EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000021427 (Gene tree)
Gene ID: 108440606
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 47694 bases
Position: chrKV575648.1:30641-78334
Accession: 108440606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000015282	La	PF05383.17	2.2e-21	1	1
ENSPNAP00000015331	La	PF05383.17	2.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000023493	-	6142	XM_017719556	ENSPNAP00000015331	1018 (aa)	XP_017575045	UPI0008144798
ENSPNAT00000023434	-	3072	-	ENSPNAP00000015282	1023 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000021427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000021427	larp1	94	51.775	ENSPNAG00000008823	larp1b	91	49.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000021427	larp1	85	72.383	ENSG00000155506	LARP1	90	80.606	Homo_sapiens
ENSPNAG00000021427	larp1	88	87.727	ENSAPOG00000020685	larp1	99	87.727	Acanthochromis_polyacanthus
ENSPNAG00000021427	larp1	85	72.494	ENSAMEG00000016673	LARP1	99	70.231	Ailuropoda_melanoleuca
ENSPNAG00000021427	larp1	99	71.075	ENSACIG00000012994	larp1	99	70.755	Amphilophus_citrinellus
ENSPNAG00000021427	larp1	79	82.024	ENSAOCG00000007792	larp1	99	80.000	Amphiprion_ocellaris
ENSPNAG00000021427	larp1	99	78.199	ENSAPEG00000022246	larp1	99	76.588	Amphiprion_percula
ENSPNAG00000021427	larp1	92	79.162	ENSATEG00000013523	larp1	98	73.913	Anabas_testudineus
ENSPNAG00000021427	larp1	84	75.452	ENSAPLG00000007559	LARP1	99	73.529	Anas_platyrhynchos
ENSPNAG00000021427	larp1	89	71.324	ENSACAG00000004071	LARP1	97	72.644	Anolis_carolinensis
ENSPNAG00000021427	larp1	85	72.284	ENSANAG00000029949	LARP1	99	67.398	Aotus_nancymaae
ENSPNAG00000021427	larp1	99	75.929	ENSACLG00000015256	larp1	98	77.583	Astatotilapia_calliptera
ENSPNAG00000021427	larp1	100	88.580	ENSAMXG00000000859	larp1	100	87.524	Astyanax_mexicanus
ENSPNAG00000021427	larp1	88	72.198	ENSBTAG00000008443	LARP1	99	65.114	Bos_taurus
ENSPNAG00000021427	larp1	96	66.476	ENSCJAG00000004454	LARP1	99	65.055	Callithrix_jacchus
ENSPNAG00000021427	larp1	85	72.687	ENSCAFG00000017639	LARP1	99	70.304	Canis_familiaris
ENSPNAG00000021427	larp1	79	74.070	ENSCAFG00020023860	LARP1	99	71.316	Canis_lupus_dingo
ENSPNAG00000021427	larp1	97	66.189	ENSCHIG00000014414	LARP1	99	65.335	Capra_hircus
ENSPNAG00000021427	larp1	88	70.450	ENSTSYG00000013732	LARP1	99	68.308	Carlito_syrichta
ENSPNAG00000021427	larp1	79	71.789	ENSCAPG00000013865	LARP1	85	71.789	Cavia_aperea
ENSPNAG00000021427	larp1	87	70.815	ENSCPOG00000003377	LARP1	99	70.316	Cavia_porcellus
ENSPNAG00000021427	larp1	88	71.552	ENSCCAG00000025201	LARP1	99	65.087	Cebus_capucinus
ENSPNAG00000021427	larp1	96	64.535	ENSCATG00000030675	LARP1	93	70.378	Cercocebus_atys
ENSPNAG00000021427	larp1	88	70.231	ENSCLAG00000012755	LARP1	99	68.344	Chinchilla_lanigera
ENSPNAG00000021427	larp1	81	70.907	ENSCSAG00000010800	LARP1	99	69.565	Chlorocebus_sabaeus
ENSPNAG00000021427	larp1	82	68.429	ENSCHOG00000012716	LARP1	87	68.429	Choloepus_hoffmanni
ENSPNAG00000021427	larp1	97	70.983	ENSCPBG00000002173	LARP1	93	72.845	Chrysemys_picta_bellii
ENSPNAG00000021427	larp1	87	71.521	ENSCANG00000037418	LARP1	93	70.483	Colobus_angolensis_palliatus
ENSPNAG00000021427	larp1	99	65.634	ENSCGRG00001016913	Larp1	99	65.005	Cricetulus_griseus_chok1gshd
ENSPNAG00000021427	larp1	85	68.233	ENSCGRG00000009916	Larp1	99	67.912	Cricetulus_griseus_crigri
ENSPNAG00000021427	larp1	98	77.947	ENSCSEG00000016431	larp1	99	75.820	Cynoglossus_semilaevis
ENSPNAG00000021427	larp1	99	76.420	ENSCVAG00000022687	larp1	97	76.727	Cyprinodon_variegatus
ENSPNAG00000021427	larp1	100	72.718	ENSDARG00000101722	larp1	100	71.165	Danio_rerio
ENSPNAG00000021427	larp1	99	64.253	ENSDNOG00000012073	LARP1	99	63.993	Dasypus_novemcinctus
ENSPNAG00000021427	larp1	89	68.051	ENSDORG00000002897	Larp1	98	67.979	Dipodomys_ordii
ENSPNAG00000021427	larp1	84	72.348	ENSETEG00000020251	LARP1	100	72.676	Echinops_telfairi
ENSPNAG00000021427	larp1	89	70.693	ENSEASG00005001070	LARP1	96	75.348	Equus_asinus_asinus
ENSPNAG00000021427	larp1	89	70.693	ENSECAG00000017002	LARP1	75	74.965	Equus_caballus
ENSPNAG00000021427	larp1	84	67.857	ENSEEUG00000001065	LARP1	99	66.917	Erinaceus_europaeus
ENSPNAG00000021427	larp1	100	76.596	ENSELUG00000019403	larp1	100	74.746	Esox_lucius
ENSPNAG00000021427	larp1	88	71.828	ENSFCAG00000000592	LARP1	99	64.701	Felis_catus
ENSPNAG00000021427	larp1	78	73.892	ENSFALG00000008335	LARP1	98	73.645	Ficedula_albicollis
ENSPNAG00000021427	larp1	87	70.999	ENSFDAG00000021125	LARP1	99	70.242	Fukomys_damarensis
ENSPNAG00000021427	larp1	63	69.896	ENSFHEG00000020307	larp1	92	75.375	Fundulus_heteroclitus
ENSPNAG00000021427	larp1	99	70.182	ENSGALG00000040109	LARP1	96	72.689	Gallus_gallus
ENSPNAG00000021427	larp1	99	69.614	ENSGAGG00000025113	LARP1	98	73.151	Gopherus_agassizii
ENSPNAG00000021427	larp1	85	72.383	ENSGGOG00000006048	LARP1	93	70.378	Gorilla_gorilla
ENSPNAG00000021427	larp1	99	76.471	ENSHBUG00000020762	larp1	98	78.089	Haplochromis_burtoni
ENSPNAG00000021427	larp1	92	68.044	ENSHGLG00000006267	LARP1	99	64.377	Heterocephalus_glaber_female
ENSPNAG00000021427	larp1	89	60.888	ENSHGLG00100003395	-	89	59.209	Heterocephalus_glaber_male
ENSPNAG00000021427	larp1	88	69.895	ENSHGLG00100014230	-	99	69.968	Heterocephalus_glaber_male
ENSPNAG00000021427	larp1	92	85.851	ENSHCOG00000010786	larp1	99	85.851	Hippocampus_comes
ENSPNAG00000021427	larp1	97	77.296	ENSIPUG00000019105	Larp1	98	77.094	Ictalurus_punctatus
ENSPNAG00000021427	larp1	86	70.243	ENSSTOG00000005678	LARP1	99	68.657	Ictidomys_tridecemlineatus
ENSPNAG00000021427	larp1	91	65.977	ENSJJAG00000016950	Larp1	99	62.629	Jaculus_jaculus
ENSPNAG00000021427	larp1	99	77.873	ENSKMAG00000018468	larp1	98	78.333	Kryptolebias_marmoratus
ENSPNAG00000021427	larp1	99	74.766	ENSLBEG00000027172	larp1	99	73.041	Labrus_bergylta
ENSPNAG00000021427	larp1	95	81.417	ENSLOCG00000012457	larp1	99	79.774	Lepisosteus_oculatus
ENSPNAG00000021427	larp1	99	64.711	ENSLAFG00000008991	LARP1	98	65.327	Loxodonta_africana
ENSPNAG00000021427	larp1	87	71.305	ENSMFAG00000031651	LARP1	93	70.273	Macaca_fascicularis
ENSPNAG00000021427	larp1	87	69.518	ENSMMUG00000009411	LARP1	98	72.018	Macaca_mulatta
ENSPNAG00000021427	larp1	83	71.982	ENSMNEG00000039294	LARP1	99	71.429	Macaca_nemestrina
ENSPNAG00000021427	larp1	87	71.521	ENSMLEG00000035142	LARP1	93	70.483	Mandrillus_leucophaeus
ENSPNAG00000021427	larp1	99	76.723	ENSMAMG00000021788	larp1	98	75.256	Mastacembelus_armatus
ENSPNAG00000021427	larp1	99	75.929	ENSMZEG00005009345	larp1	98	77.583	Maylandia_zebra
ENSPNAG00000021427	larp1	88	72.336	ENSMGAG00000005696	LARP1	99	72.336	Meleagris_gallopavo
ENSPNAG00000021427	larp1	99	65.258	ENSMAUG00000001385	Larp1	99	65.005	Mesocricetus_auratus
ENSPNAG00000021427	larp1	85	72.646	ENSMICG00000000837	LARP1	96	75.559	Microcebus_murinus
ENSPNAG00000021427	larp1	99	65.446	ENSMOCG00000008920	Larp1	99	64.940	Microtus_ochrogaster
ENSPNAG00000021427	larp1	99	56.870	ENSMMOG00000013364	larp1	97	59.922	Mola_mola
ENSPNAG00000021427	larp1	88	71.186	ENSMODG00000008663	LARP1	98	69.280	Monodelphis_domestica
ENSPNAG00000021427	larp1	99	75.833	ENSMALG00000017180	larp1	95	78.798	Monopterus_albus
ENSPNAG00000021427	larp1	99	65.540	MGP_CAROLIEiJ_G0016383	Larp1	99	65.125	Mus_caroli
ENSPNAG00000021427	larp1	99	65.634	ENSMUSG00000037331	Larp1	99	65.217	Mus_musculus
ENSPNAG00000021427	larp1	99	65.385	MGP_PahariEiJ_G0017518	Larp1	99	65.250	Mus_pahari
ENSPNAG00000021427	larp1	99	65.634	MGP_SPRETEiJ_G0017225	Larp1	99	65.217	Mus_spretus
ENSPNAG00000021427	larp1	75	68.979	ENSMPUG00000013564	LARP1	99	63.146	Mustela_putorius_furo
ENSPNAG00000021427	larp1	89	67.015	ENSMLUG00000002608	LARP1	99	67.223	Myotis_lucifugus
ENSPNAG00000021427	larp1	88	68.550	ENSNGAG00000001098	Larp1	98	68.663	Nannospalax_galili
ENSPNAG00000021427	larp1	89	83.297	ENSNBRG00000008963	larp1	95	81.425	Neolamprologus_brichardi
ENSPNAG00000021427	larp1	85	70.792	ENSNLEG00000016588	LARP1	99	67.910	Nomascus_leucogenys
ENSPNAG00000021427	larp1	88	67.134	ENSMEUG00000002957	LARP1	99	67.134	Notamacropus_eugenii
ENSPNAG00000021427	larp1	87	70.366	ENSOPRG00000013014	LARP1	99	69.937	Ochotona_princeps
ENSPNAG00000021427	larp1	88	70.308	ENSODEG00000010824	LARP1	99	70.304	Octodon_degus
ENSPNAG00000021427	larp1	99	74.794	ENSONIG00000017308	larp1	99	73.708	Oreochromis_niloticus
ENSPNAG00000021427	larp1	89	71.789	ENSOANG00000005096	LARP1	97	72.632	Ornithorhynchus_anatinus
ENSPNAG00000021427	larp1	92	69.473	ENSOCUG00000013066	LARP1	99	65.709	Oryctolagus_cuniculus
ENSPNAG00000021427	larp1	99	74.695	ENSORLG00000000824	larp1	98	78.580	Oryzias_latipes
ENSPNAG00000021427	larp1	99	75.118	ENSORLG00020022241	larp1	99	73.983	Oryzias_latipes_hni
ENSPNAG00000021427	larp1	99	74.166	ENSORLG00015007538	larp1	99	73.749	Oryzias_latipes_hsok
ENSPNAG00000021427	larp1	98	75.508	ENSOMEG00000003134	larp1	97	75.315	Oryzias_melastigma
ENSPNAG00000021427	larp1	88	70.105	ENSOGAG00000016750	LARP1	99	70.105	Otolemur_garnettii
ENSPNAG00000021427	larp1	85	70.982	ENSOARG00000009893	LARP1	99	68.211	Ovis_aries
ENSPNAG00000021427	larp1	85	72.383	ENSPPAG00000042993	LARP1	93	70.378	Pan_paniscus
ENSPNAG00000021427	larp1	85	71.032	ENSPPRG00000009780	LARP1	93	68.029	Panthera_pardus
ENSPNAG00000021427	larp1	85	71.269	ENSPTIG00000007013	LARP1	93	68.553	Panthera_tigris_altaica
ENSPNAG00000021427	larp1	96	64.632	ENSPTRG00000017447	LARP1	93	70.273	Pan_troglodytes
ENSPNAG00000021427	larp1	96	64.729	ENSPANG00000008080	LARP1	93	70.378	Papio_anubis
ENSPNAG00000021427	larp1	100	78.665	ENSPKIG00000010096	larp1	100	77.505	Paramormyrops_kingsleyae
ENSPNAG00000021427	larp1	97	71.485	ENSPKIG00000017153	-	99	70.612	Paramormyrops_kingsleyae
ENSPNAG00000021427	larp1	97	76.429	ENSPMGG00000011599	larp1	99	76.028	Periophthalmus_magnuspinnatus
ENSPNAG00000021427	larp1	89	67.910	ENSPEMG00000022523	Larp1	99	67.910	Peromyscus_maniculatus_bairdii
ENSPNAG00000021427	larp1	90	72.152	ENSPCIG00000019242	LARP1	88	66.058	Phascolarctos_cinereus
ENSPNAG00000021427	larp1	97	74.057	ENSPFOG00000005836	larp1	98	72.181	Poecilia_formosa
ENSPNAG00000021427	larp1	97	75.483	ENSPLAG00000008936	larp1	98	73.819	Poecilia_latipinna
ENSPNAG00000021427	larp1	97	74.621	ENSPMEG00000013656	larp1	98	72.181	Poecilia_mexicana
ENSPNAG00000021427	larp1	86	78.717	ENSPREG00000005726	larp1	97	76.385	Poecilia_reticulata
ENSPNAG00000021427	larp1	87	69.014	ENSPCAG00000006407	LARP1	96	69.737	Procavia_capensis
ENSPNAG00000021427	larp1	85	66.444	ENSPCOG00000016949	LARP1	99	65.651	Propithecus_coquereli
ENSPNAG00000021427	larp1	89	71.039	ENSPVAG00000002262	LARP1	98	65.530	Pteropus_vampyrus
ENSPNAG00000021427	larp1	99	76.208	ENSPNYG00000007938	larp1	98	77.686	Pundamilia_nyererei
ENSPNAG00000021427	larp1	89	68.371	ENSRNOG00000031544	Larp1	98	68.371	Rattus_norvegicus
ENSPNAG00000021427	larp1	90	69.479	ENSRBIG00000038005	LARP1	96	68.528	Rhinopithecus_bieti
ENSPNAG00000021427	larp1	90	69.479	ENSRROG00000034073	LARP1	99	71.429	Rhinopithecus_roxellana
ENSPNAG00000021427	larp1	88	70.181	ENSSBOG00000019816	LARP1	99	68.337	Saimiri_boliviensis_boliviensis
ENSPNAG00000021427	larp1	88	72.222	ENSSHAG00000011115	LARP1	99	70.299	Sarcophilus_harrisii
ENSPNAG00000021427	larp1	100	74.952	ENSSFOG00015018058	-	100	73.734	Scleropages_formosus
ENSPNAG00000021427	larp1	90	79.979	ENSSFOG00015020304	larp1	96	78.265	Scleropages_formosus
ENSPNAG00000021427	larp1	88	82.444	ENSSMAG00000007468	larp1	98	76.754	Scophthalmus_maximus
ENSPNAG00000021427	larp1	99	75.318	ENSSDUG00000000268	larp1	97	76.977	Seriola_dumerili
ENSPNAG00000021427	larp1	83	79.186	ENSSLDG00000016505	larp1	97	76.860	Seriola_lalandi_dorsalis
ENSPNAG00000021427	larp1	52	87.330	ENSSARG00000013907	-	80	87.330	Sorex_araneus
ENSPNAG00000021427	larp1	92	73.958	ENSSPUG00000012179	-	91	70.489	Sphenodon_punctatus
ENSPNAG00000021427	larp1	99	77.404	ENSSPAG00000003910	larp1	99	75.978	Stegastes_partitus
ENSPNAG00000021427	larp1	89	70.873	ENSSSCG00000017069	LARP1	99	70.866	Sus_scrofa
ENSPNAG00000021427	larp1	85	73.904	ENSTGUG00000000704	LARP1	99	72.149	Taeniopygia_guttata
ENSPNAG00000021427	larp1	99	75.497	ENSTRUG00000009470	larp1	99	73.888	Takifugu_rubripes
ENSPNAG00000021427	larp1	84	70.370	ENSTBEG00000003381	LARP1	99	70.688	Tupaia_belangeri
ENSPNAG00000021427	larp1	84	72.480	ENSTTRG00000015934	LARP1	99	70.032	Tursiops_truncatus
ENSPNAG00000021427	larp1	91	70.239	ENSUAMG00000019334	LARP1	99	64.759	Ursus_americanus
ENSPNAG00000021427	larp1	84	72.037	ENSUMAG00000002934	LARP1	98	71.332	Ursus_maritimus
ENSPNAG00000021427	larp1	79	74.070	ENSVVUG00000004644	LARP1	99	71.316	Vulpes_vulpes
ENSPNAG00000021427	larp1	92	73.618	ENSXETG00000008413	larp1	99	70.481	Xenopus_tropicalis
ENSPNAG00000021427	larp1	86	80.165	ENSXCOG00000004022	larp1	97	80.221	Xiphophorus_couchianus
ENSPNAG00000021427	larp1	97	74.032	ENSXMAG00000018780	larp1	98	72.063	Xiphophorus_maculatus