EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000021666 (Gene tree)
Gene ID
108442291
Gene Symbol
pabpn1l
Alias
-
Full Name
poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
10555 bases
Position
chrKV575749.1:157864-168418
Accession
108442291
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000015640RRM_1PF00076.223.3e-1611
ENSPNAP00000015616RRM_1PF00076.223.4e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000023904-952XM_017722267ENSPNAP00000015616206 (aa)XP_017577756UPI0008148E81
ENSPNAT00000023862-943XM_017722268ENSPNAP00000015640203 (aa)XP_017577757UPI00081447F3
Gene Model
Click here to download ENSPNAG00000021666's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021666's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000021666pabpn1l8470.760ENSPNAG00000023526pabpn18863.285
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000021666pabpn1l8965.445ENSG00000258643BCL2L2-PABPN15763.684Homo_sapiens
ENSPNAG00000021666pabpn1l9464.179ENSG00000100836PABPN110062.011Homo_sapiens
ENSPNAG00000021666pabpn1l9565.641ENSAPOG00000016425pabpn18862.319Acanthochromis_polyacanthus
ENSPNAG00000021666pabpn1l8965.445ENSAMEG00000007048BCL2L2-PABPN110063.684Ailuropoda_melanoleuca
ENSPNAG00000021666pabpn1l8467.630ENSACIG00000021744pabpn110062.921Amphilophus_citrinellus
ENSPNAG00000021666pabpn1l8469.591ENSAOCG00000015805pabpn18862.319Amphiprion_ocellaris
ENSPNAG00000021666pabpn1l8469.591ENSAPEG00000009623pabpn18862.319Amphiprion_percula
ENSPNAG00000021666pabpn1l8469.591ENSATEG00000020531pabpn18862.319Anabas_testudineus
ENSPNAG00000021666pabpn1l8962.755ENSACAG00000006185-5073.239Anolis_carolinensis
ENSPNAG00000021666pabpn1l9464.179ENSANAG00000024513-7262.500Aotus_nancymaae
ENSPNAG00000021666pabpn1l8467.241ENSACLG00000016374pabpn15667.081Astatotilapia_calliptera
ENSPNAG00000021666pabpn1l9565.979ENSAMXG00000000452pabpn110064.246Astyanax_mexicanus
ENSPNAG00000021666pabpn1l9065.803ENSBTAG00000053753-7163.542Bos_taurus
ENSPNAG00000021666pabpn1l9163.636ENSBTAG00000050594-6368.519Bos_taurus
ENSPNAG00000021666pabpn1l9464.179ENSBTAG00000006884PABPN16562.500Bos_taurus
ENSPNAG00000021666pabpn1l7550.323WBGene00003904pabp-27551.613Caenorhabditis_elegans
ENSPNAG00000021666pabpn1l7561.963ENSCJAG00000004407-8960.335Callithrix_jacchus
ENSPNAG00000021666pabpn1l9464.179ENSCJAG00000007960-7462.500Callithrix_jacchus
ENSPNAG00000021666pabpn1l9464.179ENSCAFG00000011482PABPN16562.500Canis_familiaris
ENSPNAG00000021666pabpn1l9464.179ENSCAFG00020006651-6562.500Canis_lupus_dingo
ENSPNAG00000021666pabpn1l9464.179ENSCAFG00020007298-6562.500Canis_lupus_dingo
ENSPNAG00000021666pabpn1l9464.179ENSCHIG00000012184PABPN16562.500Capra_hircus
ENSPNAG00000021666pabpn1l8965.445ENSTSYG00000033996BCL2L2-PABPN110062.011Carlito_syrichta
ENSPNAG00000021666pabpn1l6173.171ENSCAPG00000009461-7081.633Cavia_aperea
ENSPNAG00000021666pabpn1l9464.677ENSCPOG00000025574PABPN16563.000Cavia_porcellus
ENSPNAG00000021666pabpn1l9464.179ENSCCAG00000033954BCL2L2-PABPN17462.500Cebus_capucinus
ENSPNAG00000021666pabpn1l9464.179ENSCATG00000038536BCL2L2-PABPN17462.500Cercocebus_atys
ENSPNAG00000021666pabpn1l6868.707ENSCLAG00000012423PABPN15566.438Chinchilla_lanigera
ENSPNAG00000021666pabpn1l9462.687ENSCSAG00000016036PABPN16561.000Chlorocebus_sabaeus
ENSPNAG00000021666pabpn1l8958.247ENSCHOG00000004798BCL2L2-PABPN18156.186Choloepus_hoffmanni
ENSPNAG00000021666pabpn1l6870.068ENSCPBG00000026060-10061.453Chrysemys_picta_bellii
ENSPNAG00000021666pabpn1l9057.297ENSCING00000012468-8057.297Ciona_intestinalis
ENSPNAG00000021666pabpn1l8454.971ENSCSAVG00000002001-10054.971Ciona_savignyi
ENSPNAG00000021666pabpn1l8965.445ENSCANG00000009750BCL2L2-PABPN110062.011Colobus_angolensis_palliatus
ENSPNAG00000021666pabpn1l9457.286ENSCANG00000030980-7155.556Colobus_angolensis_palliatus
ENSPNAG00000021666pabpn1l9464.179ENSCGRG00001019696Pabpn110062.011Cricetulus_griseus_chok1gshd
ENSPNAG00000021666pabpn1l7272.973ENSCGRG00000011102Pabpn110062.011Cricetulus_griseus_crigri
ENSPNAG00000021666pabpn1l8469.591ENSCSEG00000008774pabpn18862.319Cynoglossus_semilaevis
ENSPNAG00000021666pabpn1l7871.069ENSCVAG00000003152pabpn18859.903Cyprinodon_variegatus
ENSPNAG00000021666pabpn1l8470.175ENSDARG00000045373pabpn18862.802Danio_rerio
ENSPNAG00000021666pabpn1l8769.492ENSDARG00000087996pabpn1l9666.038Danio_rerio
ENSPNAG00000021666pabpn1l9464.179ENSDNOG00000023682PABPN16562.500Dasypus_novemcinctus
ENSPNAG00000021666pabpn1l9464.677ENSDORG00000028966-6563.000Dipodomys_ordii
ENSPNAG00000021666pabpn1l6665.926ENSDORG00000023928-9065.649Dipodomys_ordii
ENSPNAG00000021666pabpn1l9955.122FBgn0005648Pabp26361.972Drosophila_melanogaster
ENSPNAG00000021666pabpn1l9960.748ENSEBUG00000002322pabpn19257.277Eptatretus_burgeri
ENSPNAG00000021666pabpn1l9464.179ENSEASG00005011716PABPN16562.500Equus_asinus_asinus
ENSPNAG00000021666pabpn1l9263.959ENSECAG00000011652PABPN15171.053Equus_caballus
ENSPNAG00000021666pabpn1l9462.000ENSEEUG00000012973-5269.079Erinaceus_europaeus
ENSPNAG00000021666pabpn1l9861.682ENSELUG00000022654pabpn18763.462Esox_lucius
ENSPNAG00000021666pabpn1l9464.179ENSFCAG00000031922PABPN16562.500Felis_catus
ENSPNAG00000021666pabpn1l7563.804ENSFDAG00000018381BCL2L2-PABPN110062.011Fukomys_damarensis
ENSPNAG00000021666pabpn1l8669.540ENSFHEG00000007215pabpn18860.194Fundulus_heteroclitus
ENSPNAG00000021666pabpn1l8170.732ENSGMOG00000003922pabpn15570.886Gadus_morhua
ENSPNAG00000021666pabpn1l7273.154ENSGALG00000052930-5862.189Gallus_gallus
ENSPNAG00000021666pabpn1l7871.069ENSGAFG00000017099pabpn18862.201Gambusia_affinis
ENSPNAG00000021666pabpn1l8370.175ENSGACG00000002167pabpn18958.824Gasterosteus_aculeatus
ENSPNAG00000021666pabpn1l9464.179ENSGGOG00000022683-7462.500Gorilla_gorilla
ENSPNAG00000021666pabpn1l9160.104ENSGGOG00000039675-7157.812Gorilla_gorilla
ENSPNAG00000021666pabpn1l9452.500ENSGGOG00000025919-7260.305Gorilla_gorilla
ENSPNAG00000021666pabpn1l8469.591ENSHBUG00000019523pabpn18861.836Haplochromis_burtoni
ENSPNAG00000021666pabpn1l6857.343ENSHGLG00000009842-10053.977Heterocephalus_glaber_female
ENSPNAG00000021666pabpn1l9458.031ENSHGLG00000018588-6656.701Heterocephalus_glaber_female
ENSPNAG00000021666pabpn1l9464.677ENSHGLG00000002927-8973.944Heterocephalus_glaber_female
ENSPNAG00000021666pabpn1l8168.862ENSHGLG00100006673-8973.944Heterocephalus_glaber_male
ENSPNAG00000021666pabpn1l9458.031ENSHGLG00100015565-6856.701Heterocephalus_glaber_male
ENSPNAG00000021666pabpn1l7560.000ENSHGLG00100018935-10059.887Heterocephalus_glaber_male
ENSPNAG00000021666pabpn1l8469.591ENSHCOG00000004655pabpn18862.319Hippocampus_comes
ENSPNAG00000021666pabpn1l8470.175ENSIPUG00000008085PABPN18862.802Ictalurus_punctatus
ENSPNAG00000021666pabpn1l8371.006ENSIPUG00000000180-8863.184Ictalurus_punctatus
ENSPNAG00000021666pabpn1l7563.804ENSSTOG00000029847BCL2L2-PABPN110062.011Ictidomys_tridecemlineatus
ENSPNAG00000021666pabpn1l7563.804ENSJJAG00000023507Gm2052110062.011Jaculus_jaculus
ENSPNAG00000021666pabpn1l8470.175ENSKMAG00000018748pabpn18858.654Kryptolebias_marmoratus
ENSPNAG00000021666pabpn1l9565.641ENSLBEG00000027266pabpn18862.319Labrus_bergylta
ENSPNAG00000021666pabpn1l7670.701ENSLACG00000000646pabpn16272.727Latimeria_chalumnae
ENSPNAG00000021666pabpn1l9466.154ENSLOCG00000000796pabpn15771.795Lepisosteus_oculatus
ENSPNAG00000021666pabpn1l9475.258ENSLOCG00000004694pabpn1l9176.289Lepisosteus_oculatus
ENSPNAG00000021666pabpn1l6868.027ENSLAFG00000031227-9765.753Loxodonta_africana
ENSPNAG00000021666pabpn1l6763.380ENSMFAG00000031355-9961.268Macaca_fascicularis
ENSPNAG00000021666pabpn1l8965.445ENSMFAG00000032183BCL2L2-PABPN110062.011Macaca_fascicularis
ENSPNAG00000021666pabpn1l9159.794ENSMMUG00000048382-6657.000Macaca_mulatta
ENSPNAG00000021666pabpn1l10060.000ENSMMUG00000014747BCL2L2-PABPN110065.753Macaca_mulatta
ENSPNAG00000021666pabpn1l9464.179ENSMNEG00000045065BCL2L2-PABPN17462.500Macaca_nemestrina
ENSPNAG00000021666pabpn1l8455.932ENSMNEG00000035750-9961.268Macaca_nemestrina
ENSPNAG00000021666pabpn1l8455.747ENSMLEG00000034623-9961.594Mandrillus_leucophaeus
ENSPNAG00000021666pabpn1l8965.445ENSMLEG00000043862BCL2L2-PABPN110062.011Mandrillus_leucophaeus
ENSPNAG00000021666pabpn1l9565.641ENSMAMG00000007979pabpn15669.620Mastacembelus_armatus
ENSPNAG00000021666pabpn1l8469.591ENSMZEG00005011904pabpn15569.620Maylandia_zebra
ENSPNAG00000021666pabpn1l9464.179ENSMAUG00000007383Gm205216762.500Mesocricetus_auratus
ENSPNAG00000021666pabpn1l9464.179ENSMICG00000010002BCL2L2-PABPN17462.500Microcebus_murinus
ENSPNAG00000021666pabpn1l9464.179ENSMOCG00000018557Gm205218673.239Microtus_ochrogaster
ENSPNAG00000021666pabpn1l8469.591ENSMMOG00000005405pabpn18862.319Mola_mola
ENSPNAG00000021666pabpn1l9362.312ENSMODG00000004535-6561.111Monodelphis_domestica
ENSPNAG00000021666pabpn1l9565.641ENSMALG00000019612pabpn15569.620Monopterus_albus
ENSPNAG00000021666pabpn1l9464.677MGP_CAROLIEiJ_G0019277Pabpn19667.089Mus_caroli
ENSPNAG00000021666pabpn1l8965.969MGP_CAROLIEiJ_G0019276Gm205215764.211Mus_caroli
ENSPNAG00000021666pabpn1l8965.969ENSMUSG00000092232Gm205215764.211Mus_musculus
ENSPNAG00000021666pabpn1l9464.677ENSMUSG00000022194Pabpn19667.089Mus_musculus
ENSPNAG00000021666pabpn1l9464.677MGP_PahariEiJ_G0030295Pabpn110073.810Mus_pahari
ENSPNAG00000021666pabpn1l8965.969MGP_PahariEiJ_G0030294Gm205215764.211Mus_pahari
ENSPNAG00000021666pabpn1l9464.677MGP_SPRETEiJ_G0020166Pabpn19667.089Mus_spretus
ENSPNAG00000021666pabpn1l8965.969MGP_SPRETEiJ_G0020165Gm205215764.211Mus_spretus
ENSPNAG00000021666pabpn1l6766.906ENSMPUG00000006775-7771.756Mustela_putorius_furo
ENSPNAG00000021666pabpn1l9759.906ENSMLUG00000012452-6760.386Myotis_lucifugus
ENSPNAG00000021666pabpn1l9761.650ENSMLUG00000028677-7460.000Myotis_lucifugus
ENSPNAG00000021666pabpn1l8964.398ENSMLUG00000003800-10062.632Myotis_lucifugus
ENSPNAG00000021666pabpn1l8965.445ENSNGAG00000019529Gm205215763.684Nannospalax_galili
ENSPNAG00000021666pabpn1l8469.591ENSNBRG00000023955pabpn110062.921Neolamprologus_brichardi
ENSPNAG00000021666pabpn1l6754.015ENSNLEG00000035292-9550.365Nomascus_leucogenys
ENSPNAG00000021666pabpn1l9759.391ENSNLEG00000030598-7557.868Nomascus_leucogenys
ENSPNAG00000021666pabpn1l9464.179ENSNLEG00000015007-7162.500Nomascus_leucogenys
ENSPNAG00000021666pabpn1l8457.542ENSODEG00000011555-9555.618Octodon_degus
ENSPNAG00000021666pabpn1l9463.542ENSODEG00000003739-6760.938Octodon_degus
ENSPNAG00000021666pabpn1l9464.677ENSODEG00000002083BCL2L2-PABPN16563.000Octodon_degus
ENSPNAG00000021666pabpn1l8469.591ENSONIG00000008112pabpn15569.620Oreochromis_niloticus
ENSPNAG00000021666pabpn1l6869.388ENSOANG00000009218-10066.438Ornithorhynchus_anatinus
ENSPNAG00000021666pabpn1l9465.174ENSOCUG00000016174PABPN17363.500Oryctolagus_cuniculus
ENSPNAG00000021666pabpn1l9362.562ENSORLG00000027900pabpn16769.620Oryzias_latipes
ENSPNAG00000021666pabpn1l8469.591ENSORLG00020004681pabpn15469.620Oryzias_latipes_hni
ENSPNAG00000021666pabpn1l8469.591ENSORLG00015000018pabpn18862.319Oryzias_latipes_hsok
ENSPNAG00000021666pabpn1l9864.677ENSOMEG00000016618pabpn15969.620Oryzias_melastigma
ENSPNAG00000021666pabpn1l9464.179ENSOGAG00000008710PABPN16562.500Otolemur_garnettii
ENSPNAG00000021666pabpn1l8965.445ENSOARG00000019336BCL2L2-PABPN15263.684Ovis_aries
ENSPNAG00000021666pabpn1l8965.445ENSPPAG00000028984BCL2L2-PABPN17771.756Pan_paniscus
ENSPNAG00000021666pabpn1l7556.250ENSPPAG00000039421-10054.802Pan_paniscus
ENSPNAG00000021666pabpn1l9464.179ENSPPRG00000010567PABPN16562.500Panthera_pardus
ENSPNAG00000021666pabpn1l7563.804ENSPTIG00000001063BCL2L2-PABPN110062.011Panthera_tigris_altaica
ENSPNAG00000021666pabpn1l9464.179ENSPTRG00000006167BCL2L27462.500Pan_troglodytes
ENSPNAG00000021666pabpn1l9157.812ENSPTRG00000047273-7155.729Pan_troglodytes
ENSPNAG00000021666pabpn1l9464.179ENSPANG00000021100BCL2L2-PABPN17462.500Papio_anubis
ENSPNAG00000021666pabpn1l9157.949ENSPANG00000023326-9961.268Papio_anubis
ENSPNAG00000021666pabpn1l8470.760ENSPKIG00000008144-6963.235Paramormyrops_kingsleyae
ENSPNAG00000021666pabpn1l9862.500ENSPKIG00000018052pabpn18862.500Paramormyrops_kingsleyae
ENSPNAG00000021666pabpn1l9378.836ENSPKIG00000008340pabpn1l9279.894Paramormyrops_kingsleyae
ENSPNAG00000021666pabpn1l5572.973ENSPSIG00000011959-7173.469Pelodiscus_sinensis
ENSPNAG00000021666pabpn1l9565.128ENSPMGG00000022027pabpn15868.987Periophthalmus_magnuspinnatus
ENSPNAG00000021666pabpn1l9464.179ENSPEMG00000008332Gm205218573.239Peromyscus_maniculatus_bairdii
ENSPNAG00000021666pabpn1l7272.109ENSPMAG00000006212pabpn18362.312Petromyzon_marinus
ENSPNAG00000021666pabpn1l9463.184ENSPCIG00000027751-6562.000Phascolarctos_cinereus
ENSPNAG00000021666pabpn1l7871.069ENSPFOG00000010351pabpn18860.766Poecilia_formosa
ENSPNAG00000021666pabpn1l7970.186ENSPLAG00000022696pabpn15569.620Poecilia_latipinna
ENSPNAG00000021666pabpn1l7871.069ENSPMEG00000020856pabpn18860.766Poecilia_mexicana
ENSPNAG00000021666pabpn1l7970.186ENSPREG00000011278pabpn18861.244Poecilia_reticulata
ENSPNAG00000021666pabpn1l8666.667ENSPPYG00000005663PABPN15471.053Pongo_abelii
ENSPNAG00000021666pabpn1l8656.180ENSPCAG00000005902PABPN15258.824Procavia_capensis
ENSPNAG00000021666pabpn1l9464.179ENSPCOG00000028047BCL2L2-PABPN17462.500Propithecus_coquereli
ENSPNAG00000021666pabpn1l9463.235ENSPVAG00000005270PABPN16562.000Pteropus_vampyrus
ENSPNAG00000021666pabpn1l8469.591ENSPNYG00000013182pabpn18861.836Pundamilia_nyererei
ENSPNAG00000021666pabpn1l9464.677ENSRNOG00000042195Pabpn16663.000Rattus_norvegicus
ENSPNAG00000021666pabpn1l9159.067ENSRBIG00000039547-7256.061Rhinopithecus_bieti
ENSPNAG00000021666pabpn1l9457.500ENSRBIG00000042811-6263.816Rhinopithecus_bieti
ENSPNAG00000021666pabpn1l9454.271ENSRROG00000036409-6152.000Rhinopithecus_roxellana
ENSPNAG00000021666pabpn1l8168.263ENSRROG00000045535BCL2L2-PABPN110062.011Rhinopithecus_roxellana
ENSPNAG00000021666pabpn1l9159.585ENSRROG00000040409-7256.566Rhinopithecus_roxellana
ENSPNAG00000021666pabpn1l8961.275ENSSBOG00000026930BCL2L2-PABPN17771.756Saimiri_boliviensis_boliviensis
ENSPNAG00000021666pabpn1l8964.398ENSSHAG00000014841-8763.158Sarcophilus_harrisii
ENSPNAG00000021666pabpn1l9455.721ENSSHAG00000007707-8453.266Sarcophilus_harrisii
ENSPNAG00000021666pabpn1l9565.128ENSSFOG00015012565pabpn19262.802Scleropages_formosus
ENSPNAG00000021666pabpn1l8981.967ENSSFOG00015015833pabpn1l8481.967Scleropages_formosus
ENSPNAG00000021666pabpn1l8470.760ENSSFOG00015014718pabpn18861.353Scleropages_formosus
ENSPNAG00000021666pabpn1l9565.641ENSSMAG00000020157pabpn18862.319Scophthalmus_maximus
ENSPNAG00000021666pabpn1l9565.641ENSSDUG00000020582pabpn15569.620Seriola_dumerili
ENSPNAG00000021666pabpn1l8469.591ENSSLDG00000007118pabpn18862.319Seriola_lalandi_dorsalis
ENSPNAG00000021666pabpn1l6173.228ENSSPUG00000018308-10061.453Sphenodon_punctatus
ENSPNAG00000021666pabpn1l9564.796ENSSPAG00000021658pabpn18859.615Stegastes_partitus
ENSPNAG00000021666pabpn1l9464.179ENSSSCG00000002023PABPN16562.500Sus_scrofa
ENSPNAG00000021666pabpn1l5254.630ENSSSCG00000038472-7554.630Sus_scrofa
ENSPNAG00000021666pabpn1l9651.795ENSSSCG00000034805-6258.710Sus_scrofa
ENSPNAG00000021666pabpn1l9565.128ENSTRUG00000023664pabpn18861.836Takifugu_rubripes
ENSPNAG00000021666pabpn1l9565.128ENSTNIG00000005369pabpn17368.987Tetraodon_nigroviridis
ENSPNAG00000021666pabpn1l9464.179ENSUAMG00000024460PABPN16562.500Ursus_americanus
ENSPNAG00000021666pabpn1l8965.445ENSUMAG00000014288BCL2L2-PABPN15763.684Ursus_maritimus
ENSPNAG00000021666pabpn1l8965.445ENSVVUG00000019912BCL2L2-PABPN17463.684Vulpes_vulpes
ENSPNAG00000021666pabpn1l9363.265ENSXETG00000014597pabpn16763.131Xenopus_tropicalis
ENSPNAG00000021666pabpn1l5081.188ENSXCOG00000005158pabpn18765.101Xiphophorus_couchianus
ENSPNAG00000021666pabpn1l7871.069ENSXMAG00000006196pabpn18860.766Xiphophorus_maculatus

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