EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000021707 (Gene tree)
Gene ID: 108438734
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 1056 bases
Position: chrKV575294.1:2073879-2074934
Accession: 108438734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000015655	RRS1	PF04939.12	8.4e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000023907	-	1056	XM_017716740	ENSPNAP00000015655	351 (aa)	XP_017572229	UPI0008149096

Gene Model

Click here to download ENSPNAG00000021707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000021707	rrs1	89	63.924	ENSG00000179041	RRS1	80	65.753	Homo_sapiens
ENSPNAG00000021707	rrs1	89	74.522	ENSATEG00000011743	rrs1	83	75.945	Anabas_testudineus
ENSPNAG00000021707	rrs1	92	63.804	ENSANAG00000018116	RRS1	80	66.438	Aotus_nancymaae
ENSPNAG00000021707	rrs1	100	82.621	ENSAMXG00000037893	rrs1	76	86.897	Astyanax_mexicanus
ENSPNAG00000021707	rrs1	90	65.000	ENSBTAG00000016716	RRS1	80	66.781	Bos_taurus
ENSPNAG00000021707	rrs1	79	43.793	WBGene00007617	rrbs-1	79	44.981	Caenorhabditis_elegans
ENSPNAG00000021707	rrs1	92	63.804	ENSCJAG00000022034	RRS1	80	66.438	Callithrix_jacchus
ENSPNAG00000021707	rrs1	86	66.118	ENSCAFG00000007313	RRS1	80	66.438	Canis_familiaris
ENSPNAG00000021707	rrs1	86	66.118	ENSCAFG00020016049	-	80	66.438	Canis_lupus_dingo
ENSPNAG00000021707	rrs1	86	66.118	ENSCAFG00020020365	-	80	66.438	Canis_lupus_dingo
ENSPNAG00000021707	rrs1	89	64.557	ENSCHIG00000009141	RRS1	80	66.438	Capra_hircus
ENSPNAG00000021707	rrs1	89	63.777	ENSCPOG00000000647	RRS1	82	66.781	Cavia_porcellus
ENSPNAG00000021707	rrs1	100	60.331	ENSCCAG00000032186	RRS1	98	60.056	Cebus_capucinus
ENSPNAG00000021707	rrs1	89	64.557	ENSCATG00000016944	RRS1	80	66.438	Cercocebus_atys
ENSPNAG00000021707	rrs1	100	60.056	ENSCSAG00000018552	RRS1	80	66.096	Chlorocebus_sabaeus
ENSPNAG00000021707	rrs1	89	64.873	ENSCHOG00000002455	RRS1	80	66.781	Choloepus_hoffmanni
ENSPNAG00000021707	rrs1	95	55.882	ENSCPBG00000021374	RRS1	85	60.067	Chrysemys_picta_bellii
ENSPNAG00000021707	rrs1	88	52.885	ENSCING00000002177	-	88	55.594	Ciona_intestinalis
ENSPNAG00000021707	rrs1	95	50.595	ENSCSAVG00000011819	-	88	54.895	Ciona_savignyi
ENSPNAG00000021707	rrs1	90	64.798	ENSCANG00000012718	RRS1	80	66.438	Colobus_angolensis_palliatus
ENSPNAG00000021707	rrs1	97	63.112	ENSCGRG00001002391	-	80	66.438	Cricetulus_griseus_chok1gshd
ENSPNAG00000021707	rrs1	95	62.798	ENSCGRG00001015575	-	84	66.438	Cricetulus_griseus_chok1gshd
ENSPNAG00000021707	rrs1	86	61.258	ENSCSEG00000014750	rrs1	79	61.512	Cynoglossus_semilaevis
ENSPNAG00000021707	rrs1	86	65.017	ENSCVAG00000017878	rrs1	82	64.948	Cyprinodon_variegatus
ENSPNAG00000021707	rrs1	85	78.333	ENSDARG00000003941	rrs1	84	79.038	Danio_rerio
ENSPNAG00000021707	rrs1	86	66.118	ENSDNOG00000017900	RRS1	79	66.438	Dasypus_novemcinctus
ENSPNAG00000021707	rrs1	62	65.000	ENSDORG00000026331	Rrs1	74	67.857	Dipodomys_ordii
ENSPNAG00000021707	rrs1	92	43.804	FBgn0052409	CG32409	82	47.079	Drosophila_melanogaster
ENSPNAG00000021707	rrs1	57	65.174	ENSETEG00000000935	-	55	65.174	Echinops_telfairi
ENSPNAG00000021707	rrs1	83	59.044	ENSEBUG00000013506	rrs1	96	58.451	Eptatretus_burgeri
ENSPNAG00000021707	rrs1	89	64.873	ENSEASG00005001691	RRS1	80	66.781	Equus_asinus_asinus
ENSPNAG00000021707	rrs1	94	63.772	ENSECAG00000004492	RRS1	87	66.781	Equus_caballus
ENSPNAG00000021707	rrs1	89	63.924	ENSEEUG00000013719	RRS1	80	66.096	Erinaceus_europaeus
ENSPNAG00000021707	rrs1	86	65.132	ENSFCAG00000014332	RRS1	80	65.753	Felis_catus
ENSPNAG00000021707	rrs1	83	58.472	ENSGALG00000030890	RRS1	84	58.333	Gallus_gallus
ENSPNAG00000021707	rrs1	85	72.425	ENSGACG00000002969	rrs1	82	72.852	Gasterosteus_aculeatus
ENSPNAG00000021707	rrs1	95	55.587	ENSGAGG00000023718	RRS1	97	54.441	Gopherus_agassizii
ENSPNAG00000021707	rrs1	89	64.557	ENSGGOG00000026663	RRS1	80	66.438	Gorilla_gorilla
ENSPNAG00000021707	rrs1	92	64.110	ENSHGLG00000021423	RRS1	80	66.438	Heterocephalus_glaber_female
ENSPNAG00000021707	rrs1	92	64.110	ENSHGLG00100020640	RRS1	80	66.438	Heterocephalus_glaber_male
ENSPNAG00000021707	rrs1	99	68.820	ENSHCOG00000015358	rrs1	81	73.448	Hippocampus_comes
ENSPNAG00000021707	rrs1	90	72.785	ENSIPUG00000014412	rrs1	84	76.289	Ictalurus_punctatus
ENSPNAG00000021707	rrs1	100	61.157	ENSSTOG00000026310	RRS1	80	67.808	Ictidomys_tridecemlineatus
ENSPNAG00000021707	rrs1	79	58.633	ENSJJAG00000020395	-	81	58.633	Jaculus_jaculus
ENSPNAG00000021707	rrs1	86	65.132	ENSJJAG00000011507	-	80	66.096	Jaculus_jaculus
ENSPNAG00000021707	rrs1	92	72.222	ENSKMAG00000008238	rrs1	86	75.601	Kryptolebias_marmoratus
ENSPNAG00000021707	rrs1	84	76.094	ENSLACG00000004058	RRS1	88	76.289	Latimeria_chalumnae
ENSPNAG00000021707	rrs1	100	71.591	ENSLOCG00000017812	rrs1	85	76.976	Lepisosteus_oculatus
ENSPNAG00000021707	rrs1	89	64.241	ENSLAFG00000015405	RRS1	79	66.438	Loxodonta_africana
ENSPNAG00000021707	rrs1	100	60.335	ENSMFAG00000042747	RRS1	80	66.438	Macaca_fascicularis
ENSPNAG00000021707	rrs1	100	60.335	ENSMMUG00000000886	RRS1	80	66.438	Macaca_mulatta
ENSPNAG00000021707	rrs1	100	60.335	ENSMNEG00000011696	RRS1	80	66.438	Macaca_nemestrina
ENSPNAG00000021707	rrs1	89	64.557	ENSMLEG00000004794	RRS1	80	66.438	Mandrillus_leucophaeus
ENSPNAG00000021707	rrs1	85	74.161	ENSMZEG00005004349	RRS1	82	74.570	Maylandia_zebra
ENSPNAG00000021707	rrs1	98	63.897	ENSMAUG00000005392	Rrs1	80	67.808	Mesocricetus_auratus
ENSPNAG00000021707	rrs1	97	64.244	ENSMOCG00000015862	Rrs1	76	67.123	Microtus_ochrogaster
ENSPNAG00000021707	rrs1	89	62.696	ENSMODG00000024952	RRS1	80	64.505	Monodelphis_domestica
ENSPNAG00000021707	rrs1	97	63.663	MGP_CAROLIEiJ_G0013936	Rrs1	81	67.123	Mus_caroli
ENSPNAG00000021707	rrs1	97	63.663	ENSMUSG00000061024	Rrs1	80	67.123	Mus_musculus
ENSPNAG00000021707	rrs1	95	63.174	MGP_PahariEiJ_G0023883	Rrs1	80	66.096	Mus_pahari
ENSPNAG00000021707	rrs1	97	63.663	MGP_SPRETEiJ_G0014739	Rrs1	80	67.123	Mus_spretus
ENSPNAG00000021707	rrs1	97	62.500	ENSMPUG00000018626	RRS1	79	66.781	Mustela_putorius_furo
ENSPNAG00000021707	rrs1	93	63.720	ENSNGAG00000012904	Rrs1	80	66.438	Nannospalax_galili
ENSPNAG00000021707	rrs1	78	60.142	ENSNLEG00000027730	RRS1	72	66.516	Nomascus_leucogenys
ENSPNAG00000021707	rrs1	96	69.436	ENSONIG00000014187	rrs1	85	73.883	Oreochromis_niloticus
ENSPNAG00000021707	rrs1	95	62.388	ENSOANG00000012348	RRS1	79	65.188	Ornithorhynchus_anatinus
ENSPNAG00000021707	rrs1	89	65.495	ENSOCUG00000013490	RRS1	79	67.123	Oryctolagus_cuniculus
ENSPNAG00000021707	rrs1	89	63.057	ENSOMEG00000008525	rrs1	82	64.605	Oryzias_melastigma
ENSPNAG00000021707	rrs1	93	62.424	ENSOGAG00000001085	RRS1	80	65.411	Otolemur_garnettii
ENSPNAG00000021707	rrs1	86	61.513	ENSOARG00000017417	RRS1	78	61.644	Ovis_aries
ENSPNAG00000021707	rrs1	89	64.241	ENSPPAG00000024378	RRS1	80	66.096	Pan_paniscus
ENSPNAG00000021707	rrs1	89	64.217	ENSPPRG00000021408	RRS1	80	66.096	Panthera_pardus
ENSPNAG00000021707	rrs1	89	63.924	ENSPTRG00000030988	RRS1	80	65.753	Pan_troglodytes
ENSPNAG00000021707	rrs1	97	47.353	ENSPANG00000035974	RRS1	76	48.966	Papio_anubis
ENSPNAG00000021707	rrs1	99	68.857	ENSPKIG00000007953	rrs1	99	67.429	Paramormyrops_kingsleyae
ENSPNAG00000021707	rrs1	95	64.072	ENSPEMG00000014427	Rrs1	80	67.123	Peromyscus_maniculatus_bairdii
ENSPNAG00000021707	rrs1	86	63.279	ENSPCIG00000026695	RRS1	82	63.823	Phascolarctos_cinereus
ENSPNAG00000021707	rrs1	93	76.758	ENSPFOG00000020722	rrs1	90	79.381	Poecilia_formosa
ENSPNAG00000021707	rrs1	86	65.789	ENSPREG00000019960	rrs1	80	65.870	Poecilia_reticulata
ENSPNAG00000021707	rrs1	84	66.330	ENSPPYG00000018637	RRS1	98	66.438	Pongo_abelii
ENSPNAG00000021707	rrs1	92	64.724	ENSPCAG00000009115	RRS1	80	67.123	Procavia_capensis
ENSPNAG00000021707	rrs1	97	63.450	ENSRNOG00000007240	Rrs1	80	67.466	Rattus_norvegicus
ENSPNAG00000021707	rrs1	89	64.241	ENSRBIG00000009132	RRS1	80	66.096	Rhinopithecus_bieti
ENSPNAG00000021707	rrs1	89	64.241	ENSRROG00000013472	RRS1	80	66.096	Rhinopithecus_roxellana
ENSPNAG00000021707	rrs1	51	37.745	YOR294W	-	99	37.745	Saccharomyces_cerevisiae
ENSPNAG00000021707	rrs1	86	65.461	ENSSBOG00000012639	-	82	65.753	Saimiri_boliviensis_boliviensis
ENSPNAG00000021707	rrs1	86	65.461	ENSSBOG00000011006	-	82	65.753	Saimiri_boliviensis_boliviensis
ENSPNAG00000021707	rrs1	82	59.516	ENSSFOG00015015772	rrs1	78	59.364	Scleropages_formosus
ENSPNAG00000021707	rrs1	93	65.826	ENSSMAG00000015226	rrs1	78	75.352	Scophthalmus_maximus
ENSPNAG00000021707	rrs1	71	64.228	ENSSARG00000006976	RRS1	61	64.167	Sorex_araneus
ENSPNAG00000021707	rrs1	97	62.319	ENSSSCG00000006214	RRS1	80	66.438	Sus_scrofa
ENSPNAG00000021707	rrs1	87	73.290	ENSTRUG00000008796	rrs1	85	75.986	Takifugu_rubripes
ENSPNAG00000021707	rrs1	85	76.846	ENSTNIG00000004026	rrs1	86	76.976	Tetraodon_nigroviridis
ENSPNAG00000021707	rrs1	89	64.873	ENSTBEG00000014752	RRS1	80	66.781	Tupaia_belangeri
ENSPNAG00000021707	rrs1	97	62.791	ENSUAMG00000008502	RRS1	80	66.438	Ursus_americanus
ENSPNAG00000021707	rrs1	86	66.118	ENSVVUG00000018452	RRS1	80	66.438	Vulpes_vulpes
ENSPNAG00000021707	rrs1	85	78.523	ENSXCOG00000009809	rrs1	82	78.694	Xiphophorus_couchianus