EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000021490 (Gene tree)
Gene ID: 108427931
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 10012 bases
Position: chrKV575288.1:2422914-2432925
Accession: 108427931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000015466	MRP-S27	PF10037.9	7.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000037739	-	2124	XM_017698524	ENSPNAP00000015466	384 (aa)	XP_017554013	UPI0008144862

Gene Model

Click here to download ENSPNAG00000021490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000021490	ptcd2	97	47.215	ENSG00000049883	PTCD2	100	43.781	Homo_sapiens
ENSPNAG00000021490	ptcd2	100	61.719	ENSAPOG00000020682	ptcd2	100	61.719	Acanthochromis_polyacanthus
ENSPNAG00000021490	ptcd2	95	48.641	ENSAMEG00000007194	PTCD2	94	48.370	Ailuropoda_melanoleuca
ENSPNAG00000021490	ptcd2	90	58.405	ENSACIG00000002053	ptcd2	100	57.550	Amphilophus_citrinellus
ENSPNAG00000021490	ptcd2	100	63.802	ENSAOCG00000006616	ptcd2	98	63.802	Amphiprion_ocellaris
ENSPNAG00000021490	ptcd2	100	63.377	ENSAPEG00000022926	ptcd2	98	63.281	Amphiprion_percula
ENSPNAG00000021490	ptcd2	94	51.648	ENSACAG00000009747	PTCD2	92	51.648	Anolis_carolinensis
ENSPNAG00000021490	ptcd2	94	47.790	ENSANAG00000029353	PTCD2	93	47.514	Aotus_nancymaae
ENSPNAG00000021490	ptcd2	100	63.021	ENSACLG00000027742	ptcd2	98	63.021	Astatotilapia_calliptera
ENSPNAG00000021490	ptcd2	100	62.338	ENSAMXG00000029404	ptcd2	100	62.338	Astyanax_mexicanus
ENSPNAG00000021490	ptcd2	97	47.340	ENSBTAG00000014675	PTCD2	97	47.074	Bos_taurus
ENSPNAG00000021490	ptcd2	94	47.790	ENSCJAG00000016364	PTCD2	93	47.790	Callithrix_jacchus
ENSPNAG00000021490	ptcd2	95	50.543	ENSCAFG00000007982	PTCD2	86	50.272	Canis_familiaris
ENSPNAG00000021490	ptcd2	91	51.003	ENSCAFG00020019147	PTCD2	97	50.716	Canis_lupus_dingo
ENSPNAG00000021490	ptcd2	94	48.343	ENSCHIG00000017118	PTCD2	93	48.066	Capra_hircus
ENSPNAG00000021490	ptcd2	93	45.810	ENSCPOG00000040168	PTCD2	93	45.251	Cavia_porcellus
ENSPNAG00000021490	ptcd2	77	47.492	ENSCCAG00000021996	-	92	47.492	Cebus_capucinus
ENSPNAG00000021490	ptcd2	94	47.790	ENSCCAG00000029389	-	93	47.790	Cebus_capucinus
ENSPNAG00000021490	ptcd2	91	49.714	ENSCATG00000019069	PTCD2	91	49.714	Cercocebus_atys
ENSPNAG00000021490	ptcd2	93	46.089	ENSCLAG00000000072	PTCD2	93	46.089	Chinchilla_lanigera
ENSPNAG00000021490	ptcd2	91	50.286	ENSCSAG00000015623	PTCD2	98	48.413	Chlorocebus_sabaeus
ENSPNAG00000021490	ptcd2	67	53.529	ENSCHOG00000010634	PTCD2	74	53.529	Choloepus_hoffmanni
ENSPNAG00000021490	ptcd2	96	48.780	ENSCPBG00000000216	PTCD2	94	48.780	Chrysemys_picta_bellii
ENSPNAG00000021490	ptcd2	98	48.942	ENSCANG00000035636	PTCD2	97	48.677	Colobus_angolensis_palliatus
ENSPNAG00000021490	ptcd2	93	48.603	ENSCGRG00001015289	Ptcd2	78	48.603	Cricetulus_griseus_chok1gshd
ENSPNAG00000021490	ptcd2	93	48.603	ENSCGRG00000006193	Ptcd2	78	48.603	Cricetulus_griseus_crigri
ENSPNAG00000021490	ptcd2	100	61.757	ENSCVAG00000001285	ptcd2	98	61.757	Cyprinodon_variegatus
ENSPNAG00000021490	ptcd2	100	61.140	ENSDARG00000035391	ptcd2	100	61.140	Danio_rerio
ENSPNAG00000021490	ptcd2	94	47.790	ENSDNOG00000008719	PTCD2	94	47.514	Dasypus_novemcinctus
ENSPNAG00000021490	ptcd2	99	46.512	ENSDORG00000004921	Ptcd2	99	46.512	Dipodomys_ordii
ENSPNAG00000021490	ptcd2	95	44.624	ENSETEG00000016542	PTCD2	89	45.299	Echinops_telfairi
ENSPNAG00000021490	ptcd2	94	49.171	ENSEASG00005018038	PTCD2	93	48.895	Equus_asinus_asinus
ENSPNAG00000021490	ptcd2	94	49.171	ENSECAG00000007022	PTCD2	92	48.895	Equus_caballus
ENSPNAG00000021490	ptcd2	95	47.090	ENSEEUG00000014031	PTCD2	97	46.825	Erinaceus_europaeus
ENSPNAG00000021490	ptcd2	100	62.953	ENSELUG00000003584	ptcd2	100	62.953	Esox_lucius
ENSPNAG00000021490	ptcd2	82	50.000	ENSFCAG00000045432	PTCD2	73	49.684	Felis_catus
ENSPNAG00000021490	ptcd2	86	44.848	ENSFALG00000010299	PTCD2	99	44.848	Ficedula_albicollis
ENSPNAG00000021490	ptcd2	91	47.429	ENSFDAG00000018461	PTCD2	91	47.429	Fukomys_damarensis
ENSPNAG00000021490	ptcd2	99	57.513	ENSGMOG00000003637	ptcd2	99	57.513	Gadus_morhua
ENSPNAG00000021490	ptcd2	93	44.258	ENSGALG00000038260	PTCD2	99	43.307	Gallus_gallus
ENSPNAG00000021490	ptcd2	94	53.315	ENSGAGG00000021952	PTCD2	92	53.315	Gopherus_agassizii
ENSPNAG00000021490	ptcd2	97	47.215	ENSGGOG00000010695	PTCD2	96	47.215	Gorilla_gorilla
ENSPNAG00000021490	ptcd2	100	62.760	ENSHBUG00000009191	ptcd2	98	62.760	Haplochromis_burtoni
ENSPNAG00000021490	ptcd2	93	47.207	ENSHGLG00000001234	PTCD2	93	47.207	Heterocephalus_glaber_female
ENSPNAG00000021490	ptcd2	93	47.207	ENSHGLG00100015419	PTCD2	93	47.207	Heterocephalus_glaber_male
ENSPNAG00000021490	ptcd2	100	59.536	ENSHCOG00000001703	ptcd2	100	59.794	Hippocampus_comes
ENSPNAG00000021490	ptcd2	99	69.634	ENSIPUG00000006080	ptcd2	99	69.634	Ictalurus_punctatus
ENSPNAG00000021490	ptcd2	94	48.066	ENSSTOG00000006596	PTCD2	97	46.809	Ictidomys_tridecemlineatus
ENSPNAG00000021490	ptcd2	93	48.324	ENSJJAG00000024388	Ptcd2	93	48.324	Jaculus_jaculus
ENSPNAG00000021490	ptcd2	96	53.804	ENSKMAG00000009329	ptcd2	96	53.804	Kryptolebias_marmoratus
ENSPNAG00000021490	ptcd2	100	59.896	ENSLBEG00000024871	ptcd2	98	59.896	Labrus_bergylta
ENSPNAG00000021490	ptcd2	100	57.623	ENSLOCG00000011122	ptcd2	100	57.623	Lepisosteus_oculatus
ENSPNAG00000021490	ptcd2	71	52.920	ENSLAFG00000004115	PTCD2	92	51.748	Loxodonta_africana
ENSPNAG00000021490	ptcd2	98	47.884	ENSMFAG00000031516	PTCD2	97	47.884	Macaca_fascicularis
ENSPNAG00000021490	ptcd2	95	48.138	ENSMNEG00000007537	PTCD2	97	48.138	Macaca_nemestrina
ENSPNAG00000021490	ptcd2	98	47.619	ENSMLEG00000031093	PTCD2	97	47.619	Mandrillus_leucophaeus
ENSPNAG00000021490	ptcd2	100	60.938	ENSMAMG00000018529	ptcd2	100	60.938	Mastacembelus_armatus
ENSPNAG00000021490	ptcd2	100	63.021	ENSMZEG00005003625	ptcd2	98	63.021	Maylandia_zebra
ENSPNAG00000021490	ptcd2	91	44.857	ENSMGAG00000005033	PTCD2	99	44.857	Meleagris_gallopavo
ENSPNAG00000021490	ptcd2	94	45.304	ENSMICG00000004535	PTCD2	93	45.028	Microcebus_murinus
ENSPNAG00000021490	ptcd2	94	48.077	ENSMOCG00000019985	Ptcd2	95	47.802	Microtus_ochrogaster
ENSPNAG00000021490	ptcd2	98	49.606	ENSMODG00000001695	PTCD2	98	49.606	Monodelphis_domestica
ENSPNAG00000021490	ptcd2	100	63.021	ENSMALG00000022372	ptcd2	100	63.021	Monopterus_albus
ENSPNAG00000021490	ptcd2	93	48.603	MGP_CAROLIEiJ_G0018829	Ptcd2	93	48.324	Mus_caroli
ENSPNAG00000021490	ptcd2	93	47.765	ENSMUSG00000021650	Ptcd2	93	47.486	Mus_musculus
ENSPNAG00000021490	ptcd2	93	49.162	MGP_PahariEiJ_G0015904	Ptcd2	93	48.883	Mus_pahari
ENSPNAG00000021490	ptcd2	93	48.603	MGP_SPRETEiJ_G0019711	Ptcd2	93	48.324	Mus_spretus
ENSPNAG00000021490	ptcd2	94	50.000	ENSMPUG00000014401	PTCD2	94	49.724	Mustela_putorius_furo
ENSPNAG00000021490	ptcd2	91	48.857	ENSMLUG00000007374	PTCD2	98	46.475	Myotis_lucifugus
ENSPNAG00000021490	ptcd2	95	46.486	ENSNGAG00000005027	Ptcd2	95	46.486	Nannospalax_galili
ENSPNAG00000021490	ptcd2	100	62.760	ENSNBRG00000008174	ptcd2	100	62.760	Neolamprologus_brichardi
ENSPNAG00000021490	ptcd2	86	61.145	ENSNBRG00000000092	-	100	61.145	Neolamprologus_brichardi
ENSPNAG00000021490	ptcd2	97	47.215	ENSNLEG00000004516	PTCD2	96	47.215	Nomascus_leucogenys
ENSPNAG00000021490	ptcd2	93	48.603	ENSOPRG00000007290	PTCD2	91	47.765	Ochotona_princeps
ENSPNAG00000021490	ptcd2	91	49.714	ENSODEG00000016417	PTCD2	91	49.429	Octodon_degus
ENSPNAG00000021490	ptcd2	85	63.303	ENSONIG00000011269	ptcd2	94	64.062	Oreochromis_niloticus
ENSPNAG00000021490	ptcd2	95	47.283	ENSOCUG00000007970	PTCD2	98	46.419	Oryctolagus_cuniculus
ENSPNAG00000021490	ptcd2	95	63.014	ENSORLG00000003851	ptcd2	92	63.014	Oryzias_latipes
ENSPNAG00000021490	ptcd2	95	61.918	ENSORLG00020009823	ptcd2	94	61.918	Oryzias_latipes_hni
ENSPNAG00000021490	ptcd2	91	62.069	ENSORLG00015016777	ptcd2	99	62.069	Oryzias_latipes_hsok
ENSPNAG00000021490	ptcd2	99	58.421	ENSOMEG00000012396	ptcd2	91	58.421	Oryzias_melastigma
ENSPNAG00000021490	ptcd2	94	46.409	ENSOGAG00000008390	PTCD2	93	46.133	Otolemur_garnettii
ENSPNAG00000021490	ptcd2	94	48.619	ENSOARG00000005087	PTCD2	92	48.343	Ovis_aries
ENSPNAG00000021490	ptcd2	97	47.215	ENSPPAG00000028480	PTCD2	96	47.215	Pan_paniscus
ENSPNAG00000021490	ptcd2	97	47.215	ENSPTRG00000016968	PTCD2	96	47.215	Pan_troglodytes
ENSPNAG00000021490	ptcd2	90	49.713	ENSPANG00000006611	PTCD2	89	49.713	Papio_anubis
ENSPNAG00000021490	ptcd2	100	56.959	ENSPKIG00000019896	ptcd2	100	56.959	Paramormyrops_kingsleyae
ENSPNAG00000021490	ptcd2	82	52.848	ENSPSIG00000014559	PTCD2	90	55.326	Pelodiscus_sinensis
ENSPNAG00000021490	ptcd2	94	49.176	ENSPEMG00000000884	Ptcd2	95	49.176	Peromyscus_maniculatus_bairdii
ENSPNAG00000021490	ptcd2	93	49.441	ENSPCIG00000029047	PTCD2	92	48.739	Phascolarctos_cinereus
ENSPNAG00000021490	ptcd2	93	61.003	ENSPLAG00000010456	ptcd2	100	60.104	Poecilia_latipinna
ENSPNAG00000021490	ptcd2	100	60.881	ENSPREG00000021797	ptcd2	98	60.881	Poecilia_reticulata
ENSPNAG00000021490	ptcd2	97	41.645	ENSPPYG00000015543	PTCD2	96	41.645	Pongo_abelii
ENSPNAG00000021490	ptcd2	73	42.705	ENSPCAG00000006806	PTCD2	89	42.705	Procavia_capensis
ENSPNAG00000021490	ptcd2	97	46.277	ENSPVAG00000010935	PTCD2	96	46.277	Pteropus_vampyrus
ENSPNAG00000021490	ptcd2	100	62.760	ENSPNYG00000003122	ptcd2	98	62.760	Pundamilia_nyererei
ENSPNAG00000021490	ptcd2	95	47.154	ENSRNOG00000028403	Ptcd2	96	47.154	Rattus_norvegicus
ENSPNAG00000021490	ptcd2	99	45.078	ENSRBIG00000032929	PTCD2	98	44.819	Rhinopithecus_bieti
ENSPNAG00000021490	ptcd2	99	48.964	ENSRROG00000000080	PTCD2	99	48.705	Rhinopithecus_roxellana
ENSPNAG00000021490	ptcd2	94	47.238	ENSSBOG00000018911	PTCD2	94	47.238	Saimiri_boliviensis_boliviensis
ENSPNAG00000021490	ptcd2	97	46.702	ENSSHAG00000003833	PTCD2	97	46.174	Sarcophilus_harrisii
ENSPNAG00000021490	ptcd2	98	54.354	ENSSFOG00015015415	ptcd2	98	54.354	Scleropages_formosus
ENSPNAG00000021490	ptcd2	100	56.298	ENSSMAG00000010350	ptcd2	100	56.298	Scophthalmus_maximus
ENSPNAG00000021490	ptcd2	100	64.062	ENSSDUG00000008142	ptcd2	95	64.062	Seriola_dumerili
ENSPNAG00000021490	ptcd2	100	64.323	ENSSLDG00000015284	ptcd2	100	64.323	Seriola_lalandi_dorsalis
ENSPNAG00000021490	ptcd2	77	41.611	ENSSARG00000004983	PTCD2	95	41.611	Sorex_araneus
ENSPNAG00000021490	ptcd2	93	45.938	ENSSPUG00000000176	PTCD2	89	45.938	Sphenodon_punctatus
ENSPNAG00000021490	ptcd2	100	58.333	ENSSPAG00000008591	ptcd2	98	58.333	Stegastes_partitus
ENSPNAG00000021490	ptcd2	95	48.774	ENSSSCG00000016975	PTCD2	86	48.501	Sus_scrofa
ENSPNAG00000021490	ptcd2	85	46.505	ENSTGUG00000005705	PTCD2	95	46.505	Taeniopygia_guttata
ENSPNAG00000021490	ptcd2	94	46.685	ENSTBEG00000016559	PTCD2	93	46.685	Tupaia_belangeri
ENSPNAG00000021490	ptcd2	94	50.000	ENSTTRG00000011851	PTCD2	92	49.724	Tursiops_truncatus
ENSPNAG00000021490	ptcd2	95	48.641	ENSUAMG00000007583	PTCD2	85	48.370	Ursus_americanus
ENSPNAG00000021490	ptcd2	94	47.849	ENSUMAG00000007666	PTCD2	96	47.581	Ursus_maritimus
ENSPNAG00000021490	ptcd2	94	46.685	ENSVPAG00000009597	PTCD2	92	46.409	Vicugna_pacos
ENSPNAG00000021490	ptcd2	91	50.857	ENSVVUG00000007299	-	95	49.728	Vulpes_vulpes
ENSPNAG00000021490	ptcd2	100	48.579	ENSXETG00000031652	PTCD2	100	47.927	Xenopus_tropicalis
ENSPNAG00000021490	ptcd2	93	60.556	ENSXMAG00000005940	ptcd2	91	59.690	Xiphophorus_maculatus