guttata
ENSPNAG00000021118	gfi1b	51	59.483	ENSTGUG00000015953	-	60	59.483	Taeniopygia_guttata
ENSPNAG00000021118	gfi1b	100	69.552	ENSTRUG00000004525	gfi1b	100	69.552	Takifugu_rubripes
ENSPNAG00000021118	gfi1b	100	68.657	ENSTNIG00000003834	gfi1b	100	68.657	Tetraodon_nigroviridis
ENSPNAG00000021118	gfi1b	100	44.315	ENSTBEG00000014459	GFI1B	100	44.315	Tupaia_belangeri
ENSPNAG00000021118	gfi1b	100	56.380	ENSXETG00000006263	gfi1b	100	56.105	Xenopus_tropicalis
ENSPNAG00000021118	gfi1b	100	70.588	ENSXMAG00000027589	gfi1b	100	70.588	Xiphophorus_maculatus