EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000021333 (Gene tree)
Gene ID: 108411053
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 6185 bases
Position: chrKV576022.1:303233-309417
Accession: 108411053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000015280	RRM_5	PF13893.6	9.8e-07	1	1
ENSPNAP00000015280	RRM_1	PF00076.22	2e-33	1	2
ENSPNAP00000015280	RRM_1	PF00076.22	2e-33	2	2
ENSPNAP00000015280	RRM_3	PF08777.11	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000037661	-	1782	XM_017682427	ENSPNAP00000015280	280 (aa)	XP_017537916	UPI0008149CD3

Gene Model

Click here to download ENSPNAG00000021333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000021333	srsf5a	60	43.429	ENSPNAG00000014601	srsf1b	66	45.143
ENSPNAG00000021333	srsf5a	65	72.826	ENSPNAG00000011262	srsf5b	84	72.656
ENSPNAG00000021333	srsf5a	97	49.470	ENSPNAG00000023844	srsf4	52	60.440
ENSPNAG00000021333	srsf5a	60	45.714	ENSPNAG00000022241	srsf1a	66	44.571
ENSPNAG00000021333	srsf5a	87	40.157	ENSPNAG00000003588	srsf9	68	40.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000021333	srsf5a	66	84.492	ENSACIG00000011892	srsf5a	96	82.734	Amphilophus_citrinellus
ENSPNAG00000021333	srsf5a	66	85.027	ENSATEG00000000198	srsf5a	94	65.091	Anabas_testudineus
ENSPNAG00000021333	srsf5a	66	78.495	ENSAPLG00000002469	-	70	77.957	Anas_platyrhynchos
ENSPNAG00000021333	srsf5a	66	77.174	ENSACAG00000029015	-	68	76.630	Anolis_carolinensis
ENSPNAG00000021333	srsf5a	100	79.004	ENSAMXG00000030476	srsf5a	67	95.676	Astyanax_mexicanus
ENSPNAG00000021333	srsf5a	66	78.804	ENSCPBG00000021518	-	70	78.804	Chrysemys_picta_bellii
ENSPNAG00000021333	srsf5a	66	52.683	ENSCSAVG00000011376	-	78	56.436	Ciona_savignyi
ENSPNAG00000021333	srsf5a	66	83.420	ENSCSEG00000008109	srsf5a	62	82.323	Cynoglossus_semilaevis
ENSPNAG00000021333	srsf5a	94	67.133	ENSCVAG00000016982	srsf5a	97	75.373	Cyprinodon_variegatus
ENSPNAG00000021333	srsf5a	92	87.160	ENSDARG00000029818	srsf5a	100	94.737	Danio_rerio
ENSPNAG00000021333	srsf5a	66	86.528	ENSELUG00000020439	srsf5a	62	89.119	Esox_lucius
ENSPNAG00000021333	srsf5a	66	79.348	ENSFALG00000005098	-	64	79.348	Ficedula_albicollis
ENSPNAG00000021333	srsf5a	65	74.500	ENSFHEG00000003955	srsf5a	97	72.414	Fundulus_heteroclitus
ENSPNAG00000021333	srsf5a	66	85.870	ENSGMOG00000000869	srsf5a	94	85.870	Gadus_morhua
ENSPNAG00000021333	srsf5a	66	78.804	ENSGALG00000033259	SRSF5A	63	78.261	Gallus_gallus
ENSPNAG00000021333	srsf5a	66	71.739	ENSGAFG00000018237	srsf5a	54	71.739	Gambusia_affinis
ENSPNAG00000021333	srsf5a	66	84.783	ENSGACG00000011761	srsf5a	70	78.238	Gasterosteus_aculeatus
ENSPNAG00000021333	srsf5a	66	78.804	ENSGAGG00000007312	-	70	78.804	Gopherus_agassizii
ENSPNAG00000021333	srsf5a	66	83.684	ENSHBUG00000014048	srsf5a	94	61.905	Haplochromis_burtoni
ENSPNAG00000021333	srsf5a	66	83.871	ENSHCOG00000017557	srsf5a	62	84.946	Hippocampus_comes
ENSPNAG00000021333	srsf5a	100	82.353	ENSIPUG00000003439	srsf5a	69	90.000	Ictalurus_punctatus
ENSPNAG00000021333	srsf5a	66	79.255	ENSKMAG00000014937	srsf5a	58	79.581	Kryptolebias_marmoratus
ENSPNAG00000021333	srsf5a	88	74.903	ENSLBEG00000017153	srsf5a	74	82.500	Labrus_bergylta
ENSPNAG00000021333	srsf5a	66	81.522	ENSLACG00000017874	-	70	83.152	Latimeria_chalumnae
ENSPNAG00000021333	srsf5a	66	89.189	ENSLOCG00000014075	srsf5a	61	89.730	Lepisosteus_oculatus
ENSPNAG00000021333	srsf5a	66	86.957	ENSMAMG00000000192	srsf5a	65	88.043	Mastacembelus_armatus
ENSPNAG00000021333	srsf5a	66	83.684	ENSMZEG00005010485	srsf5a	94	61.905	Maylandia_zebra
ENSPNAG00000021333	srsf5a	70	76.768	ENSMGAG00000011888	-	96	75.449	Meleagris_gallopavo
ENSPNAG00000021333	srsf5a	66	80.435	ENSMALG00000021194	srsf5a	90	61.719	Monopterus_albus
ENSPNAG00000021333	srsf5a	66	84.127	ENSNBRG00000000771	srsf5a	94	63.481	Neolamprologus_brichardi
ENSPNAG00000021333	srsf5a	66	84.127	ENSONIG00000019583	srsf5a	94	63.481	Oreochromis_niloticus
ENSPNAG00000021333	srsf5a	67	85.027	ENSORLG00000009268	srsf5a	67	85.870	Oryzias_latipes
ENSPNAG00000021333	srsf5a	67	85.027	ENSORLG00020003281	srsf5	67	85.870	Oryzias_latipes_hni
ENSPNAG00000021333	srsf5a	66	85.870	ENSORLG00015023075	srsf5	67	85.870	Oryzias_latipes_hsok
ENSPNAG00000021333	srsf5a	66	86.413	ENSOMEG00000000628	srsf5a	66	86.957	Oryzias_melastigma
ENSPNAG00000021333	srsf5a	66	89.247	ENSPKIG00000002054	srsf5a	68	89.785	Paramormyrops_kingsleyae
ENSPNAG00000021333	srsf5a	99	68.817	ENSPSIG00000008238	-	69	76.757	Pelodiscus_sinensis
ENSPNAG00000021333	srsf5a	66	80.978	ENSPMGG00000020125	srsf5a	55	81.183	Periophthalmus_magnuspinnatus
ENSPNAG00000021333	srsf5a	66	79.058	ENSPFOG00000022993	srsf5a	60	79.058	Poecilia_formosa
ENSPNAG00000021333	srsf5a	65	78.947	ENSPLAG00000005508	srsf5a	59	78.947	Poecilia_latipinna
ENSPNAG00000021333	srsf5a	66	79.058	ENSPMEG00000016339	srsf5a	60	79.058	Poecilia_mexicana
ENSPNAG00000021333	srsf5a	66	78.646	ENSPREG00000018091	srsf5a	61	78.646	Poecilia_reticulata
ENSPNAG00000021333	srsf5a	66	83.684	ENSPNYG00000021245	srsf5a	94	61.905	Pundamilia_nyererei
ENSPNAG00000021333	srsf5a	86	85.124	ENSSFOG00015008377	srsf5	66	91.398	Scleropages_formosus
ENSPNAG00000021333	srsf5a	66	86.957	ENSSDUG00000006103	srsf5a	93	64.945	Seriola_dumerili
ENSPNAG00000021333	srsf5a	66	74.457	ENSSPUG00000002052	-	68	73.913	Sphenodon_punctatus
ENSPNAG00000021333	srsf5a	66	79.891	ENSTGUG00000011492	-	68	79.348	Taeniopygia_guttata
ENSPNAG00000021333	srsf5a	66	81.771	ENSTRUG00000022908	srsf5a	65	81.218	Takifugu_rubripes
ENSPNAG00000021333	srsf5a	70	77.114	ENSXETG00000017937	srsf5a	72	80.851	Xenopus_tropicalis
ENSPNAG00000021333	srsf5a	66	78.610	ENSXCOG00000015338	srsf5a	61	78.610	Xiphophorus_couchianus
ENSPNAG00000021333	srsf5a	66	78.238	ENSXMAG00000012823	srsf5a	61	78.238	Xiphophorus_maculatus