EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000021630 (Gene tree)
Gene ID: 108433399
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 5536 bases
Position: chrKV575420.1:1005605-1011140
Accession: 108433399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000015524	RRM_1	PF00076.22	1.9e-34	1	2
ENSPNAP00000015524	RRM_1	PF00076.22	1.9e-34	2	2
ENSPNAP00000015547	RRM_1	PF00076.22	2.7e-34	1	2
ENSPNAP00000015547	RRM_1	PF00076.22	2.7e-34	2	2
ENSPNAP00000033151	RRM_1	PF00076.22	2.7e-34	1	2
ENSPNAP00000033151	RRM_1	PF00076.22	2.7e-34	2	2
ENSPNAP00000015524	HnRNPA1	PF11627.8	6.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000023770	-	1182	-	ENSPNAP00000015547	368 (aa)	-	UPI0008146311
ENSPNAT00000023766	-	1173	XM_017707935	ENSPNAP00000033151	368 (aa)	XP_017563424	UPI0008146311
ENSPNAT00000023783	-	990	-	ENSPNAP00000015524	329 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000021630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000021630	-	56	61.017	ENSPNAG00000023333	HNRNPA0	65	59.788
ENSPNAG00000021630	-	70	33.588	ENSPNAG00000000458	hnrnpaba	62	38.095
ENSPNAG00000021630	-	97	35.955	ENSPNAG00000000844	msi2b	64	38.579
ENSPNAG00000021630	-	52	41.765	ENSPNAG00000016380	hnrnpdl	62	41.270
ENSPNAG00000021630	-	81	40.113	ENSPNAG00000028963	hnrnpabb	70	39.791
ENSPNAG00000021630	-	57	41.176	ENSPNAG00000019337	msi1	56	40.909
ENSPNAG00000021630	-	58	78.191	ENSPNAG00000007752	hnrnpa1a	77	78.125
ENSPNAG00000021630	-	58	77.297	ENSPNAG00000021384	HNRNPA3	52	79.006
ENSPNAG00000021630	-	87	35.955	ENSPNAG00000014957	msi2a	64	38.579
ENSPNAG00000021630	-	54	30.168	ENSPNAG00000022439	tardbpl	57	30.168
ENSPNAG00000021630	-	61	38.565	ENSPNAG00000016368	hnrnpd	57	42.308
ENSPNAG00000021630	-	52	41.304	ENSPNAG00000011639	dazap1	55	41.304
ENSPNAG00000021630	-	58	62.963	ENSPNAG00000018051	-	80	62.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000021630	-	60	82.143	ENSAPOG00000019369	-	56	85.106	Acanthochromis_polyacanthus
ENSPNAG00000021630	-	53	57.714	ENSACIG00000021815	-	90	56.684	Amphilophus_citrinellus
ENSPNAG00000021630	-	60	82.143	ENSAOCG00000005289	-	90	65.798	Amphiprion_ocellaris
ENSPNAG00000021630	-	60	82.143	ENSAPEG00000004179	-	90	65.798	Amphiprion_percula
ENSPNAG00000021630	-	56	59.748	ENSATEG00000003423	-	75	59.748	Anabas_testudineus
ENSPNAG00000021630	-	60	80.711	ENSATEG00000022918	hnrnpa1a	92	81.122	Anabas_testudineus
ENSPNAG00000021630	-	56	86.413	ENSACLG00000006940	-	91	61.934	Astatotilapia_calliptera
ENSPNAG00000021630	-	55	61.582	ENSAMXG00000037730	-	55	60.638	Astyanax_mexicanus
ENSPNAG00000021630	-	57	88.710	ENSAMXG00000006296	hnrnpa1a	60	82.511	Astyanax_mexicanus
ENSPNAG00000021630	-	94	60.518	ENSCSEG00000007589	hnrnpa1a	70	81.481	Cynoglossus_semilaevis
ENSPNAG00000021630	-	57	52.174	ENSCSEG00000014051	-	75	52.174	Cynoglossus_semilaevis
ENSPNAG00000021630	-	91	65.179	ENSCVAG00000012637	hnrnpa1a	55	85.027	Cyprinodon_variegatus
ENSPNAG00000021630	-	52	77.202	ENSDARG00000011020	hnrnpa1a	86	60.896	Danio_rerio
ENSPNAG00000021630	-	60	55.497	ENSDORG00000026425	-	55	54.922	Dipodomys_ordii
ENSPNAG00000021630	-	57	81.283	ENSELUG00000007372	-	63	73.973	Esox_lucius
ENSPNAG00000021630	-	55	60.112	ENSGMOG00000020353	-	97	58.730	Gadus_morhua
ENSPNAG00000021630	-	70	45.852	ENSGAFG00000016803	-	53	56.250	Gambusia_affinis
ENSPNAG00000021630	-	91	65.476	ENSGAFG00000007751	-	55	85.561	Gambusia_affinis
ENSPNAG00000021630	-	56	86.413	ENSHBUG00000005647	hnrnpa1a	56	86.631	Haplochromis_burtoni
ENSPNAG00000021630	-	70	68.722	ENSIPUG00000002023	hnrnpa1a	75	79.330	Ictalurus_punctatus
ENSPNAG00000021630	-	60	89.266	ENSIPUG00000022440	-	76	89.266	Ictalurus_punctatus
ENSPNAG00000021630	-	56	62.147	ENSIPUG00000001991	-	80	60.963	Ictalurus_punctatus
ENSPNAG00000021630	-	57	84.492	ENSKMAG00000020859	-	57	83.770	Kryptolebias_marmoratus
ENSPNAG00000021630	-	57	68.783	ENSMFAG00000028351	-	61	63.594	Macaca_fascicularis
ENSPNAG00000021630	-	57	84.492	ENSMAMG00000007606	-	91	63.438	Mastacembelus_armatus
ENSPNAG00000021630	-	56	86.413	ENSMZEG00005027173	hnrnpa1a	56	86.631	Maylandia_zebra
ENSPNAG00000021630	-	57	82.353	ENSMMOG00000008251	hnrnpa1a	86	76.147	Mola_mola
ENSPNAG00000021630	-	53	57.714	ENSMALG00000008886	-	90	55.851	Monopterus_albus
ENSPNAG00000021630	-	57	83.957	ENSMALG00000014091	hnrnpa1a	90	63.259	Monopterus_albus
ENSPNAG00000021630	-	59	57.754	ENSNBRG00000014469	-	86	57.754	Neolamprologus_brichardi
ENSPNAG00000021630	-	56	86.413	ENSNBRG00000018441	-	56	86.631	Neolamprologus_brichardi
ENSPNAG00000021630	-	57	85.027	ENSORLG00000008001	-	57	86.096	Oryzias_latipes
ENSPNAG00000021630	-	59	54.335	ENSORLG00000029240	-	99	53.409	Oryzias_latipes
ENSPNAG00000021630	-	57	86.517	ENSORLG00020006582	hnrnpa1a	87	83.957	Oryzias_latipes_hni
ENSPNAG00000021630	-	91	41.196	ENSORLG00020006043	-	61	51.445	Oryzias_latipes_hni
ENSPNAG00000021630	-	59	54.335	ENSORLG00020022498	-	89	54.335	Oryzias_latipes_hni
ENSPNAG00000021630	-	57	85.027	ENSORLG00015022294	-	57	86.096	Oryzias_latipes_hsok
ENSPNAG00000021630	-	57	85.484	ENSOMEG00000015959	-	57	86.096	Oryzias_melastigma
ENSPNAG00000021630	-	55	57.225	ENSPMGG00000016392	-	93	55.556	Periophthalmus_magnuspinnatus
ENSPNAG00000021630	-	57	84.066	ENSPMGG00000011804	hnrnpa1a	70	82.447	Periophthalmus_magnuspinnatus
ENSPNAG00000021630	-	92	59.672	ENSPFOG00000001825	-	55	85.561	Poecilia_formosa
ENSPNAG00000021630	-	92	59.672	ENSPMEG00000002425	-	55	85.561	Poecilia_mexicana
ENSPNAG00000021630	-	59	57.754	ENSPNYG00000020729	-	94	57.754	Pundamilia_nyererei
ENSPNAG00000021630	-	57	84.270	ENSSMAG00000004641	hnrnpa1a	60	83.422	Scophthalmus_maximus
ENSPNAG00000021630	-	56	57.471	ENSSMAG00000010246	-	83	56.452	Scophthalmus_maximus
ENSPNAG00000021630	-	56	59.639	ENSSMAG00000010279	-	93	59.639	Scophthalmus_maximus
ENSPNAG00000021630	-	56	59.538	ENSSDUG00000002431	-	89	59.538	Seriola_dumerili
ENSPNAG00000021630	-	57	86.441	ENSSDUG00000013908	hnrnpa1a	86	84.239	Seriola_dumerili
ENSPNAG00000021630	-	78	70.196	ENSSLDG00000003718	hnrnpa1a	82	83.237	Seriola_lalandi_dorsalis
ENSPNAG00000021630	-	59	83.246	ENSSPAG00000018518	-	57	84.574	Stegastes_partitus
ENSPNAG00000021630	-	57	80.749	ENSTRUG00000020491	-	57	81.818	Takifugu_rubripes
ENSPNAG00000021630	-	70	49.402	ENSTNIG00000007398	-	68	61.017	Tetraodon_nigroviridis
ENSPNAG00000021630	-	78	68.359	ENSXCOG00000009001	-	84	82.653	Xiphophorus_couchianus
ENSPNAG00000021630	-	92	60.000	ENSXMAG00000008076	-	55	86.096	Xiphophorus_maculatus